RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 DEFB131BA0A096LNP1 70 aa7.28□□□□□ -1.24
RNF40-204ENST00000563683 LELP1Q5T871 98 aa7.28□□□□□ -1.24
RNF40-204ENST00000563683 SVEP1Q4LDE5 3571 aa7.28□□□□□ -1.24
RNF40-204ENST00000563683 UNC79Q9P2D8 2635 aa7.28□□□□□ -1.24
RNF40-204ENST00000563683 PRB2P02812 416 aaPredicted RBP7.27□□□□□ -1.24
RNF40-204ENST00000563683 C6orf223Q8N319 242 aa7.27□□□□□ -1.25
RNF40-204ENST00000563683 ITPR2Q14571 2701 aa7.26□□□□□ -1.25
RNF40-204ENST00000563683 C9orf129Q5T035 196 aaKnown RBP7.26□□□□□ -1.25
RNF40-204ENST00000563683 RMI2Q96E14 147 aa7.26□□□□□ -1.25
RNF40-204ENST00000563683 Q8N3U1 123 aa7.25□□□□□ -1.25
RNF40-204ENST00000563683 Q6ZQY7 126 aa7.25□□□□□ -1.25
RNF40-204ENST00000563683 FBN2P35556 2912 aa7.25□□□□□ -1.25
RNF40-204ENST00000563683 A0A1B0GUV1 79 aa7.25□□□□□ -1.25
RNF40-204ENST00000563683 CELA1Q9UNI1 258 aa7.25□□□□□ -1.25
RNF40-204ENST00000563683 CELSR2Q9HCU4 2923 aa7.24□□□□□ -1.25
RNF40-204ENST00000563683 COX7BP24311 80 aa7.24□□□□□ -1.25
RNF40-204ENST00000563683 TRAV23DV6A0A075B6W5 121 aa7.24□□□□□ -1.25
RNF40-204ENST00000563683 TRBV10-3A0A0K0K1G6 114 aa7.24□□□□□ -1.25
RNF40-204ENST00000563683 GIG44P09565 113 aaPredicted RBP7.24□□□□□ -1.25
RNF40-204ENST00000563683 ETDCA0A1B0GVM5 59 aa7.23□□□□□ -1.25
RNF40-204ENST00000563683 C4orf26Q17RF5 130 aa7.23□□□□□ -1.25
RNF40-204ENST00000563683 F8WEM9 126 aa7.23□□□□□ -1.25
RNF40-204ENST00000563683 UBE2BP63146 152 aa7.23□□□□□ -1.25
RNF40-204ENST00000563683 HRCT1Q6UXD1 115 aa7.23□□□□□ -1.25
RNF40-204ENST00000563683 KRTAP1-3Q8IUG1 177 aa7.23□□□□□ -1.25
RNF40-204ENST00000563683 X6R8D5 127 aa7.23□□□□□ -1.25
RNF40-204ENST00000563683 NANOS2P60321 138 aaKnown RBP7.23□□□□□ -1.25
RNF40-204ENST00000563683 CELSR1Q9NYQ6 3014 aa7.23□□□□□ -1.25
RNF40-204ENST00000563683 Q6ZTC4 211 aa7.22□□□□□ -1.25
RNF40-204ENST00000563683 FAM236DA0A1B0GTK5 79 aa7.22□□□□□ -1.25
RNF40-204ENST00000563683 FAM236CP0DP71 79 aa7.22□□□□□ -1.25
RNF40-204ENST00000563683 OXTP01178 125 aa7.21□□□□□ -1.25
RNF40-204ENST00000563683 Q5XG85 94 aa7.21□□□□□ -1.25
RNF40-204ENST00000563683 BCE1O60756 84 aa7.21□□□□□ -1.26
RNF40-204ENST00000563683 COX17Q14061 63 aa7.21□□□□□ -1.26
RNF40-204ENST00000563683 ENHOQ6UWT2 76 aa7.21□□□□□ -1.26
RNF40-204ENST00000563683 CSNK1G2-AS1Q8NCQ2 148 aa7.21□□□□□ -1.26
RNF40-204ENST00000563683 A0A0J9YWU9 116 aa7.21□□□□□ -1.26
RNF40-204ENST00000563683 SCXQ7RTU7 201 aa7.21□□□□□ -1.26
RNF40-204ENST00000563683 C20orf197Q8N268 126 aa7.21□□□□□ -1.26
RNF40-204ENST00000563683 BSNQ9UPA5 3926 aa7.21□□□□□ -1.26
RNF40-204ENST00000563683 WFDC9Q8NEX5 89 aa7.2□□□□□ -1.26
RNF40-204ENST00000563683 CR1P17927 2039 aa7.2□□□□□ -1.26
RNF40-204ENST00000563683 C19orf73Q9NVV2 129 aa7.2□□□□□ -1.26
RNF40-204ENST00000563683 WFDC10BQ8IUB3 73 aa7.2□□□□□ -1.26
RNF40-204ENST00000563683 LINC00167Q96N53 147 aa7.2□□□□□ -1.26
RNF40-204ENST00000563683 NOTCH1P46531 2555 aa7.19□□□□□ -1.26
RNF40-204ENST00000563683 SYCNQ0VAF6 134 aa7.19□□□□□ -1.26
RNF40-204ENST00000563683 Q8N814 137 aa7.19□□□□□ -1.26
RNF40-204ENST00000563683 SERP1Q9Y6X1 66 aa7.19□□□□□ -1.26
RNF40-204ENST00000563683 IGKV2-24A0A0C4DH68 120 aa7.19□□□□□ -1.26
RNF40-204ENST00000563683 PLAC8L1A1L4L8 177 aa7.19□□□□□ -1.26
RNF40-204ENST00000563683 LYPD5Q6UWN5 251 aa7.19□□□□□ -1.26
RNF40-204ENST00000563683 IL17DQ8TAD2 202 aa7.19□□□□□ -1.26
RNF40-204ENST00000563683 NREPQ16612 68 aa7.19□□□□□ -1.26
RNF40-204ENST00000563683 FAM19A1Q7Z5A9 133 aa7.18□□□□□ -1.26
RNF40-204ENST00000563683 APCP25054 2843 aa7.18□□□□□ -1.26
RNF40-204ENST00000563683 TRAV7A0A075B6U4 112 aa7.17□□□□□ -1.26
RNF40-204ENST00000563683 C10orf25Q5T742 122 aa7.17□□□□□ -1.26
RNF40-204ENST00000563683 MXRA5Q9NR99 2828 aa7.17□□□□□ -1.26
RNF40-204ENST00000563683 ZNF73O43830 326 aaPredicted RBP7.17□□□□□ -1.26
RNF40-204ENST00000563683 FUSP35637 526 aaKnown RBP eCLIP7.16□□□□□ -1.26
RNF40-204ENST00000563683 KRTAP10-3P60369 221 aa7.15□□□□□ -1.26
RNF40-204ENST00000563683 RPL37AP8A6NKH3 93 aa7.15□□□□□ -1.26
RNF40-204ENST00000563683 KRTAP1-1Q07627 177 aa7.14□□□□□ -1.27
RNF40-204ENST00000563683 PDE6GP18545 87 aa7.14□□□□□ -1.27
RNF40-204ENST00000563683 PRO0628Q9UI54 55 aa7.13□□□□□ -1.27
RNF40-204ENST00000563683 M0R378 163 aa7.13□□□□□ -1.27
RNF40-204ENST00000563683 COL6A5A8TX70 2615 aa7.13□□□□□ -1.27
RNF40-204ENST00000563683 C3orf84H3BNL1 204 aa7.13□□□□□ -1.27
RNF40-204ENST00000563683 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.12□□□□□ -1.27
RNF40-204ENST00000563683 H7BZZ5 65 aa7.12□□□□□ -1.27
RNF40-204ENST00000563683 TRAV10A0A0B4J240 114 aa7.12□□□□□ -1.27
RNF40-204ENST00000563683 H3BQ85 93 aa7.12□□□□□ -1.27
RNF40-204ENST00000563683 HIGD2AQ9BW72 106 aa7.12□□□□□ -1.27
RNF40-204ENST00000563683 SMIM26A0A096LP01 95 aa7.12□□□□□ -1.27
RNF40-204ENST00000563683 KLKP1Q107X0 134 aa7.12□□□□□ -1.27
RNF40-204ENST00000563683 NDUFC1O43677 76 aa7.11□□□□□ -1.27
RNF40-204ENST00000563683 Q8NAQ8 132 aa7.11□□□□□ -1.27
RNF40-204ENST00000563683 CUBNO60494 3623 aa7.11□□□□□ -1.27
RNF40-204ENST00000563683 STAB1Q9NY15 2570 aa7.11□□□□□ -1.27
RNF40-204ENST00000563683 EPM2AB3EWF7 344 aa7.11□□□□□ -1.27
RNF40-204ENST00000563683 Q6ZRU5 148 aa7.11□□□□□ -1.27
RNF40-204ENST00000563683 SPATA3Q8NHX4 192 aa7.11□□□□□ -1.27
RNF40-204ENST00000563683 LOC110117498A0A087WWA1 95 aa7.11□□□□□ -1.27
RNF40-204ENST00000563683 EGFEM1PQ0D2K5 195 aa7.11□□□□□ -1.27
RNF40-204ENST00000563683 NBEAL1Q6ZS30 2694 aa7.11□□□□□ -1.27
RNF40-204ENST00000563683 LINC00575Q6W349 94 aa7.1□□□□□ -1.27
RNF40-204ENST00000563683 Q6ZQT0 140 aa7.1□□□□□ -1.27
RNF40-204ENST00000563683 ATP5EP56381 51 aaPredicted RBP7.1□□□□□ -1.27
RNF40-204ENST00000563683 LINC01547P58512 204 aaPredicted RBP7.1□□□□□ -1.27
RNF40-204ENST00000563683 A0A096LNI7 61 aa7.09□□□□□ -1.27
RNF40-204ENST00000563683 BPY2O14599 106 aa7.09□□□□□ -1.27
RNF40-204ENST00000563683 ESRGQ1W209 222 aa7.09□□□□□ -1.27
RNF40-204ENST00000563683 CXCL6P80162 114 aa7.09□□□□□ -1.27
RNF40-204ENST00000563683 C6orf48Q9UBA6 75 aa7.08□□□□□ -1.28
RNF40-204ENST00000563683 MUC7Q8TAX7 377 aa7.08□□□□□ -1.28
RNF40-204ENST00000563683 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.07□□□□□ -1.28
RNF40-204ENST00000563683 Q6ZVQ6 151 aa7.07□□□□□ -1.28
RNF40-204ENST00000563683 SNURFQ9Y675 71 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms