RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 FP248Q71RG6 208 aaPredicted RBP10.67□□□□□ -0.7
NME3-204ENST00000563498 RPL24P83731 157 aaKnown RBP10.66□□□□□ -0.7
NME3-204ENST00000563498 KIAA1644Q3SXP7 199 aa10.66□□□□□ -0.7
NME3-204ENST00000563498 C3orf22Q8N5N4 141 aa10.66□□□□□ -0.7
NME3-204ENST00000563498 SND1-IT1Q9HBX3 110 aa10.66□□□□□ -0.7
NME3-204ENST00000563498 IGLV5-39A0A0G2JS06 123 aa10.65□□□□□ -0.7
NME3-204ENST00000563498 TMEM218A2RU14 115 aa10.65□□□□□ -0.7
NME3-204ENST00000563498 COX17Q14061 63 aa10.65□□□□□ -0.7
NME3-204ENST00000563498 CBLN2Q8IUK8 224 aa10.65□□□□□ -0.7
NME3-204ENST00000563498 ERG28Q9UKR5 140 aa10.64□□□□□ -0.71
NME3-204ENST00000563498 SEC11CQ9BY50 192 aa10.62□□□□□ -0.71
NME3-204ENST00000563498 C5orf52A6NGY3 159 aa10.61□□□□□ -0.71
NME3-204ENST00000563498 IGLC3P0DOY3 106 aa10.61□□□□□ -0.71
NME3-204ENST00000563498 HIGD2AQ9BW72 106 aa10.61□□□□□ -0.71
NME3-204ENST00000563498 TRAV9-1A0A075B6T8 112 aa10.6□□□□□ -0.71
NME3-204ENST00000563498 ASB16-AS1Q495Z4 193 aa10.6□□□□□ -0.71
NME3-204ENST00000563498 LINC00337Q8N6G1 96 aa10.6□□□□□ -0.71
NME3-204ENST00000563498 SPRR4Q96PI1 79 aa10.6□□□□□ -0.71
NME3-204ENST00000563498 KRTAP13-3Q3SY46 172 aa10.59□□□□□ -0.71
NME3-204ENST00000563498 C4orf48Q5BLP8 95 aa10.59□□□□□ -0.71
NME3-204ENST00000563498 Q8NDZ9 215 aa10.59□□□□□ -0.71
NME3-204ENST00000563498 SFTA2Q6UW10 78 aa10.58□□□□□ -0.72
NME3-204ENST00000563498 SMCO4Q9NRQ5 59 aa10.58□□□□□ -0.72
NME3-204ENST00000563498 ZNF706Q9Y5V0 76 aaPredicted RBP10.58□□□□□ -0.72
NME3-204ENST00000563498 ZNF22P17026 224 aaPredicted RBP10.57□□□□□ -0.72
NME3-204ENST00000563498 LINC01547P58512 204 aaPredicted RBP10.57□□□□□ -0.72
NME3-204ENST00000563498 FA2HQ7L5A8 372 aa10.56□□□□□ -0.72
NME3-204ENST00000563498 COLCA2A8K830 154 aa10.55□□□□□ -0.72
NME3-204ENST00000563498 SNRPEP62304 92 aaKnown RBP10.55□□□□□ -0.72
NME3-204ENST00000563498 LCE2DQ5TA82 110 aaPredicted RBP10.55□□□□□ -0.72
NME3-204ENST00000563498 ZNF625Q96I27 306 aaPredicted RBP10.55□□□□□ -0.72
NME3-204ENST00000563498 SPINK1P00995 79 aa10.53□□□□□ -0.72
NME3-204ENST00000563498 Q8NBF4 154 aa10.53□□□□□ -0.72
NME3-204ENST00000563498 NDUFA6P56556 154 aa10.52□□□□□ -0.73
NME3-204ENST00000563498 SEC61BP60468 96 aaKnown RBP10.52□□□□□ -0.73
NME3-204ENST00000563498 COX19Q49B96 90 aa10.51□□□□□ -0.73
NME3-204ENST00000563498 DAND5Q8N907 189 aa10.51□□□□□ -0.73
NME3-204ENST00000563498 A0A096LNJ9 63 aa10.5□□□□□ -0.73
NME3-204ENST00000563498 KRTAP4-1Q9BYQ7 146 aa10.5□□□□□ -0.73
NME3-204ENST00000563498 PRYO14603 147 aa10.49□□□□□ -0.73
NME3-204ENST00000563498 LINC00158P58513 81 aa10.48□□□□□ -0.73
NME3-204ENST00000563498 C11orf86A6NJI1 115 aa10.47□□□□□ -0.73
NME3-204ENST00000563498 SPRR1AP35321 89 aa10.47□□□□□ -0.73
NME3-204ENST00000563498 FABP9Q0Z7S8 132 aa10.47□□□□□ -0.73
NME3-204ENST00000563498 LINC00483Q53H64 154 aa10.46□□□□□ -0.73
NME3-204ENST00000563498 TMEM170BQ5T4T1 132 aa10.46□□□□□ -0.73
NME3-204ENST00000563498 NDUFA12Q9UI09 145 aa10.46□□□□□ -0.73
NME3-204ENST00000563498 HBDP02042 147 aa10.45□□□□□ -0.74
NME3-204ENST00000563498 RPS29P62273 56 aaKnown RBP10.45□□□□□ -0.74
NME3-204ENST00000563498 SMCR5Q8TEV8 140 aa10.45□□□□□ -0.74
NME3-204ENST00000563498 KCNQ1DNQ9H478 68 aa10.45□□□□□ -0.74
NME3-204ENST00000563498 FSIP2Q5CZC0 6907 aa10.44□□□□□ -0.74
NME3-204ENST00000563498 KRTAP4-16G5E9R7 235 aaPredicted RBP10.44□□□□□ -0.74
NME3-204ENST00000563498 BAGE3Q86Y29 109 aa10.44□□□□□ -0.74
NME3-204ENST00000563498 FAM19A2Q8N3H0 131 aa10.44□□□□□ -0.74
NME3-204ENST00000563498 LINC00614P0C842 121 aa10.43□□□□□ -0.74
NME3-204ENST00000563498 URB1-AS1Q96HZ7 61 aa10.43□□□□□ -0.74
NME3-204ENST00000563498 A0A0U1RRA0 63 aa10.42□□□□□ -0.74
NME3-204ENST00000563498 BOD1L2Q8IYS8 172 aa10.42□□□□□ -0.74
NME3-204ENST00000563498 CRCT1Q9UGL9 99 aa10.42□□□□□ -0.74
NME3-204ENST00000563498 ETDCA0A1B0GVM5 59 aa10.41□□□□□ -0.74
NME3-204ENST00000563498 S100A2P29034 98 aa10.41□□□□□ -0.74
NME3-204ENST00000563498 RHEBQ15382 184 aa10.41□□□□□ -0.74
NME3-204ENST00000563498 Q8N377 158 aa10.41□□□□□ -0.74
NME3-204ENST00000563498 C14orf144Q96I85 54 aa10.41□□□□□ -0.74
NME3-204ENST00000563498 CBY1Q9Y3M2 126 aa10.41□□□□□ -0.74
NME3-204ENST00000563498 SSBP3-AS1Q7Z2R9 100 aa10.4□□□□□ -0.74
NME3-204ENST00000563498 C18orf32Q8TCD1 76 aa10.4□□□□□ -0.74
NME3-204ENST00000563498 PMCHL1Q16048 86 aa10.39□□□□□ -0.75
NME3-204ENST00000563498 XP32Q5T750 250 aa10.39□□□□□ -0.75
NME3-204ENST00000563498 A0A1B0GV90 55 aa10.38□□□□□ -0.75
NME3-204ENST00000563498 TMEM223A0PJW6 202 aa10.38□□□□□ -0.75
NME3-204ENST00000563498 TSTD3H0UI37 97 aa10.38□□□□□ -0.75
NME3-204ENST00000563498 NCR3O14931 201 aa10.38□□□□□ -0.75
NME3-204ENST00000563498 SLC25A20O43772 301 aa10.38□□□□□ -0.75
NME3-204ENST00000563498 SMIM13P0DJ93 91 aa10.38□□□□□ -0.75
NME3-204ENST00000563498 GAGE2AQ6NT46 116 aa10.38□□□□□ -0.75
NME3-204ENST00000563498 CHTOPQ9Y3Y2 248 aaKnown RBP10.38□□□□□ -0.75
NME3-204ENST00000563498 TRBV10-3A0A0K0K1G6 114 aa10.37□□□□□ -0.75
NME3-204ENST00000563498 MOBPQ13875 183 aa10.37□□□□□ -0.75
NME3-204ENST00000563498 ANKRD39Q53RE8 183 aa10.37□□□□□ -0.75
NME3-204ENST00000563498 RPS10P5Q9NQ39 176 aa10.37□□□□□ -0.75
NME3-204ENST00000563498 MIR7-3HGQ8N6C7 128 aa10.36□□□□□ -0.75
NME3-204ENST00000563498 IGLV9-49A0A0B4J1Y8 123 aa10.35□□□□□ -0.75
NME3-204ENST00000563498 B5MCH6 92 aa10.35□□□□□ -0.75
NME3-204ENST00000563498 DDTP30046 118 aa10.35□□□□□ -0.75
NME3-204ENST00000563498 HERV-K104P63124 156 aa10.35□□□□□ -0.75
NME3-204ENST00000563498 PYY3Q5JQD4 70 aa10.35□□□□□ -0.75
NME3-204ENST00000563498 MEIG1Q5JSS6 88 aa10.35□□□□□ -0.75
NME3-204ENST00000563498 LCE2CQ5TA81 110 aa10.34□□□□□ -0.75
NME3-204ENST00000563498 TRAV12-1A0A0B4J245 112 aa10.33□□□□□ -0.76
NME3-204ENST00000563498 YPEL4Q96NS1 127 aa10.33□□□□□ -0.76
NME3-204ENST00000563498 TRAPPC1Q9Y5R8 145 aa10.33□□□□□ -0.76
NME3-204ENST00000563498 ERC2-IT1O76042 136 aa10.32□□□□□ -0.76
NME3-204ENST00000563498 MAP1LC3CQ9BXW4 147 aa10.3□□□□□ -0.76
NME3-204ENST00000563498 Q6ZRX8 168 aa10.29□□□□□ -0.76
NME3-204ENST00000563498 Q9BRP9 147 aa10.29□□□□□ -0.76
NME3-204ENST00000563498 LOC107984156A0A0G2JMH3 177 aa10.28□□□□□ -0.76
NME3-204ENST00000563498 TRBV10-2A0A0K0K1G8 114 aa10.28□□□□□ -0.76
NME3-204ENST00000563498 ARL17AQ8IVW1 177 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms