RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 DNAH17Q9UFH2 4485 aa6.59□□□□□ -1.36
SMG1-208ENST00000563448 A0A1W2PPM0 123 aa6.58□□□□□ -1.36
SMG1-208ENST00000563448 TLX1NBP0CAT3 122 aa6.57□□□□□ -1.36
SMG1-208ENST00000563448 NDUFC2-KCTD14E9PQ53 114 aa6.57□□□□□ -1.36
SMG1-208ENST00000563448 Q6ZRP5 223 aa6.57□□□□□ -1.36
SMG1-208ENST00000563448 SND1-IT1Q9HBX3 110 aa6.57□□□□□ -1.36
SMG1-208ENST00000563448 SPCS1Q9Y6A9 102 aa6.57□□□□□ -1.36
SMG1-208ENST00000563448 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.56□□□□□ -1.36
SMG1-208ENST00000563448 LOC107984156A0A0G2JMH3 177 aa6.56□□□□□ -1.36
SMG1-208ENST00000563448 A4D1N5 150 aa6.56□□□□□ -1.36
SMG1-208ENST00000563448 H3BUT2 72 aa6.56□□□□□ -1.36
SMG1-208ENST00000563448 ARL17AQ8IVW1 177 aa6.56□□□□□ -1.36
SMG1-208ENST00000563448 PPDPFQ9H3Y8 114 aa6.56□□□□□ -1.36
SMG1-208ENST00000563448 RYR2Q92736 4967 aa6.56□□□□□ -1.36
SMG1-208ENST00000563448 HECTD4Q9Y4D8 3996 aa6.56□□□□□ -1.36
SMG1-208ENST00000563448 A0A1B0GV72 72 aa6.55□□□□□ -1.36
SMG1-208ENST00000563448 F8W1H4 67 aa6.55□□□□□ -1.36
SMG1-208ENST00000563448 RPL24P83731 157 aaKnown RBP6.55□□□□□ -1.36
SMG1-208ENST00000563448 MTURNQ8N3F0 131 aa6.55□□□□□ -1.36
SMG1-208ENST00000563448 KMT2CQ8NEZ4 4911 aaKnown RBP6.55□□□□□ -1.36
SMG1-208ENST00000563448 FUSP35637 526 aaKnown RBP eCLIP6.55□□□□□ -1.36
SMG1-208ENST00000563448 RPL18AQ02543 176 aaKnown RBP6.55□□□□□ -1.36
SMG1-208ENST00000563448 GAGE2EQ4V326 116 aa6.55□□□□□ -1.36
SMG1-208ENST00000563448 C9orf163Q8N9P6 203 aa6.55□□□□□ -1.36
SMG1-208ENST00000563448 COPS9Q8WXC6 57 aa6.55□□□□□ -1.36
SMG1-208ENST00000563448 SIGMAR1Q99720 223 aa6.55□□□□□ -1.36
SMG1-208ENST00000563448 GAGE2DQ9UEU5 116 aa6.55□□□□□ -1.36
SMG1-208ENST00000563448 LOC107984640A0A0U1RRK4 108 aa6.54□□□□□ -1.36
SMG1-208ENST00000563448 XAGE1AQ9HD64 81 aa6.54□□□□□ -1.36
SMG1-208ENST00000563448 CFC1BP0CG36 223 aa6.54□□□□□ -1.36
SMG1-208ENST00000563448 CFC1P0CG37 223 aa6.54□□□□□ -1.36
SMG1-208ENST00000563448 LINC01620Q4KN68 170 aa6.54□□□□□ -1.36
SMG1-208ENST00000563448 C9orf129Q5T035 196 aaKnown RBP6.54□□□□□ -1.36
SMG1-208ENST00000563448 Q8NDZ9 215 aa6.54□□□□□ -1.36
SMG1-208ENST00000563448 NHP2Q9NX24 153 aaKnown RBP6.54□□□□□ -1.36
SMG1-208ENST00000563448 A6NJY4 79 aa6.53□□□□□ -1.36
SMG1-208ENST00000563448 A0A1B0GWB2 263 aa6.52□□□□□ -1.37
SMG1-208ENST00000563448 K7ERJ3 54 aa6.52□□□□□ -1.37
SMG1-208ENST00000563448 GAGE2BQ13066 116 aa6.52□□□□□ -1.37
SMG1-208ENST00000563448 IGKV2-28A0A075B6P5 120 aa6.52□□□□□ -1.37
SMG1-208ENST00000563448 A0A096LNI7 61 aa6.52□□□□□ -1.37
SMG1-208ENST00000563448 IGKV2D-28P01615 120 aa6.52□□□□□ -1.37
SMG1-208ENST00000563448 RYR3Q15413 4870 aa6.51□□□□□ -1.37
SMG1-208ENST00000563448 PRR3P79522 188 aaKnown RBP6.51□□□□□ -1.37
SMG1-208ENST00000563448 SDIM1Q6ZPB5 146 aa6.51□□□□□ -1.37
SMG1-208ENST00000563448 FAT2Q9NYQ8 4349 aa6.51□□□□□ -1.37
SMG1-208ENST00000563448 DNAH11Q96DT5 4516 aa6.51□□□□□ -1.37
SMG1-208ENST00000563448 A0A0B4J2C4 111 aa6.5□□□□□ -1.37
SMG1-208ENST00000563448 C16orf90A8MZG2 172 aa6.5□□□□□ -1.37
SMG1-208ENST00000563448 NDUFC2O95298 119 aa6.5□□□□□ -1.37
SMG1-208ENST00000563448 KRTAP10-2P60368 255 aa6.5□□□□□ -1.37
SMG1-208ENST00000563448 IGLV5-52A0A0A0MRZ9 124 aa6.5□□□□□ -1.37
SMG1-208ENST00000563448 VPREB1P12018 145 aa6.49□□□□□ -1.37
SMG1-208ENST00000563448 LINC00337Q8N6G1 96 aa6.49□□□□□ -1.37
SMG1-208ENST00000563448 RAB37Q96AX2 223 aa6.49□□□□□ -1.37
SMG1-208ENST00000563448 PKD1P98161 4303 aa6.49□□□□□ -1.37
SMG1-208ENST00000563448 IGKV2-24A0A0C4DH68 120 aa6.49□□□□□ -1.37
SMG1-208ENST00000563448 FAM168BA1KXE4 195 aa6.49□□□□□ -1.37
SMG1-208ENST00000563448 NCR3O14931 201 aa6.49□□□□□ -1.37
SMG1-208ENST00000563448 CHTF8P0CG12 524 aa6.49□□□□□ -1.37
SMG1-208ENST00000563448 SERTAD4-AS1Q5TG53 156 aa6.49□□□□□ -1.37
SMG1-208ENST00000563448 LINC00336Q6ZUF6 198 aa6.49□□□□□ -1.37
SMG1-208ENST00000563448 DNAH5Q8TE73 4624 aa6.48□□□□□ -1.37
SMG1-208ENST00000563448 KRTAP7-1Q8IUC3 87 aa6.48□□□□□ -1.37
SMG1-208ENST00000563448 PRO1854Q9UHT4 67 aa6.48□□□□□ -1.37
SMG1-208ENST00000563448 PLA2G2DQ9UNK4 145 aa6.48□□□□□ -1.37
SMG1-208ENST00000563448 PKIGQ9Y2B9 76 aa6.48□□□□□ -1.37
SMG1-208ENST00000563448 PANO1I0J062 215 aa6.47□□□□□ -1.37
SMG1-208ENST00000563448 RPL13AP40429 203 aaKnown RBP6.46□□□□□ -1.38
SMG1-208ENST00000563448 PGPEP1Q9NXJ5 209 aa6.46□□□□□ -1.38
SMG1-208ENST00000563448 IGLV5-37A0A075B6J1 123 aa6.45□□□□□ -1.38
SMG1-208ENST00000563448 TRAV13-2A0A0B4J235 113 aa6.45□□□□□ -1.38
SMG1-208ENST00000563448 TRBV10-2A0A0K0K1G8 114 aa6.45□□□□□ -1.38
SMG1-208ENST00000563448 A0A1W2PNN7 141 aa6.45□□□□□ -1.38
SMG1-208ENST00000563448 TSPAN13O95857 204 aa6.45□□□□□ -1.38
SMG1-208ENST00000563448 LYRM7Q5U5X0 104 aa6.45□□□□□ -1.38
SMG1-208ENST00000563448 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.45□□□□□ -1.38
SMG1-208ENST00000563448 H7C2G1 150 aa6.45□□□□□ -1.38
SMG1-208ENST00000563448 FAM19A5Q7Z5A7 132 aaPredicted RBP6.45□□□□□ -1.38
SMG1-208ENST00000563448 OR13C6PQ8NH95 151 aa6.45□□□□□ -1.38
SMG1-208ENST00000563448 NAA38Q9BRA0 125 aaKnown RBP6.45□□□□□ -1.38
SMG1-208ENST00000563448 A0A1B0GVY2 172 aa6.44□□□□□ -1.38
SMG1-208ENST00000563448 M0R378 163 aa6.44□□□□□ -1.38
SMG1-208ENST00000563448 SPACA4Q8TDM5 124 aa6.44□□□□□ -1.38
SMG1-208ENST00000563448 NKAPP1Q8N9T2 125 aa6.43□□□□□ -1.38
SMG1-208ENST00000563448 LINC00474Q9P2X8 69 aa6.43□□□□□ -1.38
SMG1-208ENST00000563448 C22orf24Q9Y442 160 aa6.43□□□□□ -1.38
SMG1-208ENST00000563448 IGLV6-57P01721 117 aa6.43□□□□□ -1.38
SMG1-208ENST00000563448 S100A7L2Q5SY68 101 aa6.43□□□□□ -1.38
SMG1-208ENST00000563448 C7orf33Q8WU49 177 aa6.43□□□□□ -1.38
SMG1-208ENST00000563448 TMEM126AQ9H061 195 aa6.43□□□□□ -1.38
SMG1-208ENST00000563448 TRBV10-3A0A0K0K1G6 114 aa6.42□□□□□ -1.38
SMG1-208ENST00000563448 Q1RN00 199 aa6.42□□□□□ -1.38
SMG1-208ENST00000563448 H3BMG7 143 aa6.42□□□□□ -1.38
SMG1-208ENST00000563448 KRTAP10-1P60331 282 aa6.42□□□□□ -1.38
SMG1-208ENST00000563448 DNAH8Q96JB1 4490 aa6.42□□□□□ -1.38
SMG1-208ENST00000563448 EPM2AB3EWF7 344 aa6.41□□□□□ -1.38
SMG1-208ENST00000563448 M0QXV9 152 aa6.41□□□□□ -1.38
SMG1-208ENST00000563448 MRPL55Q7Z7F7 128 aaKnown RBP6.41□□□□□ -1.38
SMG1-208ENST00000563448 SMIM11BQ8TCY0 68 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms