RNA–Protein interactions for RNA: ENST00000563047.1

GGA2-204, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 5

Gene GGA2, Length 366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-204ENST00000563047 HIGD2AQ9BW72 106 aa12.1□□□□□ -0.47
GGA2-204ENST00000563047 C11orf86A6NJI1 115 aa12.08□□□□□ -0.48
GGA2-204ENST00000563047 SEC11CQ9BY50 192 aa12.08□□□□□ -0.48
GGA2-204ENST00000563047 SPRR4Q96PI1 79 aa12.07□□□□□ -0.48
GGA2-204ENST00000563047 PMCHL1Q16048 86 aa12.06□□□□□ -0.48
GGA2-204ENST00000563047 SPAG11AQ6PDA7 123 aa12.06□□□□□ -0.48
GGA2-204ENST00000563047 HBDP02042 147 aa12.05□□□□□ -0.48
GGA2-204ENST00000563047 LINC00614P0C842 121 aa12.05□□□□□ -0.48
GGA2-204ENST00000563047 TMEM170BQ5T4T1 132 aa12.05□□□□□ -0.48
GGA2-204ENST00000563047 SFTA2Q6UW10 78 aa12.05□□□□□ -0.48
GGA2-204ENST00000563047 BAGE3Q86Y29 109 aa12.04□□□□□ -0.48
GGA2-204ENST00000563047 C18orf32Q8TCD1 76 aa12.04□□□□□ -0.48
GGA2-204ENST00000563047 KRTAP9-6A0A140TA67 174 aa12.03□□□□□ -0.48
GGA2-204ENST00000563047 LINC00158P58513 81 aa12.03□□□□□ -0.48
GGA2-204ENST00000563047 FP248Q71RG6 208 aaPredicted RBP12.02□□□□□ -0.49
GGA2-204ENST00000563047 A0A0U1RRA0 63 aa12.01□□□□□ -0.49
GGA2-204ENST00000563047 IFITM2Q01629 132 aa11.99□□□□□ -0.49
GGA2-204ENST00000563047 C4orf48Q5BLP8 95 aa11.99□□□□□ -0.49
GGA2-204ENST00000563047 DAND5Q8N907 189 aa11.99□□□□□ -0.49
GGA2-204ENST00000563047 RPS10P5Q9NQ39 176 aa11.99□□□□□ -0.49
GGA2-204ENST00000563047 ZNF706Q9Y5V0 76 aaPredicted RBP11.99□□□□□ -0.49
GGA2-204ENST00000563047 KRTAP13-3Q3SY46 172 aa11.98□□□□□ -0.49
GGA2-204ENST00000563047 Q8NBF4 154 aa11.98□□□□□ -0.49
GGA2-204ENST00000563047 TRAPPC1Q9Y5R8 145 aa11.98□□□□□ -0.49
GGA2-204ENST00000563047 PRYO14603 147 aa11.97□□□□□ -0.49
GGA2-204ENST00000563047 C10orf91Q5T1B1 145 aa11.97□□□□□ -0.49
GGA2-204ENST00000563047 CHTOPQ9Y3Y2 248 aaKnown RBP11.97□□□□□ -0.49
GGA2-204ENST00000563047 TMEM223A0PJW6 202 aa11.96□□□□□ -0.49
GGA2-204ENST00000563047 SPRR1AP35321 89 aa11.96□□□□□ -0.49
GGA2-204ENST00000563047 RHEBQ15382 184 aa11.96□□□□□ -0.49
GGA2-204ENST00000563047 LINC00337Q8N6G1 96 aa11.96□□□□□ -0.49
GGA2-204ENST00000563047 SMIM13P0DJ93 91 aa11.95□□□□□ -0.5
GGA2-204ENST00000563047 SMCR5Q8TEV8 140 aa11.95□□□□□ -0.5
GGA2-204ENST00000563047 KRTAP4-16G5E9R7 235 aaPredicted RBP11.94□□□□□ -0.5
GGA2-204ENST00000563047 NCR3O14931 201 aa11.94□□□□□ -0.5
GGA2-204ENST00000563047 BOD1L2Q8IYS8 172 aa11.94□□□□□ -0.5
GGA2-204ENST00000563047 KCNQ1DNQ9H478 68 aa11.94□□□□□ -0.5
GGA2-204ENST00000563047 ASB16-AS1Q495Z4 193 aa11.93□□□□□ -0.5
GGA2-204ENST00000563047 COMMD7Q86VX2 200 aa11.93□□□□□ -0.5
GGA2-204ENST00000563047 ATP6V1G1O75348 118 aa11.91□□□□□ -0.5
GGA2-204ENST00000563047 SPINK1P00995 79 aa11.91□□□□□ -0.5
GGA2-204ENST00000563047 MIR7-3HGQ8N6C7 128 aa11.91□□□□□ -0.5
GGA2-204ENST00000563047 KRTAP4-1Q9BYQ7 146 aa11.91□□□□□ -0.5
GGA2-204ENST00000563047 LINC00483Q53H64 154 aa11.9□□□□□ -0.5
GGA2-204ENST00000563047 TRAV12-1A0A0B4J245 112 aa11.89□□□□□ -0.51
GGA2-204ENST00000563047 ETDCA0A1B0GVM5 59 aa11.89□□□□□ -0.51
GGA2-204ENST00000563047 MEIG1Q5JSS6 88 aa11.89□□□□□ -0.51
GGA2-204ENST00000563047 TRBV10-3A0A0K0K1G6 114 aa11.88□□□□□ -0.51
GGA2-204ENST00000563047 IFI27L1Q96BM0 104 aa11.87□□□□□ -0.51
GGA2-204ENST00000563047 HERV-K104P63124 156 aa11.86□□□□□ -0.51
GGA2-204ENST00000563047 GAGE2AQ6NT46 116 aa11.86□□□□□ -0.51
GGA2-204ENST00000563047 B5MCH6 92 aa11.84□□□□□ -0.51
GGA2-204ENST00000563047 ERC2-IT1O76042 136 aa11.84□□□□□ -0.51
GGA2-204ENST00000563047 NDUFA12Q9UI09 145 aa11.84□□□□□ -0.51
GGA2-204ENST00000563047 IGLV9-49A0A0B4J1Y8 123 aa11.83□□□□□ -0.52
GGA2-204ENST00000563047 MOBPQ13875 183 aa11.83□□□□□ -0.52
GGA2-204ENST00000563047 Q8N377 158 aa11.83□□□□□ -0.52
GGA2-204ENST00000563047 LINC01547P58512 204 aaPredicted RBP11.82□□□□□ -0.52
GGA2-204ENST00000563047 SEC61BP60468 96 aaKnown RBP11.82□□□□□ -0.52
GGA2-204ENST00000563047 CHCHD1Q96BP2 118 aaKnown RBP11.82□□□□□ -0.52
GGA2-204ENST00000563047 LINC00587B1AMM8 73 aa11.81□□□□□ -0.52
GGA2-204ENST00000563047 RPS29P62273 56 aaKnown RBP11.81□□□□□ -0.52
GGA2-204ENST00000563047 SSBP3-AS1Q7Z2R9 100 aa11.8□□□□□ -0.52
GGA2-204ENST00000563047 MYMXA0A1B0GTQ4 84 aa11.79□□□□□ -0.52
GGA2-204ENST00000563047 Q9BRP9 147 aa11.79□□□□□ -0.52
GGA2-204ENST00000563047 LOC107984156A0A0G2JMH3 177 aa11.78□□□□□ -0.52
GGA2-204ENST00000563047 S100A12P80511 92 aa11.78□□□□□ -0.52
GGA2-204ENST00000563047 ARL17AQ8IVW1 177 aa11.78□□□□□ -0.52
GGA2-204ENST00000563047 FAM19A2Q8N3H0 131 aa11.78□□□□□ -0.52
GGA2-204ENST00000563047 MAP1LC3CQ9BXW4 147 aa11.78□□□□□ -0.52
GGA2-204ENST00000563047 DDTP30046 118 aa11.77□□□□□ -0.53
GGA2-204ENST00000563047 TSPEAR-AS2P59090 65 aa11.77□□□□□ -0.53
GGA2-204ENST00000563047 APOC3P02656 99 aa11.76□□□□□ -0.53
GGA2-204ENST00000563047 TRBV10-2A0A0K0K1G8 114 aa11.75□□□□□ -0.53
GGA2-204ENST00000563047 SLC25A20O43772 301 aa11.75□□□□□ -0.53
GGA2-204ENST00000563047 LCE2DQ5TA82 110 aaPredicted RBP11.75□□□□□ -0.53
GGA2-204ENST00000563047 Q6ZRX8 168 aa11.75□□□□□ -0.53
GGA2-204ENST00000563047 XP32Q5T750 250 aa11.74□□□□□ -0.53
GGA2-204ENST00000563047 YPEL4Q96NS1 127 aa11.74□□□□□ -0.53
GGA2-204ENST00000563047 H0Y8G0 127 aa11.72□□□□□ -0.53
GGA2-204ENST00000563047 LEPROTO15243 131 aa11.72□□□□□ -0.53
GGA2-204ENST00000563047 SNAPINO95295 136 aa11.72□□□□□ -0.53
GGA2-204ENST00000563047 HSBP1O75506 76 aa11.7□□□□□ -0.54
GGA2-204ENST00000563047 SVBPQ8N300 66 aa11.7□□□□□ -0.54
GGA2-204ENST00000563047 SPANXB1Q9NS25 103 aaPredicted RBP11.7□□□□□ -0.54
GGA2-204ENST00000563047 IGLV6-57P01721 117 aa11.69□□□□□ -0.54
GGA2-204ENST00000563047 J3QQQ9 107 aa11.67□□□□□ -0.54
GGA2-204ENST00000563047 S100A7L2Q5SY68 101 aa11.67□□□□□ -0.54
GGA2-204ENST00000563047 C9orf153Q5TBE3 101 aa11.67□□□□□ -0.54
GGA2-204ENST00000563047 NDUFC2O95298 119 aa11.66□□□□□ -0.54
GGA2-204ENST00000563047 NDUFA5Q16718 116 aa11.66□□□□□ -0.54
GGA2-204ENST00000563047 LCE2CQ5TA81 110 aa11.66□□□□□ -0.54
GGA2-204ENST00000563047 MIEN1Q9BRT3 115 aa11.66□□□□□ -0.54
GGA2-204ENST00000563047 TRAV23DV6A0A075B6W5 121 aa11.65□□□□□ -0.54
GGA2-204ENST00000563047 JOSD1Q15040 202 aaPredicted RBP11.65□□□□□ -0.54
GGA2-204ENST00000563047 LEPROTL1O95214 131 aa11.64□□□□□ -0.55
GGA2-204ENST00000563047 PLNP26678 52 aa11.64□□□□□ -0.55
GGA2-204ENST00000563047 ST20-AS1Q8NBB2 130 aa11.64□□□□□ -0.55
GGA2-204ENST00000563047 EIF4EBP3O60516 100 aaPredicted RBP11.63□□□□□ -0.55
GGA2-204ENST00000563047 NMUP48645 174 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms