RNA–Protein interactions for RNA: ENST00000562542.1

KATNB1-202, Transcript of katanin regulatory subunit B1, humanhuman

TSL 2

Gene KATNB1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNB1-202ENST00000562542 IGLV9-49A0A0B4J1Y8 123 aa10.09□□□□□ -0.79
KATNB1-202ENST00000562542 MOBPQ13875 183 aa10.09□□□□□ -0.79
KATNB1-202ENST00000562542 Q8NDZ9 215 aa10.09□□□□□ -0.79
KATNB1-202ENST00000562542 TOMM6Q96B49 74 aa10.09□□□□□ -0.79
KATNB1-202ENST00000562542 SCGB3A1Q96QR1 104 aa10.09□□□□□ -0.79
KATNB1-202ENST00000562542 NXT2Q9NPJ8 142 aaKnown RBP10.09□□□□□ -0.79
KATNB1-202ENST00000562542 ERG28Q9UKR5 140 aa10.09□□□□□ -0.79
KATNB1-202ENST00000562542 ERASQ7Z444 233 aa10.07□□□□□ -0.8
KATNB1-202ENST00000562542 SMCR5Q8TEV8 140 aa10.07□□□□□ -0.8
KATNB1-202ENST00000562542 H3BRM9 83 aa10.06□□□□□ -0.8
KATNB1-202ENST00000562542 MRPL18Q9H0U6 180 aaKnown RBP10.06□□□□□ -0.8
KATNB1-202ENST00000562542 C9JQL5 133 aa10.05□□□□□ -0.8
KATNB1-202ENST00000562542 GAGE2AQ6NT46 116 aa10.05□□□□□ -0.8
KATNB1-202ENST00000562542 ADCYAP1P18509 176 aa10.04□□□□□ -0.8
KATNB1-202ENST00000562542 COX17Q14061 63 aa10.04□□□□□ -0.8
KATNB1-202ENST00000562542 ZNF625Q96I27 306 aaPredicted RBP10.04□□□□□ -0.8
KATNB1-202ENST00000562542 LINC00483Q53H64 154 aa10.03□□□□□ -0.8
KATNB1-202ENST00000562542 CST9LQ9H4G1 147 aa10.03□□□□□ -0.8
KATNB1-202ENST00000562542 COX6B2Q6YFQ2 88 aa10.02□□□□□ -0.81
KATNB1-202ENST00000562542 SSBP3-AS1Q7Z2R9 100 aa10.02□□□□□ -0.81
KATNB1-202ENST00000562542 PRYO14603 147 aa10.01□□□□□ -0.81
KATNB1-202ENST00000562542 ETDCA0A1B0GVM5 59 aa10□□□□□ -0.81
KATNB1-202ENST00000562542 PEA15Q15121 130 aa9.99□□□□□ -0.81
KATNB1-202ENST00000562542 C9orf92A6NGG3 77 aa9.98□□□□□ -0.81
KATNB1-202ENST00000562542 PMVKQ15126 192 aa9.98□□□□□ -0.81
KATNB1-202ENST00000562542 IGLV5-39A0A0G2JS06 123 aa9.97□□□□□ -0.81
KATNB1-202ENST00000562542 LINC00158P58513 81 aa9.96□□□□□ -0.82
KATNB1-202ENST00000562542 C9orf153Q5TBE3 101 aa9.95□□□□□ -0.82
KATNB1-202ENST00000562542 NCR3O14931 201 aa9.94□□□□□ -0.82
KATNB1-202ENST00000562542 SPRR1AP35321 89 aa9.94□□□□□ -0.82
KATNB1-202ENST00000562542 A0A0U1RRA0 63 aa9.93□□□□□ -0.82
KATNB1-202ENST00000562542 LINC01549A6NIU2 74 aa9.93□□□□□ -0.82
KATNB1-202ENST00000562542 SFTA2Q6UW10 78 aa9.92□□□□□ -0.82
KATNB1-202ENST00000562542 KCNQ1DNQ9H478 68 aa9.92□□□□□ -0.82
KATNB1-202ENST00000562542 KRTAP4-16G5E9R7 235 aaPredicted RBP9.91□□□□□ -0.82
KATNB1-202ENST00000562542 ERC2-IT1O76042 136 aa9.91□□□□□ -0.82
KATNB1-202ENST00000562542 IGLC3P0DOY3 106 aa9.91□□□□□ -0.82
KATNB1-202ENST00000562542 NDUFA6P56556 154 aa9.91□□□□□ -0.82
KATNB1-202ENST00000562542 ZNF22P17026 224 aaPredicted RBP9.9□□□□□ -0.82
KATNB1-202ENST00000562542 S100A12P80511 92 aa9.9□□□□□ -0.82
KATNB1-202ENST00000562542 KIAA1644Q3SXP7 199 aa9.9□□□□□ -0.82
KATNB1-202ENST00000562542 BOD1L2Q8IYS8 172 aa9.9□□□□□ -0.82
KATNB1-202ENST00000562542 ATP6V1G1O75348 118 aa9.88□□□□□ -0.83
KATNB1-202ENST00000562542 FLGP20930 4061 aaPredicted RBP9.87□□□□□ -0.83
KATNB1-202ENST00000562542 B5MCH6 92 aa9.87□□□□□ -0.83
KATNB1-202ENST00000562542 TRBV10-3A0A0K0K1G6 114 aa9.86□□□□□ -0.83
KATNB1-202ENST00000562542 LIMD2Q9BT23 127 aa9.86□□□□□ -0.83
KATNB1-202ENST00000562542 TRAV9-1A0A075B6T8 112 aa9.85□□□□□ -0.83
KATNB1-202ENST00000562542 MT-ND4LP03901 98 aa9.85□□□□□ -0.83
KATNB1-202ENST00000562542 ANAPC16Q96DE5 110 aa9.85□□□□□ -0.83
KATNB1-202ENST00000562542 IGLV6-57P01721 117 aa9.84□□□□□ -0.83
KATNB1-202ENST00000562542 TMEM170BQ5T4T1 132 aa9.83□□□□□ -0.84
KATNB1-202ENST00000562542 Q9BRP9 147 aa9.83□□□□□ -0.84
KATNB1-202ENST00000562542 LINC01546A6NGU7 62 aa9.82□□□□□ -0.84
KATNB1-202ENST00000562542 HRCT1Q6UXD1 115 aa9.82□□□□□ -0.84
KATNB1-202ENST00000562542 FA2HQ7L5A8 372 aa9.82□□□□□ -0.84
KATNB1-202ENST00000562542 SMCO4Q9NRQ5 59 aa9.82□□□□□ -0.84
KATNB1-202ENST00000562542 SSPOA2VEC9 5147 aa9.81□□□□□ -0.84
KATNB1-202ENST00000562542 SMIM13P0DJ93 91 aa9.81□□□□□ -0.84
KATNB1-202ENST00000562542 USH2AO75445 5202 aa9.81□□□□□ -0.84
KATNB1-202ENST00000562542 MEIG1Q5JSS6 88 aa9.79□□□□□ -0.84
KATNB1-202ENST00000562542 Q6ZRX8 168 aa9.79□□□□□ -0.84
KATNB1-202ENST00000562542 MIR7-3HGQ8N6C7 128 aa9.79□□□□□ -0.84
KATNB1-202ENST00000562542 C11orf86A6NJI1 115 aa9.78□□□□□ -0.84
KATNB1-202ENST00000562542 hCG_2014768A0A024R1R8 64 aa9.76□□□□□ -0.85
KATNB1-202ENST00000562542 DDTP30046 118 aa9.76□□□□□ -0.85
KATNB1-202ENST00000562542 CFC1P0CG37 223 aa9.75□□□□□ -0.85
KATNB1-202ENST00000562542 RPL37P61927 97 aaKnown RBP9.75□□□□□ -0.85
KATNB1-202ENST00000562542 Q6Q795 121 aa9.75□□□□□ -0.85
KATNB1-202ENST00000562542 JOSD1Q15040 202 aaPredicted RBP9.73□□□□□ -0.85
KATNB1-202ENST00000562542 BAGE3Q86Y29 109 aa9.73□□□□□ -0.85
KATNB1-202ENST00000562542 ST20-AS1Q8NBB2 130 aa9.73□□□□□ -0.85
KATNB1-202ENST00000562542 FCGBPQ9Y6R7 5405 aaPredicted RBP9.71□□□□□ -0.85
KATNB1-202ENST00000562542 A0A096LNJ9 63 aa9.68□□□□□ -0.86
KATNB1-202ENST00000562542 TMEM223A0PJW6 202 aa9.68□□□□□ -0.86
KATNB1-202ENST00000562542 LINC00587B1AMM8 73 aa9.68□□□□□ -0.86
KATNB1-202ENST00000562542 HERV-K104P63124 156 aa9.68□□□□□ -0.86
KATNB1-202ENST00000562542 S100A7L2Q5SY68 101 aa9.68□□□□□ -0.86
KATNB1-202ENST00000562542 MAP1LC3CQ9BXW4 147 aa9.68□□□□□ -0.86
KATNB1-202ENST00000562542 TRBV10-2A0A0K0K1G8 114 aa9.67□□□□□ -0.86
KATNB1-202ENST00000562542 CHTOPQ9Y3Y2 248 aaKnown RBP9.67□□□□□ -0.86
KATNB1-202ENST00000562542 HBDP02042 147 aa9.66□□□□□ -0.86
KATNB1-202ENST00000562542 PMCHL1Q16048 86 aa9.66□□□□□ -0.86
KATNB1-202ENST00000562542 SLC25A34Q6PIV7 304 aa9.66□□□□□ -0.86
KATNB1-202ENST00000562542 H7C2G1 150 aa9.65□□□□□ -0.86
KATNB1-202ENST00000562542 TRAV23DV6A0A075B6W5 121 aa9.64□□□□□ -0.87
KATNB1-202ENST00000562542 FABP9Q0Z7S8 132 aa9.64□□□□□ -0.87
KATNB1-202ENST00000562542 SPANXB1Q9NS25 103 aaPredicted RBP9.63□□□□□ -0.87
KATNB1-202ENST00000562542 LAMTOR3Q9UHA4 124 aa9.63□□□□□ -0.87
KATNB1-202ENST00000562542 C5orf52A6NGY3 159 aa9.62□□□□□ -0.87
KATNB1-202ENST00000562542 KRTAP19-1Q8IUB9 90 aa9.62□□□□□ -0.87
KATNB1-202ENST00000562542 KRTAP9-8Q9BYQ0 159 aa9.62□□□□□ -0.87
KATNB1-202ENST00000562542 MYMXA0A1B0GTQ4 84 aa9.61□□□□□ -0.87
KATNB1-202ENST00000562542 ZNF73O43830 326 aaPredicted RBP9.61□□□□□ -0.87
KATNB1-202ENST00000562542 MIEN1Q9BRT3 115 aa9.61□□□□□ -0.87
KATNB1-202ENST00000562542 SYNE2Q8WXH0 6885 aaKnown RBP9.6□□□□□ -0.87
KATNB1-202ENST00000562542 LINC00614P0C842 121 aa9.6□□□□□ -0.87
KATNB1-202ENST00000562542 S100PP25815 95 aa9.59□□□□□ -0.87
KATNB1-202ENST00000562542 HINT1P49773 126 aaPredicted RBP9.59□□□□□ -0.87
KATNB1-202ENST00000562542 CD164Q04900 197 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms