RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 PMCHL1Q16048 86 aa9.58□□□□□ -0.88
VPS9D1-AS1-201ENST00000562298 CBLN2Q8IUK8 224 aa9.58□□□□□ -0.88
VPS9D1-AS1-201ENST00000562298 LINC00614P0C842 121 aa9.57□□□□□ -0.88
VPS9D1-AS1-201ENST00000562298 IFITM2Q01629 132 aa9.57□□□□□ -0.88
VPS9D1-AS1-201ENST00000562298 C18orf32Q8TCD1 76 aa9.57□□□□□ -0.88
VPS9D1-AS1-201ENST00000562298 HBDP02042 147 aa9.56□□□□□ -0.88
VPS9D1-AS1-201ENST00000562298 HIGD2AQ9BW72 106 aa9.56□□□□□ -0.88
VPS9D1-AS1-201ENST00000562298 TMEM170BQ5T4T1 132 aa9.55□□□□□ -0.88
VPS9D1-AS1-201ENST00000562298 SFTA2Q6UW10 78 aa9.55□□□□□ -0.88
VPS9D1-AS1-201ENST00000562298 BAGE3Q86Y29 109 aa9.54□□□□□ -0.88
VPS9D1-AS1-201ENST00000562298 SPRR4Q96PI1 79 aa9.54□□□□□ -0.88
VPS9D1-AS1-201ENST00000562298 PPDPFQ9H3Y8 114 aa9.54□□□□□ -0.88
VPS9D1-AS1-201ENST00000562298 RPS10P5Q9NQ39 176 aa9.54□□□□□ -0.88
VPS9D1-AS1-201ENST00000562298 C10orf91Q5T1B1 145 aa9.53□□□□□ -0.88
VPS9D1-AS1-201ENST00000562298 LINC00158P58513 81 aa9.52□□□□□ -0.89
VPS9D1-AS1-201ENST00000562298 RHEBQ15382 184 aa9.52□□□□□ -0.89
VPS9D1-AS1-201ENST00000562298 TRAPPC1Q9Y5R8 145 aa9.52□□□□□ -0.89
VPS9D1-AS1-201ENST00000562298 A0A0U1RRA0 63 aa9.51□□□□□ -0.89
VPS9D1-AS1-201ENST00000562298 SPAG11AQ6PDA7 123 aa9.51□□□□□ -0.89
VPS9D1-AS1-201ENST00000562298 COMMD7Q86VX2 200 aa9.51□□□□□ -0.89
VPS9D1-AS1-201ENST00000562298 CHTOPQ9Y3Y2 248 aaKnown RBP9.5□□□□□ -0.89
VPS9D1-AS1-201ENST00000562298 TMEM223A0PJW6 202 aa9.49□□□□□ -0.89
VPS9D1-AS1-201ENST00000562298 PRYO14603 147 aa9.47□□□□□ -0.89
VPS9D1-AS1-201ENST00000562298 SMIM13P0DJ93 91 aa9.47□□□□□ -0.89
VPS9D1-AS1-201ENST00000562298 DAND5Q8N907 189 aa9.47□□□□□ -0.89
VPS9D1-AS1-201ENST00000562298 ZNF706Q9Y5V0 76 aaPredicted RBP9.47□□□□□ -0.89
VPS9D1-AS1-201ENST00000562298 NCR3O14931 201 aa9.46□□□□□ -0.9
VPS9D1-AS1-201ENST00000562298 SPRR1AP35321 89 aa9.46□□□□□ -0.9
VPS9D1-AS1-201ENST00000562298 FP248Q71RG6 208 aaPredicted RBP9.46□□□□□ -0.9
VPS9D1-AS1-201ENST00000562298 Q8NBF4 154 aa9.46□□□□□ -0.9
VPS9D1-AS1-201ENST00000562298 KRTAP4-16G5E9R7 235 aaPredicted RBP9.45□□□□□ -0.9
VPS9D1-AS1-201ENST00000562298 BOD1L2Q8IYS8 172 aa9.45□□□□□ -0.9
VPS9D1-AS1-201ENST00000562298 LINC00337Q8N6G1 96 aa9.45□□□□□ -0.9
VPS9D1-AS1-201ENST00000562298 TRAV12-1A0A0B4J245 112 aa9.44□□□□□ -0.9
VPS9D1-AS1-201ENST00000562298 KRTAP13-3Q3SY46 172 aa9.44□□□□□ -0.9
VPS9D1-AS1-201ENST00000562298 C4orf48Q5BLP8 95 aa9.44□□□□□ -0.9
VPS9D1-AS1-201ENST00000562298 KCNQ1DNQ9H478 68 aa9.44□□□□□ -0.9
VPS9D1-AS1-201ENST00000562298 MIR7-3HGQ8N6C7 128 aa9.43□□□□□ -0.9
VPS9D1-AS1-201ENST00000562298 SMCR5Q8TEV8 140 aa9.43□□□□□ -0.9
VPS9D1-AS1-201ENST00000562298 MEIG1Q5JSS6 88 aa9.42□□□□□ -0.9
VPS9D1-AS1-201ENST00000562298 IFI27L1Q96BM0 104 aa9.42□□□□□ -0.9
VPS9D1-AS1-201ENST00000562298 ATP6V1G1O75348 118 aa9.41□□□□□ -0.9
VPS9D1-AS1-201ENST00000562298 LINC00483Q53H64 154 aa9.41□□□□□ -0.9
VPS9D1-AS1-201ENST00000562298 TRBV10-3A0A0K0K1G6 114 aa9.4□□□□□ -0.9
VPS9D1-AS1-201ENST00000562298 KRTAP9-6A0A140TA67 174 aa9.4□□□□□ -0.9
VPS9D1-AS1-201ENST00000562298 ETDCA0A1B0GVM5 59 aa9.4□□□□□ -0.9
VPS9D1-AS1-201ENST00000562298 CHCHD1Q96BP2 118 aaKnown RBP9.4□□□□□ -0.9
VPS9D1-AS1-201ENST00000562298 SPINK1P00995 79 aa9.39□□□□□ -0.91
VPS9D1-AS1-201ENST00000562298 HERV-K104P63124 156 aa9.39□□□□□ -0.91
VPS9D1-AS1-201ENST00000562298 ASB16-AS1Q495Z4 193 aa9.39□□□□□ -0.91
VPS9D1-AS1-201ENST00000562298 NDUFA12Q9UI09 145 aa9.38□□□□□ -0.91
VPS9D1-AS1-201ENST00000562298 ERC2-IT1O76042 136 aa9.37□□□□□ -0.91
VPS9D1-AS1-201ENST00000562298 APOC3P02656 99 aa9.37□□□□□ -0.91
VPS9D1-AS1-201ENST00000562298 GAGE2AQ6NT46 116 aa9.37□□□□□ -0.91
VPS9D1-AS1-201ENST00000562298 KRTAP4-1Q9BYQ7 146 aa9.37□□□□□ -0.91
VPS9D1-AS1-201ENST00000562298 B5MCH6 92 aa9.36□□□□□ -0.91
VPS9D1-AS1-201ENST00000562298 TSPEAR-AS2P59090 65 aa9.36□□□□□ -0.91
VPS9D1-AS1-201ENST00000562298 YPEL4Q96NS1 127 aa9.36□□□□□ -0.91
VPS9D1-AS1-201ENST00000562298 LINC00587B1AMM8 73 aa9.35□□□□□ -0.91
VPS9D1-AS1-201ENST00000562298 MOBPQ13875 183 aa9.35□□□□□ -0.91
VPS9D1-AS1-201ENST00000562298 IGLV9-49A0A0B4J1Y8 123 aa9.34□□□□□ -0.91
VPS9D1-AS1-201ENST00000562298 MYMXA0A1B0GTQ4 84 aa9.34□□□□□ -0.91
VPS9D1-AS1-201ENST00000562298 SNAPINO95295 136 aa9.34□□□□□ -0.91
VPS9D1-AS1-201ENST00000562298 Q8N377 158 aa9.34□□□□□ -0.91
VPS9D1-AS1-201ENST00000562298 FAM19A2Q8N3H0 131 aa9.34□□□□□ -0.91
VPS9D1-AS1-201ENST00000562298 Q9BRP9 147 aa9.34□□□□□ -0.91
VPS9D1-AS1-201ENST00000562298 LOC107984156A0A0G2JMH3 177 aa9.33□□□□□ -0.92
VPS9D1-AS1-201ENST00000562298 ARL17AQ8IVW1 177 aa9.33□□□□□ -0.92
VPS9D1-AS1-201ENST00000562298 SVBPQ8N300 66 aa9.33□□□□□ -0.92
VPS9D1-AS1-201ENST00000562298 MAP1LC3CQ9BXW4 147 aa9.33□□□□□ -0.92
VPS9D1-AS1-201ENST00000562298 H0Y8G0 127 aa9.32□□□□□ -0.92
VPS9D1-AS1-201ENST00000562298 DDTP30046 118 aa9.32□□□□□ -0.92
VPS9D1-AS1-201ENST00000562298 RPS29P62273 56 aaKnown RBP9.32□□□□□ -0.92
VPS9D1-AS1-201ENST00000562298 HSBP1O75506 76 aa9.31□□□□□ -0.92
VPS9D1-AS1-201ENST00000562298 S100A12P80511 92 aa9.31□□□□□ -0.92
VPS9D1-AS1-201ENST00000562298 SSBP3-AS1Q7Z2R9 100 aa9.31□□□□□ -0.92
VPS9D1-AS1-201ENST00000562298 TRBV10-2A0A0K0K1G8 114 aa9.3□□□□□ -0.92
VPS9D1-AS1-201ENST00000562298 SEC61BP60468 96 aaKnown RBP9.3□□□□□ -0.92
VPS9D1-AS1-201ENST00000562298 Q6ZRX8 168 aa9.3□□□□□ -0.92
VPS9D1-AS1-201ENST00000562298 LEPROTO15243 131 aa9.29□□□□□ -0.92
VPS9D1-AS1-201ENST00000562298 NDUFA5Q16718 116 aa9.29□□□□□ -0.92
VPS9D1-AS1-201ENST00000562298 LINC01547P58512 204 aaPredicted RBP9.28□□□□□ -0.92
VPS9D1-AS1-201ENST00000562298 SPANXB1Q9NS25 103 aaPredicted RBP9.28□□□□□ -0.92
VPS9D1-AS1-201ENST00000562298 J3QQQ9 107 aa9.26□□□□□ -0.93
VPS9D1-AS1-201ENST00000562298 SLC25A20O43772 301 aa9.26□□□□□ -0.93
VPS9D1-AS1-201ENST00000562298 IGLV6-57P01721 117 aa9.26□□□□□ -0.93
VPS9D1-AS1-201ENST00000562298 LINC00310P59036 64 aa9.26□□□□□ -0.93
VPS9D1-AS1-201ENST00000562298 LEPROTL1O95214 131 aa9.25□□□□□ -0.93
VPS9D1-AS1-201ENST00000562298 PLNP26678 52 aa9.25□□□□□ -0.93
VPS9D1-AS1-201ENST00000562298 XP32Q5T750 250 aa9.25□□□□□ -0.93
VPS9D1-AS1-201ENST00000562298 NDUFC2O95298 119 aa9.24□□□□□ -0.93
VPS9D1-AS1-201ENST00000562298 S100A7L2Q5SY68 101 aa9.24□□□□□ -0.93
VPS9D1-AS1-201ENST00000562298 MIEN1Q9BRT3 115 aa9.24□□□□□ -0.93
VPS9D1-AS1-201ENST00000562298 TRAV23DV6A0A075B6W5 121 aa9.23□□□□□ -0.93
VPS9D1-AS1-201ENST00000562298 EIF4EBP3O60516 100 aaPredicted RBP9.23□□□□□ -0.93
VPS9D1-AS1-201ENST00000562298 C9orf153Q5TBE3 101 aa9.23□□□□□ -0.93
VPS9D1-AS1-201ENST00000562298 SOSTDC1Q6X4U4 206 aa9.23□□□□□ -0.93
VPS9D1-AS1-201ENST00000562298 PMCHL2Q9BQD1 86 aa9.23□□□□□ -0.93
VPS9D1-AS1-201ENST00000562298 SERF1AO75920 110 aa9.22□□□□□ -0.93
VPS9D1-AS1-201ENST00000562298 TRGC2P03986 189 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms