RNA–Protein interactions for RNA: ENST00000561638.1

TMEM249-201, Transcript of transmembrane protein 249, humanhuman

TSL 2

Gene TMEM249, Length 1,762 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM249-201ENST00000561638 Q6ZRU5 148 aa15.18■□□□□ 0.02
TMEM249-201ENST00000561638 UNQ6190/PRO20217Q6UXQ8 127 aa15.17■□□□□ 0.02
TMEM249-201ENST00000561638 TSPEAR-AS2P59090 65 aa15.16■□□□□ 0.02
TMEM249-201ENST00000561638 KRTAP10-2P60368 255 aa15.16■□□□□ 0.02
TMEM249-201ENST00000561638 IGKV2D-26A0A0A0MRZ7 120 aa15.15■□□□□ 0.02
TMEM249-201ENST00000561638 MYMXA0A1B0GTQ4 84 aa15.15■□□□□ 0.02
TMEM249-201ENST00000561638 C10orf25Q5T742 122 aa15.15■□□□□ 0.02
TMEM249-201ENST00000561638 SFTA2Q6UW10 78 aa15.15■□□□□ 0.02
TMEM249-201ENST00000561638 NDUFA12Q9UI09 145 aa15.15■□□□□ 0.02
TMEM249-201ENST00000561638 SNCGO76070 127 aa15.13■□□□□ 0.01
TMEM249-201ENST00000561638 MT-ATP8P03928 68 aa15.13■□□□□ 0.01
TMEM249-201ENST00000561638 ZNF625Q96I27 306 aaPredicted RBP15.12■□□□□ 0.01
TMEM249-201ENST00000561638 C6orf48Q9UBA6 75 aa15.12■□□□□ 0.01
TMEM249-201ENST00000561638 SS18L2Q9UHA2 77 aa15.12■□□□□ 0.01
TMEM249-201ENST00000561638 TRBV30A0A0K0K1B3 111 aa15.11■□□□□ 0.01
TMEM249-201ENST00000561638 A0A1B0GVY2 172 aa15.11■□□□□ 0.01
TMEM249-201ENST00000561638 XGP55808 180 aa15.11■□□□□ 0.01
TMEM249-201ENST00000561638 GAGE2BQ13066 116 aa15.11■□□□□ 0.01
TMEM249-201ENST00000561638 LINC01620Q4KN68 170 aa15.11■□□□□ 0.01
TMEM249-201ENST00000561638 GAGE2EQ4V326 116 aa15.11■□□□□ 0.01
TMEM249-201ENST00000561638 GAGE2DQ9UEU5 116 aa15.11■□□□□ 0.01
TMEM249-201ENST00000561638 C9orf163Q8N9P6 203 aa15.1■□□□□ 0.01
TMEM249-201ENST00000561638 SCGB1C2P0DMR2 95 aa15.08■□□□□ 0.01
TMEM249-201ENST00000561638 C9orf116Q5BN46 136 aaPredicted RBP15.08■□□□□ 0.01
TMEM249-201ENST00000561638 SPANXCQ9NY87 97 aa15.08■□□□□ 0.01
TMEM249-201ENST00000561638 ZNF815PA8K554 130 aa15.08■□□□□ 0
TMEM249-201ENST00000561638 PSMB2P49721 201 aa15.08■□□□□ 0
TMEM249-201ENST00000561638 HERV-K104P63124 156 aa15.08■□□□□ 0
TMEM249-201ENST00000561638 TTTY13Q9BZ97 58 aa15.08■□□□□ 0
TMEM249-201ENST00000561638 IFITM1P13164 125 aa15.06■□□□□ 0
TMEM249-201ENST00000561638 TMEM126AQ9H061 195 aa15.06■□□□□ 0
TMEM249-201ENST00000561638 MEIG1Q5JSS6 88 aa15.06■□□□□ 0
TMEM249-201ENST00000561638 PFN2P35080 140 aa15.05■□□□□ -0
TMEM249-201ENST00000561638 LOC107984156A0A0G2JMH3 177 aa15.04■□□□□ -0
TMEM249-201ENST00000561638 B5MCH6 92 aa15.04■□□□□ -0
TMEM249-201ENST00000561638 RPL18AQ02543 176 aaKnown RBP15.04■□□□□ -0
TMEM249-201ENST00000561638 ARL17AQ8IVW1 177 aa15.04■□□□□ -0
TMEM249-201ENST00000561638 PKIGQ9Y2B9 76 aa15.04■□□□□ -0
TMEM249-201ENST00000561638 PKD1P98161 4303 aa15.04■□□□□ -0
TMEM249-201ENST00000561638 C16orf90A8MZG2 172 aa15.03■□□□□ -0
TMEM249-201ENST00000561638 LOC107984640A0A0U1RRK4 108 aa15.03■□□□□ -0
TMEM249-201ENST00000561638 NDUFV3P56181 108 aaKnown RBP15.03■□□□□ -0
TMEM249-201ENST00000561638 SRSF9Q13242 221 aaKnown RBP eCLIP15.02□□□□□ -0.01
TMEM249-201ENST00000561638 SCGB1D4Q6XE38 83 aa15.02□□□□□ -0.01
TMEM249-201ENST00000561638 A0A0U1RRA0 63 aa15.01□□□□□ -0.01
TMEM249-201ENST00000561638 NDUFC2-KCTD14E9PQ53 114 aa15.01□□□□□ -0.01
TMEM249-201ENST00000561638 DNAH11Q96DT5 4516 aa15.01□□□□□ -0.01
TMEM249-201ENST00000561638 SMCPP49901 116 aaPredicted RBP15.01□□□□□ -0.01
TMEM249-201ENST00000561638 LINC00158P58513 81 aa15.01□□□□□ -0.01
TMEM249-201ENST00000561638 COX17Q14061 63 aa15□□□□□ -0.01
TMEM249-201ENST00000561638 A0A0J9YXY3 114 aa14.99□□□□□ -0.01
TMEM249-201ENST00000561638 CIRBPQ14011 172 aaKnown RBP14.99□□□□□ -0.01
TMEM249-201ENST00000561638 SDIM1Q6ZPB5 146 aa14.99□□□□□ -0.01
TMEM249-201ENST00000561638 HECTD4Q9Y4D8 3996 aa14.99□□□□□ -0.01
TMEM249-201ENST00000561638 IGKV2-24A0A0C4DH68 120 aa14.98□□□□□ -0.01
TMEM249-201ENST00000561638 TLX1NBP0CAT3 122 aa14.98□□□□□ -0.01
TMEM249-201ENST00000561638 Q6ZRP5 223 aa14.98□□□□□ -0.01
TMEM249-201ENST00000561638 LINC01600Q96MT4 127 aa14.98□□□□□ -0.01
TMEM249-201ENST00000561638 A0A096LNI7 61 aa14.96□□□□□ -0.02
TMEM249-201ENST00000561638 PKHD1P08F94 4074 aa14.95□□□□□ -0.02
TMEM249-201ENST00000561638 KRTAP10-1P60331 282 aa14.95□□□□□ -0.02
TMEM249-201ENST00000561638 ANKRD29Q8N6D5 301 aa14.95□□□□□ -0.02
TMEM249-201ENST00000561638 SLC25A20O43772 301 aa14.93□□□□□ -0.02
TMEM249-201ENST00000561638 CHTF8P0CG12 524 aa14.93□□□□□ -0.02
TMEM249-201ENST00000561638 DPH3Q96FX2 82 aa14.93□□□□□ -0.02
TMEM249-201ENST00000561638 XAGE1AQ9HD64 81 aa14.93□□□□□ -0.02
TMEM249-201ENST00000561638 LINC00474Q9P2X8 69 aa14.93□□□□□ -0.02
TMEM249-201ENST00000561638 MIR7-3HGQ8N6C7 128 aa14.92□□□□□ -0.02
TMEM249-201ENST00000561638 DAND5Q8N907 189 aa14.92□□□□□ -0.02
TMEM249-201ENST00000561638 RPL13AP40429 203 aaKnown RBP14.91□□□□□ -0.02
TMEM249-201ENST00000561638 SMIM20Q8N5G0 67 aa14.91□□□□□ -0.02
TMEM249-201ENST00000561638 PRO1854Q9UHT4 67 aa14.91□□□□□ -0.02
TMEM249-201ENST00000561638 TCL1BO95988 128 aa14.9□□□□□ -0.02
TMEM249-201ENST00000561638 ATXN8Q156A1 80 aa14.9□□□□□ -0.02
TMEM249-201ENST00000561638 SND1-IT1Q9HBX3 110 aa14.9□□□□□ -0.02
TMEM249-201ENST00000561638 TIMM17BO60830 172 aa14.89□□□□□ -0.03
TMEM249-201ENST00000561638 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.89□□□□□ -0.03
TMEM249-201ENST00000561638 DNAH5Q8TE73 4624 aa14.89□□□□□ -0.03
TMEM249-201ENST00000561638 FAM240AA0A1B0GVK7 77 aa14.88□□□□□ -0.03
TMEM249-201ENST00000561638 ADAMTSL4-AS1Q5T5F5 129 aa14.88□□□□□ -0.03
TMEM249-201ENST00000561638 PANO1I0J062 215 aa14.86□□□□□ -0.03
TMEM249-201ENST00000561638 SPACA4Q8TDM5 124 aa14.86□□□□□ -0.03
TMEM249-201ENST00000561638 LITAFQ99732 161 aa14.86□□□□□ -0.03
TMEM249-201ENST00000561638 A0A0B4J2C4 111 aa14.85□□□□□ -0.03
TMEM249-201ENST00000561638 NPC2P61916 151 aa14.85□□□□□ -0.03
TMEM249-201ENST00000561638 C9orf129Q5T035 196 aaKnown RBP14.85□□□□□ -0.03
TMEM249-201ENST00000561638 FAM30AQ9NZY2 134 aa14.85□□□□□ -0.03
TMEM249-201ENST00000561638 IMUPQ9GZP8 106 aa14.84□□□□□ -0.03
TMEM249-201ENST00000561638 C9JAW5 83 aa14.82□□□□□ -0.04
TMEM249-201ENST00000561638 Q6ZSA8 131 aa14.82□□□□□ -0.04
TMEM249-201ENST00000561638 ACYP1P07311 99 aa14.81□□□□□ -0.04
TMEM249-201ENST00000561638 TRBV10-2A0A0K0K1G8 114 aa14.8□□□□□ -0.04
TMEM249-201ENST00000561638 FAM168BA1KXE4 195 aa14.8□□□□□ -0.04
TMEM249-201ENST00000561638 H3BT86 120 aa14.8□□□□□ -0.04
TMEM249-201ENST00000561638 CCDC179H3BU77 68 aa14.8□□□□□ -0.04
TMEM249-201ENST00000561638 A0A087WYN8 130 aa14.8□□□□□ -0.04
TMEM249-201ENST00000561638 FAM19A5Q7Z5A7 132 aaPredicted RBP14.8□□□□□ -0.04
TMEM249-201ENST00000561638 COX6CP09669 75 aa14.78□□□□□ -0.04
TMEM249-201ENST00000561638 CFC1BP0CG36 223 aa14.78□□□□□ -0.04
TMEM249-201ENST00000561638 CFC1P0CG37 223 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 190.8 ms