RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 PLA2G2DQ9UNK4 145 aa6.75□□□□□ -1.33
TPM1-229ENST00000561242 A0A0J9YXY3 114 aa6.74□□□□□ -1.33
TPM1-229ENST00000561242 M0R378 163 aa6.74□□□□□ -1.33
TPM1-229ENST00000561242 TIMM17BO60830 172 aa6.74□□□□□ -1.33
TPM1-229ENST00000561242 UBE2AP49459 152 aa6.74□□□□□ -1.33
TPM1-229ENST00000561242 JOSD1Q15040 202 aaPredicted RBP6.74□□□□□ -1.33
TPM1-229ENST00000561242 VAMP8Q9BV40 100 aa6.74□□□□□ -1.33
TPM1-229ENST00000561242 REG3GQ6UW15 175 aa6.73□□□□□ -1.33
TPM1-229ENST00000561242 Q6ZVH6 145 aa6.73□□□□□ -1.33
TPM1-229ENST00000561242 OR13C6PQ8NH95 151 aa6.73□□□□□ -1.33
TPM1-229ENST00000561242 IGKV2D-26A0A0A0MRZ7 120 aa6.72□□□□□ -1.33
TPM1-229ENST00000561242 RPL37AP8A6NKH3 93 aa6.72□□□□□ -1.33
TPM1-229ENST00000561242 TSPEAR-AS2P59090 65 aa6.72□□□□□ -1.33
TPM1-229ENST00000561242 NPC2P61916 151 aa6.72□□□□□ -1.33
TPM1-229ENST00000561242 SERTAD4-AS1Q5TG53 156 aa6.72□□□□□ -1.33
TPM1-229ENST00000561242 LINC00518Q8N0U6 118 aa6.72□□□□□ -1.33
TPM1-229ENST00000561242 IFITM1P13164 125 aa6.71□□□□□ -1.34
TPM1-229ENST00000561242 RPL28P46779 137 aaKnown RBP6.71□□□□□ -1.34
TPM1-229ENST00000561242 HNRNPA3P51991 378 aaKnown RBP6.71□□□□□ -1.34
TPM1-229ENST00000561242 DAND5Q8N907 189 aa6.71□□□□□ -1.34
TPM1-229ENST00000561242 DIRC1Q969H9 104 aa6.71□□□□□ -1.34
TPM1-229ENST00000561242 LINC00167Q96N53 147 aa6.71□□□□□ -1.34
TPM1-229ENST00000561242 IGKV2-28A0A075B6P5 120 aa6.7□□□□□ -1.34
TPM1-229ENST00000561242 J3QL48 77 aa6.7□□□□□ -1.34
TPM1-229ENST00000561242 NCR3O14931 201 aa6.7□□□□□ -1.34
TPM1-229ENST00000561242 IGKV2D-28P01615 120 aa6.7□□□□□ -1.34
TPM1-229ENST00000561242 PRR3P79522 188 aaKnown RBP6.7□□□□□ -1.34
TPM1-229ENST00000561242 ANKRD39Q53RE8 183 aa6.7□□□□□ -1.34
TPM1-229ENST00000561242 SPINK6Q6UWN8 80 aa6.7□□□□□ -1.34
TPM1-229ENST00000561242 SPANXB1Q9NS25 103 aaPredicted RBP6.7□□□□□ -1.34
TPM1-229ENST00000561242 PSORS1C2Q9UIG4 136 aa6.7□□□□□ -1.34
TPM1-229ENST00000561242 IGLV5-37A0A075B6J1 123 aa6.69□□□□□ -1.34
TPM1-229ENST00000561242 ETDCA0A1B0GVM5 59 aa6.69□□□□□ -1.34
TPM1-229ENST00000561242 SPATA45Q537H7 98 aa6.69□□□□□ -1.34
TPM1-229ENST00000561242 HIST1H4GQ99525 98 aa6.69□□□□□ -1.34
TPM1-229ENST00000561242 PAM16Q9Y3D7 125 aa6.69□□□□□ -1.34
TPM1-229ENST00000561242 NDUFC2O95298 119 aa6.68□□□□□ -1.34
TPM1-229ENST00000561242 FAM19A1Q7Z5A9 133 aa6.68□□□□□ -1.34
TPM1-229ENST00000561242 SPANXCQ9NY87 97 aa6.68□□□□□ -1.34
TPM1-229ENST00000561242 TRBV10-2A0A0K0K1G8 114 aa6.67□□□□□ -1.34
TPM1-229ENST00000561242 BCE1O60756 84 aa6.67□□□□□ -1.34
TPM1-229ENST00000561242 IGLV7-43P04211 117 aa6.67□□□□□ -1.34
TPM1-229ENST00000561242 VPREB1P12018 145 aa6.67□□□□□ -1.34
TPM1-229ENST00000561242 DDTP30046 118 aa6.67□□□□□ -1.34
TPM1-229ENST00000561242 LINC00308Q8TCZ7 52 aa6.67□□□□□ -1.34
TPM1-229ENST00000561242 A6NDN8 102 aa6.66□□□□□ -1.34
TPM1-229ENST00000561242 SLC25A34Q6PIV7 304 aa6.66□□□□□ -1.34
TPM1-229ENST00000561242 PCP2Q8IVA1 136 aa6.66□□□□□ -1.34
TPM1-229ENST00000561242 SPANXDQ9BXN6 97 aa6.66□□□□□ -1.34
TPM1-229ENST00000561242 TTTY13Q9BZ97 58 aa6.66□□□□□ -1.34
TPM1-229ENST00000561242 TMEM126AQ9H061 195 aa6.66□□□□□ -1.34
TPM1-229ENST00000561242 FRAS1Q86XX4 4008 aa6.66□□□□□ -1.34
TPM1-229ENST00000561242 DNAH10Q8IVF4 4471 aa6.65□□□□□ -1.34
TPM1-229ENST00000561242 PRYO14603 147 aa6.65□□□□□ -1.34
TPM1-229ENST00000561242 COX8AP10176 69 aa6.65□□□□□ -1.34
TPM1-229ENST00000561242 IGLV1-50A0A075B6I6 118 aa6.64□□□□□ -1.35
TPM1-229ENST00000561242 TRAV13-2A0A0B4J235 113 aa6.64□□□□□ -1.35
TPM1-229ENST00000561242 LOC107984156A0A0G2JMH3 177 aa6.64□□□□□ -1.35
TPM1-229ENST00000561242 ZNF861PO60384 105 aa6.64□□□□□ -1.35
TPM1-229ENST00000561242 SNCGO76070 127 aa6.64□□□□□ -1.35
TPM1-229ENST00000561242 ADAMTSL4-AS1Q5T5F5 129 aa6.64□□□□□ -1.35
TPM1-229ENST00000561242 ARL17AQ8IVW1 177 aa6.64□□□□□ -1.35
TPM1-229ENST00000561242 C14orf144Q96I85 54 aa6.64□□□□□ -1.35
TPM1-229ENST00000561242 TMEM238LA0A1B0GVL6 79 aa6.63□□□□□ -1.35
TPM1-229ENST00000561242 A6NJY4 79 aa6.63□□□□□ -1.35
TPM1-229ENST00000561242 OXTP01178 125 aa6.63□□□□□ -1.35
TPM1-229ENST00000561242 VAMP3Q15836 100 aa6.63□□□□□ -1.35
TPM1-229ENST00000561242 MUSTN1Q8IVN3 82 aa6.63□□□□□ -1.35
TPM1-229ENST00000561242 DNAH17Q9UFH2 4485 aa6.62□□□□□ -1.35
TPM1-229ENST00000561242 TRAV23DV6A0A075B6W5 121 aa6.62□□□□□ -1.35
TPM1-229ENST00000561242 DLEU1O43261 78 aa6.62□□□□□ -1.35
TPM1-229ENST00000561242 ZNF706Q9Y5V0 76 aaPredicted RBP6.62□□□□□ -1.35
TPM1-229ENST00000561242 TRBV10-3A0A0K0K1G6 114 aa6.61□□□□□ -1.35
TPM1-229ENST00000561242 RAB37Q96AX2 223 aa6.61□□□□□ -1.35
TPM1-229ENST00000561242 HECTD4Q9Y4D8 3996 aa6.6□□□□□ -1.35
TPM1-229ENST00000561242 DNAH2Q9P225 4427 aa6.6□□□□□ -1.35
TPM1-229ENST00000561242 HIGD2AQ9BW72 106 aa6.6□□□□□ -1.35
TPM1-229ENST00000561242 H0Y9J4 135 aa6.59□□□□□ -1.35
TPM1-229ENST00000561242 SLC25A20O43772 301 aa6.59□□□□□ -1.35
TPM1-229ENST00000561242 PPDPFQ9H3Y8 114 aa6.59□□□□□ -1.35
TPM1-229ENST00000561242 KCNQ1DNQ9H478 68 aa6.59□□□□□ -1.35
TPM1-229ENST00000561242 FAT2Q9NYQ8 4349 aa6.58□□□□□ -1.36
TPM1-229ENST00000561242 ZNF73O43830 326 aaPredicted RBP6.58□□□□□ -1.36
TPM1-229ENST00000561242 KRTAP7-1Q8IUC3 87 aa6.58□□□□□ -1.36
TPM1-229ENST00000561242 LINC00337Q8N6G1 96 aa6.58□□□□□ -1.36
TPM1-229ENST00000561242 LITAFQ99732 161 aa6.58□□□□□ -1.36
TPM1-229ENST00000561242 UQCR10Q9UDW1 63 aa6.58□□□□□ -1.36
TPM1-229ENST00000561242 RPL13AP40429 203 aaKnown RBP6.57□□□□□ -1.36
TPM1-229ENST00000561242 PRLHP81277 87 aa6.57□□□□□ -1.36
TPM1-229ENST00000561242 TAL2Q16559 108 aa6.57□□□□□ -1.36
TPM1-229ENST00000561242 Q1RN00 199 aa6.57□□□□□ -1.36
TPM1-229ENST00000561242 PYY3Q5JQD4 70 aa6.57□□□□□ -1.36
TPM1-229ENST00000561242 KRTAP4-5Q9BYR2 181 aa6.57□□□□□ -1.36
TPM1-229ENST00000561242 NHP2Q9NX24 153 aaKnown RBP6.57□□□□□ -1.36
TPM1-229ENST00000561242 IGLV6-57P01721 117 aa6.56□□□□□ -1.36
TPM1-229ENST00000561242 COX7BP24311 80 aa6.56□□□□□ -1.36
TPM1-229ENST00000561242 SOSTDC1Q6X4U4 206 aa6.56□□□□□ -1.36
TPM1-229ENST00000561242 HIGD1BQ9P298 99 aa6.56□□□□□ -1.36
TPM1-229ENST00000561242 A4D1N5 150 aa6.55□□□□□ -1.36
TPM1-229ENST00000561242 DHRS4-AS1Q9P1J3 65 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms