RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 ZNF861PO60384 105 aa9.64□□□□□ -0.87
LMX1B-204ENST00000561065 NDUFA12Q9UI09 145 aa9.64□□□□□ -0.87
LMX1B-204ENST00000561065 HIST1H2BKO60814 126 aa9.63□□□□□ -0.87
LMX1B-204ENST00000561065 IGKCP01834 107 aa9.63□□□□□ -0.87
LMX1B-204ENST00000561065 HIST1H2BJP06899 126 aa9.63□□□□□ -0.87
LMX1B-204ENST00000561065 KRTAP1-4P0C5Y4 121 aa9.63□□□□□ -0.87
LMX1B-204ENST00000561065 HIST1H2BOP23527 126 aa9.63□□□□□ -0.87
LMX1B-204ENST00000561065 HIST1H2BBP33778 126 aa9.63□□□□□ -0.87
LMX1B-204ENST00000561065 HIST1H2BDP58876 126 aa9.63□□□□□ -0.87
LMX1B-204ENST00000561065 HIST1H2BCP62807 126 aa9.63□□□□□ -0.87
LMX1B-204ENST00000561065 HIST2H2BEQ16778 126 aa9.63□□□□□ -0.87
LMX1B-204ENST00000561065 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.63□□□□□ -0.87
LMX1B-204ENST00000561065 PRR26Q8N8Z3 221 aa9.63□□□□□ -0.87
LMX1B-204ENST00000561065 HIST1H2BHQ93079 126 aa9.63□□□□□ -0.87
LMX1B-204ENST00000561065 HIST1H2BNQ99877 126 aa9.63□□□□□ -0.87
LMX1B-204ENST00000561065 HIST1H2BMQ99879 126 aa9.63□□□□□ -0.87
LMX1B-204ENST00000561065 RNF213Q63HN8 5207 aa9.63□□□□□ -0.87
LMX1B-204ENST00000561065 RPL37AP8A6NKH3 93 aa9.62□□□□□ -0.87
LMX1B-204ENST00000561065 LEPROTO15243 131 aa9.62□□□□□ -0.87
LMX1B-204ENST00000561065 BCE1O60756 84 aa9.62□□□□□ -0.87
LMX1B-204ENST00000561065 NMUP48645 174 aa9.62□□□□□ -0.87
LMX1B-204ENST00000561065 LINC00310P59036 64 aa9.62□□□□□ -0.87
LMX1B-204ENST00000561065 GAGE10A6NGK3 116 aa9.61□□□□□ -0.87
LMX1B-204ENST00000561065 SCO1O75880 301 aa9.61□□□□□ -0.87
LMX1B-204ENST00000561065 LGALS3P17931 250 aaKnown RBP9.6□□□□□ -0.87
LMX1B-204ENST00000561065 IGLV1-50A0A075B6I6 118 aa9.59□□□□□ -0.87
LMX1B-204ENST00000561065 UBE2AP49459 152 aa9.59□□□□□ -0.87
LMX1B-204ENST00000561065 S100A12P80511 92 aa9.59□□□□□ -0.87
LMX1B-204ENST00000561065 A0A0U1RRA0 63 aa9.58□□□□□ -0.88
LMX1B-204ENST00000561065 J3QQQ9 107 aa9.58□□□□□ -0.88
LMX1B-204ENST00000561065 VPREB1P12018 145 aa9.58□□□□□ -0.88
LMX1B-204ENST00000561065 S100A1P23297 94 aa9.58□□□□□ -0.88
LMX1B-204ENST00000561065 RPL13AP40429 203 aaKnown RBP9.58□□□□□ -0.88
LMX1B-204ENST00000561065 SYS1-DBNDD2H3BUS1 97 aa9.57□□□□□ -0.88
LMX1B-204ENST00000561065 M0R378 163 aa9.57□□□□□ -0.88
LMX1B-204ENST00000561065 SMIM13P0DJ93 91 aa9.57□□□□□ -0.88
LMX1B-204ENST00000561065 PET117Q6UWS5 81 aa9.57□□□□□ -0.88
LMX1B-204ENST00000561065 AKR1D1P51857 326 aa9.56□□□□□ -0.88
LMX1B-204ENST00000561065 MIR7-3HGQ8N6C7 128 aa9.56□□□□□ -0.88
LMX1B-204ENST00000561065 IGKV2-28A0A075B6P5 120 aa9.56□□□□□ -0.88
LMX1B-204ENST00000561065 IGKV2D-26A0A0A0MRZ7 120 aa9.56□□□□□ -0.88
LMX1B-204ENST00000561065 IGKV2D-28P01615 120 aa9.56□□□□□ -0.88
LMX1B-204ENST00000561065 BOD1L2Q8IYS8 172 aa9.56□□□□□ -0.88
LMX1B-204ENST00000561065 MIEN1Q9BRT3 115 aa9.56□□□□□ -0.88
LMX1B-204ENST00000561065 PMCHL2Q9BQD1 86 aa9.55□□□□□ -0.88
LMX1B-204ENST00000561065 C20orf202A1L168 122 aa9.54□□□□□ -0.88
LMX1B-204ENST00000561065 COA6Q5JTJ3 125 aaKnown RBP9.54□□□□□ -0.88
LMX1B-204ENST00000561065 E9PLD3 99 aa9.52□□□□□ -0.89
LMX1B-204ENST00000561065 LINC01545Q5VT33 79 aa9.52□□□□□ -0.89
LMX1B-204ENST00000561065 FAM19A1Q7Z5A9 133 aa9.52□□□□□ -0.89
LMX1B-204ENST00000561065 TMEM126AQ9H061 195 aa9.52□□□□□ -0.89
LMX1B-204ENST00000561065 CBY1Q9Y3M2 126 aa9.5□□□□□ -0.89
LMX1B-204ENST00000561065 LOC107984156A0A0G2JMH3 177 aa9.49□□□□□ -0.89
LMX1B-204ENST00000561065 CRYGAP11844 174 aa9.49□□□□□ -0.89
LMX1B-204ENST00000561065 ARL17AQ8IVW1 177 aa9.49□□□□□ -0.89
LMX1B-204ENST00000561065 TSPEAR-AS2P59090 65 aa9.48□□□□□ -0.89
LMX1B-204ENST00000561065 KRTDAPP60985 99 aa9.48□□□□□ -0.89
LMX1B-204ENST00000561065 TRBV10-2A0A0K0K1G8 114 aa9.47□□□□□ -0.89
LMX1B-204ENST00000561065 PRYO14603 147 aa9.47□□□□□ -0.89
LMX1B-204ENST00000561065 C3orf79P0CE67 100 aa9.47□□□□□ -0.89
LMX1B-204ENST00000561065 KRTAP13-1Q8IUC0 172 aa9.47□□□□□ -0.89
LMX1B-204ENST00000561065 A0A087X002 238 aa9.46□□□□□ -0.9
LMX1B-204ENST00000561065 TMEM238C9JI98 176 aa9.46□□□□□ -0.9
LMX1B-204ENST00000561065 NDUFC2O95298 119 aa9.46□□□□□ -0.9
LMX1B-204ENST00000561065 Q8NDZ9 215 aa9.46□□□□□ -0.9
LMX1B-204ENST00000561065 S100A2P29034 98 aa9.45□□□□□ -0.9
LMX1B-204ENST00000561065 KCNQ1DNQ9H478 68 aa9.45□□□□□ -0.9
LMX1B-204ENST00000561065 SPANXB1Q9NS25 103 aaPredicted RBP9.45□□□□□ -0.9
LMX1B-204ENST00000561065 A0A0J9YXY3 114 aa9.44□□□□□ -0.9
LMX1B-204ENST00000561065 ETDCA0A1B0GVM5 59 aa9.44□□□□□ -0.9
LMX1B-204ENST00000561065 NCR3O14931 201 aa9.44□□□□□ -0.9
LMX1B-204ENST00000561065 S100A6P06703 90 aa9.44□□□□□ -0.9
LMX1B-204ENST00000561065 FAM229BQ4G0N7 80 aa9.44□□□□□ -0.9
LMX1B-204ENST00000561065 S100A7L2Q5SY68 101 aa9.44□□□□□ -0.9
LMX1B-204ENST00000561065 LINC00337Q8N6G1 96 aa9.44□□□□□ -0.9
LMX1B-204ENST00000561065 COPS9Q8WXC6 57 aa9.44□□□□□ -0.9
LMX1B-204ENST00000561065 TIMM17BO60830 172 aa9.43□□□□□ -0.9
LMX1B-204ENST00000561065 SNRPEP62304 92 aaKnown RBP9.43□□□□□ -0.9
LMX1B-204ENST00000561065 PRLHP81277 87 aa9.43□□□□□ -0.9
LMX1B-204ENST00000561065 DAND5Q8N907 189 aa9.43□□□□□ -0.9
LMX1B-204ENST00000561065 ZNF706Q9Y5V0 76 aaPredicted RBP9.43□□□□□ -0.9
LMX1B-204ENST00000561065 ZNF815PA8K554 130 aa9.42□□□□□ -0.9
LMX1B-204ENST00000561065 DDTP30046 118 aa9.42□□□□□ -0.9
LMX1B-204ENST00000561065 TYMSOSQ8TAI1 123 aa9.42□□□□□ -0.9
LMX1B-204ENST00000561065 HIGD2AQ9BW72 106 aa9.42□□□□□ -0.9
LMX1B-204ENST00000561065 ANAPC11Q9NYG5 84 aa9.41□□□□□ -0.9
LMX1B-204ENST00000561065 TRBV10-3A0A0K0K1G6 114 aa9.4□□□□□ -0.9
LMX1B-204ENST00000561065 HINT1P49773 126 aaPredicted RBP9.4□□□□□ -0.9
LMX1B-204ENST00000561065 SCGB1D4Q6XE38 83 aa9.39□□□□□ -0.91
LMX1B-204ENST00000561065 JOSD1Q15040 202 aaPredicted RBP9.38□□□□□ -0.91
LMX1B-204ENST00000561065 KRTAP13-2Q52LG2 175 aa9.38□□□□□ -0.91
LMX1B-204ENST00000561065 LINC00518Q8N0U6 118 aa9.38□□□□□ -0.91
LMX1B-204ENST00000561065 HSBP1L1C9JCN9 74 aa9.37□□□□□ -0.91
LMX1B-204ENST00000561065 SPRR1AP35321 89 aa9.37□□□□□ -0.91
LMX1B-204ENST00000561065 SPANXCQ9NY87 97 aa9.37□□□□□ -0.91
LMX1B-204ENST00000561065 ADAMTSL4-AS1Q5T5F5 129 aa9.36□□□□□ -0.91
LMX1B-204ENST00000561065 TSPAN13O95857 204 aa9.35□□□□□ -0.91
LMX1B-204ENST00000561065 CTAG1AP78358 180 aa9.35□□□□□ -0.91
LMX1B-204ENST00000561065 PRR4Q16378 134 aa9.35□□□□□ -0.91
LMX1B-204ENST00000561065 Q6ZVH6 145 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms