RNA–Protein interactions for RNA: ENST00000561040.1

MEIS3-209, Transcript of Meis homeobox 3, humanhuman

TSL 2

Gene MEIS3, Length 1,809 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3-209ENST00000561040 NOTCH1P46531 2555 aa11.01□□□□□ -0.65
MEIS3-209ENST00000561040 IGKV2-28A0A075B6P5 120 aa11□□□□□ -0.65
MEIS3-209ENST00000561040 IGKV2D-28P01615 120 aa11□□□□□ -0.65
MEIS3-209ENST00000561040 RPL28P46779 137 aaKnown RBP11□□□□□ -0.65
MEIS3-209ENST00000561040 C3orf22Q8N5N4 141 aa11□□□□□ -0.65
MEIS3-209ENST00000561040 F8WDY8 70 aa11□□□□□ -0.65
MEIS3-209ENST00000561040 A0A1B0GX51 115 aa10.99□□□□□ -0.65
MEIS3-209ENST00000561040 KRTAP26-1Q6PEX3 210 aa10.99□□□□□ -0.65
MEIS3-209ENST00000561040 LINC00337Q8N6G1 96 aa10.99□□□□□ -0.65
MEIS3-209ENST00000561040 B9D2Q9BPU9 175 aa10.99□□□□□ -0.65
MEIS3-209ENST00000561040 ZNF561-AS1K7EIQ3 104 aa10.98□□□□□ -0.65
MEIS3-209ENST00000561040 C9orf153Q5TBE3 101 aa10.98□□□□□ -0.65
MEIS3-209ENST00000561040 UNQ6190/PRO20217Q6UXQ8 127 aa10.98□□□□□ -0.65
MEIS3-209ENST00000561040 LINC00526Q96FQ7 95 aa10.98□□□□□ -0.65
MEIS3-209ENST00000561040 LINC00588Q9Y4M8 146 aa10.97□□□□□ -0.65
MEIS3-209ENST00000561040 NBEAL1Q6ZS30 2694 aa10.96□□□□□ -0.65
MEIS3-209ENST00000561040 FAM236AA0A1B0GUQ0 79 aa10.96□□□□□ -0.65
MEIS3-209ENST00000561040 FAM236BA0A1B0GV22 79 aa10.96□□□□□ -0.65
MEIS3-209ENST00000561040 INAFM2P0DMQ5 153 aa10.96□□□□□ -0.65
MEIS3-209ENST00000561040 CLEC2BQ92478 149 aa10.96□□□□□ -0.65
MEIS3-209ENST00000561040 C2orf48Q96LS8 159 aa10.96□□□□□ -0.65
MEIS3-209ENST00000561040 UPK3BQ9BT76 320 aa10.96□□□□□ -0.65
MEIS3-209ENST00000561040 TRACP01848 142 aa10.95□□□□□ -0.66
MEIS3-209ENST00000561040 SDIM1Q6ZPB5 146 aa10.95□□□□□ -0.66
MEIS3-209ENST00000561040 C6orf223Q8N319 242 aa10.95□□□□□ -0.66
MEIS3-209ENST00000561040 RPS28P62857 69 aaKnown RBP10.95□□□□□ -0.66
MEIS3-209ENST00000561040 IGKV2D-24A0A075B6R9 120 aa10.94□□□□□ -0.66
MEIS3-209ENST00000561040 H0YGX0 51 aa10.94□□□□□ -0.66
MEIS3-209ENST00000561040 J3KT08 172 aa10.94□□□□□ -0.66
MEIS3-209ENST00000561040 C10orf25Q5T742 122 aa10.94□□□□□ -0.66
MEIS3-209ENST00000561040 RMI2Q96E14 147 aa10.94□□□□□ -0.66
MEIS3-209ENST00000561040 C9orf116Q5BN46 136 aaPredicted RBP10.93□□□□□ -0.66
MEIS3-209ENST00000561040 OR13C6PQ8NH95 151 aa10.93□□□□□ -0.66
MEIS3-209ENST00000561040 CAMK2N2Q96S95 79 aa10.93□□□□□ -0.66
MEIS3-209ENST00000561040 ATOX1O00244 68 aa10.92□□□□□ -0.66
MEIS3-209ENST00000561040 C5orf47Q569G3 176 aa10.92□□□□□ -0.66
MEIS3-209ENST00000561040 SMIM11BQ8TCY0 68 aa10.92□□□□□ -0.66
MEIS3-209ENST00000561040 C15orf56Q8N910 161 aa10.91□□□□□ -0.66
MEIS3-209ENST00000561040 C6orf48Q9UBA6 75 aa10.91□□□□□ -0.66
MEIS3-209ENST00000561040 COX7CP15954 63 aa10.91□□□□□ -0.66
MEIS3-209ENST00000561040 MGAM2Q2M2H8 2515 aa10.9□□□□□ -0.66
MEIS3-209ENST00000561040 CRYGAP11844 174 aa10.9□□□□□ -0.66
MEIS3-209ENST00000561040 HUWE1Q7Z6Z7 4374 aaKnown RBP10.89□□□□□ -0.67
MEIS3-209ENST00000561040 HIGD2BQ4VC39 106 aa10.89□□□□□ -0.67
MEIS3-209ENST00000561040 Q9HAA7 133 aa10.88□□□□□ -0.67
MEIS3-209ENST00000561040 S100A7L2Q5SY68 101 aa10.85□□□□□ -0.67
MEIS3-209ENST00000561040 Q6ZRU5 148 aa10.85□□□□□ -0.67
MEIS3-209ENST00000561040 NDUFC2-KCTD14E9PQ53 114 aa10.84□□□□□ -0.67
MEIS3-209ENST00000561040 DNAL4O96015 105 aa10.84□□□□□ -0.67
MEIS3-209ENST00000561040 HIST1H4AP62805 103 aaKnown RBP10.84□□□□□ -0.67
MEIS3-209ENST00000561040 GAGE2AQ6NT46 116 aa10.84□□□□□ -0.67
MEIS3-209ENST00000561040 BAALC-AS2P0C853 105 aa10.84□□□□□ -0.67
MEIS3-209ENST00000561040 SYCNQ0VAF6 134 aa10.84□□□□□ -0.67
MEIS3-209ENST00000561040 FAM218AQ96MZ4 157 aa10.83□□□□□ -0.68
MEIS3-209ENST00000561040 NCR3O14931 201 aa10.82□□□□□ -0.68
MEIS3-209ENST00000561040 TMEM258P61165 79 aa10.82□□□□□ -0.68
MEIS3-209ENST00000561040 PRR3P79522 188 aaKnown RBP10.82□□□□□ -0.68
MEIS3-209ENST00000561040 APLNQ9ULZ1 77 aa10.82□□□□□ -0.68
MEIS3-209ENST00000561040 NUPR2A6NF83 97 aa10.81□□□□□ -0.68
MEIS3-209ENST00000561040 DNHD1Q96M86 4753 aa10.81□□□□□ -0.68
MEIS3-209ENST00000561040 UBE2DNLQ8IWF7 75 aa10.81□□□□□ -0.68
MEIS3-209ENST00000561040 SMCR5Q8TEV8 140 aa10.8□□□□□ -0.68
MEIS3-209ENST00000561040 IGLV6-57P01721 117 aa10.79□□□□□ -0.68
MEIS3-209ENST00000561040 Q8NDZ9 215 aa10.79□□□□□ -0.68
MEIS3-209ENST00000561040 USP17L23D6RBM5 183 aa10.79□□□□□ -0.68
MEIS3-209ENST00000561040 RPL18AQ02543 176 aaKnown RBP10.79□□□□□ -0.68
MEIS3-209ENST00000561040 Q6JHZ5 121 aa10.79□□□□□ -0.68
MEIS3-209ENST00000561040 TLX1NBP0CAT3 122 aa10.78□□□□□ -0.68
MEIS3-209ENST00000561040 XAGE1AQ9HD64 81 aa10.78□□□□□ -0.68
MEIS3-209ENST00000561040 A0A087WYN8 130 aa10.77□□□□□ -0.68
MEIS3-209ENST00000561040 DNAH9Q9NYC9 4486 aa10.76□□□□□ -0.69
MEIS3-209ENST00000561040 LECT2O14960 151 aa10.76□□□□□ -0.69
MEIS3-209ENST00000561040 M0R378 163 aa10.75□□□□□ -0.69
MEIS3-209ENST00000561040 VPREB1P12018 145 aa10.75□□□□□ -0.69
MEIS3-209ENST00000561040 C6orf99Q4VX62 202 aa10.75□□□□□ -0.69
MEIS3-209ENST00000561040 SERP2Q8N6R1 65 aa10.75□□□□□ -0.69
MEIS3-209ENST00000561040 FAM19A5Q7Z5A7 132 aaPredicted RBP10.74□□□□□ -0.69
MEIS3-209ENST00000561040 Q6ZRP5 223 aa10.74□□□□□ -0.69
MEIS3-209ENST00000561040 LINC00167Q96N53 147 aa10.74□□□□□ -0.69
MEIS3-209ENST00000561040 ORMDL1Q9P0S3 153 aa10.73□□□□□ -0.69
MEIS3-209ENST00000561040 TRAV23DV6A0A075B6W5 121 aa10.72□□□□□ -0.69
MEIS3-209ENST00000561040 Q8N814 137 aa10.72□□□□□ -0.69
MEIS3-209ENST00000561040 TRBV10-3A0A0K0K1G6 114 aa10.72□□□□□ -0.69
MEIS3-209ENST00000561040 TRBV7-6A0A0J9YX20 115 aa10.71□□□□□ -0.69
MEIS3-209ENST00000561040 ATP5EP2Q5VTU8 51 aa10.71□□□□□ -0.69
MEIS3-209ENST00000561040 DIRC1Q969H9 104 aa10.71□□□□□ -0.69
MEIS3-209ENST00000561040 PLA2G2DQ9UNK4 145 aa10.71□□□□□ -0.69
MEIS3-209ENST00000561040 CASC10Q5T4H9 136 aa10.7□□□□□ -0.7
MEIS3-209ENST00000561040 OBSCN-AS1Q96MR7 158 aa10.7□□□□□ -0.7
MEIS3-209ENST00000561040 COL7A1Q02388 2944 aa10.7□□□□□ -0.7
MEIS3-209ENST00000561040 LINC00575Q6W349 94 aa10.7□□□□□ -0.7
MEIS3-209ENST00000561040 STAB2Q8WWQ8 2551 aa10.69□□□□□ -0.7
MEIS3-209ENST00000561040 H3BQ85 93 aa10.68□□□□□ -0.7
MEIS3-209ENST00000561040 PSCAO43653 123 aa10.68□□□□□ -0.7
MEIS3-209ENST00000561040 C14orf177Q52M58 125 aa10.68□□□□□ -0.7
MEIS3-209ENST00000561040 C22orf24Q9Y442 160 aa10.68□□□□□ -0.7
MEIS3-209ENST00000561040 LOC107984640A0A0U1RRK4 108 aa10.68□□□□□ -0.7
MEIS3-209ENST00000561040 ZNF73O43830 326 aaPredicted RBP10.68□□□□□ -0.7
MEIS3-209ENST00000561040 SLPIP03973 132 aa10.68□□□□□ -0.7
MEIS3-209ENST00000561040 C9orf129Q5T035 196 aaKnown RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms