RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 M0R378 163 aa9.45□□□□□ -0.9
SNX1-213ENST00000561026 IGKV2D-26A0A0A0MRZ7 120 aa9.43□□□□□ -0.9
SNX1-213ENST00000561026 LINC00304Q8N9R0 145 aa9.43□□□□□ -0.9
SNX1-213ENST00000561026 PLEKHB2Q96CS7 222 aa9.42□□□□□ -0.9
SNX1-213ENST00000561026 CHTOPQ9Y3Y2 248 aaKnown RBP9.42□□□□□ -0.9
SNX1-213ENST00000561026 APOC3P02656 99 aa9.41□□□□□ -0.9
SNX1-213ENST00000561026 LINC00158P58513 81 aa9.41□□□□□ -0.9
SNX1-213ENST00000561026 CBLN2Q8IUK8 224 aa9.4□□□□□ -0.9
SNX1-213ENST00000561026 TMEM223A0PJW6 202 aa9.39□□□□□ -0.91
SNX1-213ENST00000561026 SNAPINO95295 136 aa9.39□□□□□ -0.91
SNX1-213ENST00000561026 RETNLBQ9BQ08 111 aa9.39□□□□□ -0.91
SNX1-213ENST00000561026 TRAV12-1A0A0B4J245 112 aa9.38□□□□□ -0.91
SNX1-213ENST00000561026 CTAG1AP78358 180 aa9.38□□□□□ -0.91
SNX1-213ENST00000561026 SVBPQ8N300 66 aa9.38□□□□□ -0.91
SNX1-213ENST00000561026 A0A0U1RRA0 63 aa9.37□□□□□ -0.91
SNX1-213ENST00000561026 IFI27L1Q96BM0 104 aa9.37□□□□□ -0.91
SNX1-213ENST00000561026 CHCHD1Q96BP2 118 aaKnown RBP9.37□□□□□ -0.91
SNX1-213ENST00000561026 HIGD2AQ9BW72 106 aa9.37□□□□□ -0.91
SNX1-213ENST00000561026 A0A0U1RQV1 116 aa9.37□□□□□ -0.91
SNX1-213ENST00000561026 NDUFA5Q16718 116 aa9.37□□□□□ -0.91
SNX1-213ENST00000561026 YPEL4Q96NS1 127 aa9.36□□□□□ -0.91
SNX1-213ENST00000561026 SMIM13P0DJ93 91 aa9.35□□□□□ -0.91
SNX1-213ENST00000561026 C3orf22Q8N5N4 141 aa9.35□□□□□ -0.91
SNX1-213ENST00000561026 ATP6V1G1O75348 118 aa9.34□□□□□ -0.91
SNX1-213ENST00000561026 IGLV7-46A0A075B6I9 117 aa9.33□□□□□ -0.92
SNX1-213ENST00000561026 TPRXLQ17RH7 258 aa9.33□□□□□ -0.92
SNX1-213ENST00000561026 BOD1L2Q8IYS8 172 aa9.33□□□□□ -0.92
SNX1-213ENST00000561026 SPRR4Q96PI1 79 aa9.33□□□□□ -0.92
SNX1-213ENST00000561026 HERV-K104P63124 156 aa9.32□□□□□ -0.92
SNX1-213ENST00000561026 MEIG1Q5JSS6 88 aa9.32□□□□□ -0.92
SNX1-213ENST00000561026 SPAG11AQ6PDA7 123 aa9.31□□□□□ -0.92
SNX1-213ENST00000561026 MIR7-3HGQ8N6C7 128 aa9.31□□□□□ -0.92
SNX1-213ENST00000561026 CDIP1Q9H305 208 aa9.31□□□□□ -0.92
SNX1-213ENST00000561026 KCNQ1DNQ9H478 68 aa9.31□□□□□ -0.92
SNX1-213ENST00000561026 LINC00587B1AMM8 73 aa9.3□□□□□ -0.92
SNX1-213ENST00000561026 PRYO14603 147 aa9.3□□□□□ -0.92
SNX1-213ENST00000561026 SPRR1AP35321 89 aa9.3□□□□□ -0.92
SNX1-213ENST00000561026 FAM19A2Q8N3H0 131 aa9.3□□□□□ -0.92
SNX1-213ENST00000561026 LINC00337Q8N6G1 96 aa9.3□□□□□ -0.92
SNX1-213ENST00000561026 ZNF706Q9Y5V0 76 aaPredicted RBP9.3□□□□□ -0.92
SNX1-213ENST00000561026 NCR3O14931 201 aa9.29□□□□□ -0.92
SNX1-213ENST00000561026 HSBP1O75506 76 aa9.29□□□□□ -0.92
SNX1-213ENST00000561026 NDUFA12Q9UI09 145 aa9.29□□□□□ -0.92
SNX1-213ENST00000561026 MYMXA0A1B0GTQ4 84 aa9.27□□□□□ -0.93
SNX1-213ENST00000561026 KRTAP4-16G5E9R7 235 aaPredicted RBP9.27□□□□□ -0.93
SNX1-213ENST00000561026 FAT4Q6V0I7 4981 aa9.27□□□□□ -0.93
SNX1-213ENST00000561026 SMCR5Q8TEV8 140 aa9.26□□□□□ -0.93
SNX1-213ENST00000561026 MAP1LC3CQ9BXW4 147 aa9.26□□□□□ -0.93
SNX1-213ENST00000561026 PPDPFQ9H3Y8 114 aa9.26□□□□□ -0.93
SNX1-213ENST00000561026 TRBV10-3A0A0K0K1G6 114 aa9.25□□□□□ -0.93
SNX1-213ENST00000561026 ETDCA0A1B0GVM5 59 aa9.25□□□□□ -0.93
SNX1-213ENST00000561026 H0Y8G0 127 aa9.25□□□□□ -0.93
SNX1-213ENST00000561026 C4orf48Q5BLP8 95 aa9.25□□□□□ -0.93
SNX1-213ENST00000561026 LOC107984156A0A0G2JMH3 177 aa9.24□□□□□ -0.93
SNX1-213ENST00000561026 TSPEAR-AS2P59090 65 aa9.24□□□□□ -0.93
SNX1-213ENST00000561026 ARL17AQ8IVW1 177 aa9.24□□□□□ -0.93
SNX1-213ENST00000561026 DAND5Q8N907 189 aa9.24□□□□□ -0.93
SNX1-213ENST00000561026 Q8NBF4 154 aa9.24□□□□□ -0.93
SNX1-213ENST00000561026 LEPROTO15243 131 aa9.23□□□□□ -0.93
SNX1-213ENST00000561026 LEPROTL1O95214 131 aa9.23□□□□□ -0.93
SNX1-213ENST00000561026 TRGC2P03986 189 aa9.23□□□□□ -0.93
SNX1-213ENST00000561026 S100A12P80511 92 aa9.23□□□□□ -0.93
SNX1-213ENST00000561026 LCE2AQ5TA79 106 aaPredicted RBP9.23□□□□□ -0.93
SNX1-213ENST00000561026 FP248Q71RG6 208 aaPredicted RBP9.23□□□□□ -0.93
SNX1-213ENST00000561026 PLNP26678 52 aa9.22□□□□□ -0.93
SNX1-213ENST00000561026 LINC00310P59036 64 aa9.22□□□□□ -0.93
SNX1-213ENST00000561026 LINC00483Q53H64 154 aa9.22□□□□□ -0.93
SNX1-213ENST00000561026 B5MCH6 92 aa9.21□□□□□ -0.94
SNX1-213ENST00000561026 SERF1AO75920 110 aa9.21□□□□□ -0.94
SNX1-213ENST00000561026 TRBV10-2A0A0K0K1G8 114 aa9.2□□□□□ -0.94
SNX1-213ENST00000561026 SPINK1P00995 79 aa9.2□□□□□ -0.94
SNX1-213ENST00000561026 MUC17Q685J3 4493 aa9.19□□□□□ -0.94
SNX1-213ENST00000561026 J3QQQ9 107 aa9.19□□□□□ -0.94
SNX1-213ENST00000561026 DDTP30046 118 aa9.19□□□□□ -0.94
SNX1-213ENST00000561026 GAGE2AQ6NT46 116 aa9.19□□□□□ -0.94
SNX1-213ENST00000561026 HSPB8Q9UJY1 196 aa9.19□□□□□ -0.94
SNX1-213ENST00000561026 ERC2-IT1O76042 136 aa9.18□□□□□ -0.94
SNX1-213ENST00000561026 DPM2O94777 84 aa9.18□□□□□ -0.94
SNX1-213ENST00000561026 NMUP48645 174 aa9.17□□□□□ -0.94
SNX1-213ENST00000561026 HERVK_113P61574 105 aa9.17□□□□□ -0.94
SNX1-213ENST00000561026 SPANXB1Q9NS25 103 aaPredicted RBP9.17□□□□□ -0.94
SNX1-213ENST00000561026 FABP4P15090 132 aa9.16□□□□□ -0.94
SNX1-213ENST00000561026 KRTAP13-3Q3SY46 172 aa9.16□□□□□ -0.94
SNX1-213ENST00000561026 PMCHL2Q9BQD1 86 aa9.16□□□□□ -0.94
SNX1-213ENST00000561026 Q9BRP9 147 aa9.16□□□□□ -0.94
SNX1-213ENST00000561026 LGALS3P17931 250 aaKnown RBP9.15□□□□□ -0.94
SNX1-213ENST00000561026 Q6ZRX8 168 aa9.15□□□□□ -0.94
SNX1-213ENST00000561026 MIEN1Q9BRT3 115 aa9.15□□□□□ -0.94
SNX1-213ENST00000561026 IGLV9-49A0A0B4J1Y8 123 aa9.14□□□□□ -0.95
SNX1-213ENST00000561026 NDUFC2O95298 119 aa9.14□□□□□ -0.95
SNX1-213ENST00000561026 IGLV6-57P01721 117 aa9.14□□□□□ -0.95
SNX1-213ENST00000561026 IGKCP01834 107 aa9.14□□□□□ -0.95
SNX1-213ENST00000561026 MOBPQ13875 183 aa9.14□□□□□ -0.95
SNX1-213ENST00000561026 SSBP3-AS1Q7Z2R9 100 aa9.14□□□□□ -0.95
SNX1-213ENST00000561026 KRTAP9-2Q9BYQ4 174 aa9.14□□□□□ -0.95
SNX1-213ENST00000561026 S100A7L2Q5SY68 101 aa9.13□□□□□ -0.95
SNX1-213ENST00000561026 RPS29P62273 56 aaKnown RBP9.12□□□□□ -0.95
SNX1-213ENST00000561026 EIF4EBP3O60516 100 aaPredicted RBP9.11□□□□□ -0.95
SNX1-213ENST00000561026 ADAMTSL4-AS1Q5T5F5 129 aa9.11□□□□□ -0.95
SNX1-213ENST00000561026 SOSTDC1Q6X4U4 206 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 139.1 ms