RNA–Protein interactions for RNA: ENST00000560634.1

CSPG4P11-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 11, humanhuman

BASIC

Gene CSPG4P11, Length 4,910 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P11-201ENST00000560634 WDR87Q6ZQQ6 2873 aa9.2□□□□□ -0.94
CSPG4P11-201ENST00000560634 PTPRSQ13332 1948 aa9.19□□□□□ -0.94
CSPG4P11-201ENST00000560634 A0A1B0GU69 56 aa9.18□□□□□ -0.94
CSPG4P11-201ENST00000560634 ACYP2P14621 99 aa9.18□□□□□ -0.94
CSPG4P11-201ENST00000560634 NHLRC4P0CG21 123 aaPredicted RBP9.18□□□□□ -0.94
CSPG4P11-201ENST00000560634 SMCPP49901 116 aaPredicted RBP9.18□□□□□ -0.94
CSPG4P11-201ENST00000560634 EXPH5Q8NEV8 1989 aa9.18□□□□□ -0.94
CSPG4P11-201ENST00000560634 LRP4O75096 1905 aa9.18□□□□□ -0.94
CSPG4P11-201ENST00000560634 IGKV2D-30A0A075B6S6 120 aa9.17□□□□□ -0.94
CSPG4P11-201ENST00000560634 IGKV2-30P06310 120 aa9.17□□□□□ -0.94
CSPG4P11-201ENST00000560634 FAM19A4Q96LR4 140 aa9.17□□□□□ -0.94
CSPG4P11-201ENST00000560634 PRO0461Q9UI25 63 aa9.17□□□□□ -0.94
CSPG4P11-201ENST00000560634 LINC00167Q96N53 147 aa9.16□□□□□ -0.94
CSPG4P11-201ENST00000560634 ANKRD11Q6UB99 2663 aaPredicted RBP9.16□□□□□ -0.94
CSPG4P11-201ENST00000560634 FHL3Q13643 280 aa9.15□□□□□ -0.94
CSPG4P11-201ENST00000560634 FASNP49327 2511 aaKnown RBP9.15□□□□□ -0.94
CSPG4P11-201ENST00000560634 H3BNG1 76 aa9.14□□□□□ -0.95
CSPG4P11-201ENST00000560634 Q8NBF4 154 aa9.14□□□□□ -0.95
CSPG4P11-201ENST00000560634 LOC110117498A0A087WWA1 95 aa9.14□□□□□ -0.95
CSPG4P11-201ENST00000560634 C6orf48Q9UBA6 75 aa9.14□□□□□ -0.95
CSPG4P11-201ENST00000560634 ELOF1P60002 83 aaKnown RBP9.14□□□□□ -0.95
CSPG4P11-201ENST00000560634 C7orf65Q6ZTY9 151 aa9.13□□□□□ -0.95
CSPG4P11-201ENST00000560634 SPTBN4Q9H254 2564 aa9.13□□□□□ -0.95
CSPG4P11-201ENST00000560634 SPAG11AQ6PDA7 123 aa9.12□□□□□ -0.95
CSPG4P11-201ENST00000560634 Q6ZQT0 140 aa9.12□□□□□ -0.95
CSPG4P11-201ENST00000560634 Q9UF83 564 aa9.12□□□□□ -0.95
CSPG4P11-201ENST00000560634 FAM218AQ96MZ4 157 aa9.11□□□□□ -0.95
CSPG4P11-201ENST00000560634 SERTAD4-AS1Q5TG53 156 aa9.1□□□□□ -0.95
CSPG4P11-201ENST00000560634 RAI1Q7Z5J4 1906 aaPredicted RBP9.1□□□□□ -0.95
CSPG4P11-201ENST00000560634 C4orf26Q17RF5 130 aa9.09□□□□□ -0.95
CSPG4P11-201ENST00000560634 PCNTO95613 3336 aa9.09□□□□□ -0.95
CSPG4P11-201ENST00000560634 MOBPQ13875 183 aa9.09□□□□□ -0.95
CSPG4P11-201ENST00000560634 MTORP42345 2549 aa9.09□□□□□ -0.95
CSPG4P11-201ENST00000560634 TRAV22A0A0B4J277 110 aa9.09□□□□□ -0.95
CSPG4P11-201ENST00000560634 Q6ZRX8 168 aa9.08□□□□□ -0.96
CSPG4P11-201ENST00000560634 ADAMTS20P59510 1910 aa9.08□□□□□ -0.96
CSPG4P11-201ENST00000560634 LINC00476Q8WZB0 136 aa9.07□□□□□ -0.96
CSPG4P11-201ENST00000560634 SPACA4Q8TDM5 124 aa9.06□□□□□ -0.96
CSPG4P11-201ENST00000560634 CENPFP49454 3210 aa9.05□□□□□ -0.96
CSPG4P11-201ENST00000560634 DNAH12Q6ZR08 3092 aa9.05□□□□□ -0.96
CSPG4P11-201ENST00000560634 VPREB1P12018 145 aa9.05□□□□□ -0.96
CSPG4P11-201ENST00000560634 TET2Q6N021 2002 aaPredicted RBP9.04□□□□□ -0.96
CSPG4P11-201ENST00000560634 C8orf87E5RJ46 101 aa9.04□□□□□ -0.96
CSPG4P11-201ENST00000560634 ATP11AUNQ6ZP68 121 aa9.04□□□□□ -0.96
CSPG4P11-201ENST00000560634 MDFIQ99750 246 aa9.04□□□□□ -0.96
CSPG4P11-201ENST00000560634 CPAMD8Q8IZJ3 1885 aa9.02□□□□□ -0.97
CSPG4P11-201ENST00000560634 ERC2-IT1O76042 136 aa9.02□□□□□ -0.97
CSPG4P11-201ENST00000560634 GVQW2A0A096LPI5 108 aaPredicted RBP9.02□□□□□ -0.97
CSPG4P11-201ENST00000560634 TRBV7-4A0A0J9YYF1 115 aa9.01□□□□□ -0.97
CSPG4P11-201ENST00000560634 TM2D3Q9BRN9 247 aa9.01□□□□□ -0.97
CSPG4P11-201ENST00000560634 COL5A1P20908 1838 aaPredicted RBP9.01□□□□□ -0.97
CSPG4P11-201ENST00000560634 LINC00313P59037 77 aa9.01□□□□□ -0.97
CSPG4P11-201ENST00000560634 LOC101927531A0A1B0GV80 90 aa9□□□□□ -0.97
CSPG4P11-201ENST00000560634 CEP350Q5VT06 3117 aa9□□□□□ -0.97
CSPG4P11-201ENST00000560634 C16orf90A8MZG2 172 aa9□□□□□ -0.97
CSPG4P11-201ENST00000560634 CYP4F30PQ9H0H9 118 aa8.99□□□□□ -0.97
CSPG4P11-201ENST00000560634 EPM2AB3EWF7 344 aa8.99□□□□□ -0.97
CSPG4P11-201ENST00000560634 Q6ZRP5 223 aa8.98□□□□□ -0.97
CSPG4P11-201ENST00000560634 PHF5AQ7RTV0 110 aaKnown RBP8.97□□□□□ -0.97
CSPG4P11-201ENST00000560634 FAM229AH3BQW9 127 aa8.96□□□□□ -0.97
CSPG4P11-201ENST00000560634 KLK9Q2XQG4 91 aa8.96□□□□□ -0.97
CSPG4P11-201ENST00000560634 LITAFQ99732 161 aa8.96□□□□□ -0.98
CSPG4P11-201ENST00000560634 BPTFQ12830 3046 aa8.95□□□□□ -0.98
CSPG4P11-201ENST00000560634 IGLV6-57P01721 117 aa8.95□□□□□ -0.98
CSPG4P11-201ENST00000560634 ST20-AS1Q8NBB2 130 aa8.94□□□□□ -0.98
CSPG4P11-201ENST00000560634 A8MWP4 228 aa8.94□□□□□ -0.98
CSPG4P11-201ENST00000560634 NBDYA0A0U1RRE5 68 aa8.93□□□□□ -0.98
CSPG4P11-201ENST00000560634 TYMSOSQ8TAI1 123 aa8.92□□□□□ -0.98
CSPG4P11-201ENST00000560634 ACANP16112 2415 aa8.92□□□□□ -0.98
CSPG4P11-201ENST00000560634 Q8NAQ8 132 aa8.92□□□□□ -0.98
CSPG4P11-201ENST00000560634 RTL8CO15255 209 aa8.91□□□□□ -0.98
CSPG4P11-201ENST00000560634 MRPL34Q9BQ48 92 aaKnown RBP8.91□□□□□ -0.98
CSPG4P11-201ENST00000560634 RPL37AP61513 92 aaKnown RBP8.9□□□□□ -0.99
CSPG4P11-201ENST00000560634 LINC00588Q9Y4M8 146 aa8.89□□□□□ -0.99
CSPG4P11-201ENST00000560634 DNAH10OSP0CZ25 163 aa8.89□□□□□ -0.99
CSPG4P11-201ENST00000560634 UQCR11O14957 56 aa8.88□□□□□ -0.99
CSPG4P11-201ENST00000560634 KLKP1Q107X0 134 aa8.88□□□□□ -0.99
CSPG4P11-201ENST00000560634 LINC01600Q96MT4 127 aa8.88□□□□□ -0.99
CSPG4P11-201ENST00000560634 FLNBO75369 2602 aaKnown RBP8.87□□□□□ -0.99
CSPG4P11-201ENST00000560634 KCNQ1DNQ9H478 68 aa8.87□□□□□ -0.99
CSPG4P11-201ENST00000560634 POLQO75417 2590 aa8.87□□□□□ -0.99
CSPG4P11-201ENST00000560634 K7EQZ3 153 aa8.86□□□□□ -0.99
CSPG4P11-201ENST00000560634 COA5Q86WW8 74 aa8.86□□□□□ -0.99
CSPG4P11-201ENST00000560634 EPG5Q9HCE0 2579 aa8.86□□□□□ -0.99
CSPG4P11-201ENST00000560634 IGLV8-61A0A075B6I0 122 aa8.86□□□□□ -0.99
CSPG4P11-201ENST00000560634 LINC00528Q8N1L1 170 aa8.86□□□□□ -0.99
CSPG4P11-201ENST00000560634 A8MUN3 132 aa8.85□□□□□ -0.99
CSPG4P11-201ENST00000560634 Q96NJ1 140 aa8.85□□□□□ -0.99
CSPG4P11-201ENST00000560634 SPINT4Q6UDR6 99 aa8.85□□□□□ -0.99
CSPG4P11-201ENST00000560634 IGLV1-50A0A075B6I6 118 aa8.84□□□□□ -0.99
CSPG4P11-201ENST00000560634 CHTF8P0CG12 524 aa8.83□□□□□ -1
CSPG4P11-201ENST00000560634 CD164Q04900 197 aa8.82□□□□□ -1
CSPG4P11-201ENST00000560634 PTPRBP23467 1997 aa8.82□□□□□ -1
CSPG4P11-201ENST00000560634 PRR15Q8IV56 129 aa8.81□□□□□ -1
CSPG4P11-201ENST00000560634 A0A0C4DFX4 3053 aa8.81□□□□□ -1
CSPG4P11-201ENST00000560634 KRTAP24-1Q3LI83 254 aa8.79□□□□□ -1
CSPG4P11-201ENST00000560634 SSBP3-AS1Q7Z2R9 100 aa8.79□□□□□ -1
CSPG4P11-201ENST00000560634 PLA2G1BP04054 148 aaKnown RBP8.79□□□□□ -1
CSPG4P11-201ENST00000560634 C8orf17Q9NRJ1 99 aa8.79□□□□□ -1
CSPG4P11-201ENST00000560634 IGFL1Q6UW32 110 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms