RNA–Protein interactions for RNA: ENST00000560619.2

SNRPCP18-201, Transcript of small nuclear ribonucleoprotein polypeptide C pseudogene 18, humanhuman

BASIC

Gene SNRPCP18, Length 439 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPCP18-201ENST00000560619 CIRBP-AS1Q8TBR5 109 aa7.1□□□□□ -1.27
SNRPCP18-201ENST00000560619 LITAFQ99732 161 aa7.1□□□□□ -1.27
SNRPCP18-201ENST00000560619 SPANXDQ9BXN6 97 aa7.1□□□□□ -1.27
SNRPCP18-201ENST00000560619 SPANXCQ9NY87 97 aa7.1□□□□□ -1.27
SNRPCP18-201ENST00000560619 PLAC8Q9NZF1 115 aa7.1□□□□□ -1.27
SNRPCP18-201ENST00000560619 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.1□□□□□ -1.27
SNRPCP18-201ENST00000560619 NPC2P61916 151 aa7.09□□□□□ -1.27
SNRPCP18-201ENST00000560619 ADAMTSL4-AS1Q5T5F5 129 aa7.09□□□□□ -1.27
SNRPCP18-201ENST00000560619 COPS9Q8WXC6 57 aa7.09□□□□□ -1.27
SNRPCP18-201ENST00000560619 KIAA1109Q2LD37 5005 aa7.08□□□□□ -1.28
SNRPCP18-201ENST00000560619 A0A096LNI7 61 aa7.08□□□□□ -1.28
SNRPCP18-201ENST00000560619 NDUFC2-KCTD14E9PQ53 114 aa7.08□□□□□ -1.28
SNRPCP18-201ENST00000560619 IFITM1P13164 125 aa7.08□□□□□ -1.28
SNRPCP18-201ENST00000560619 RPL18AQ02543 176 aaKnown RBP7.08□□□□□ -1.28
SNRPCP18-201ENST00000560619 A0A087WYN8 130 aa7.07□□□□□ -1.28
SNRPCP18-201ENST00000560619 M0R143 59 aa7.07□□□□□ -1.28
SNRPCP18-201ENST00000560619 MUSTN1Q8IVN3 82 aa7.07□□□□□ -1.28
SNRPCP18-201ENST00000560619 CEND1Q8N111 149 aa7.07□□□□□ -1.28
SNRPCP18-201ENST00000560619 DPH3Q96FX2 82 aa7.07□□□□□ -1.28
SNRPCP18-201ENST00000560619 HSPG2P98160 4391 aa7.07□□□□□ -1.28
SNRPCP18-201ENST00000560619 FAM229AH3BQW9 127 aa7.06□□□□□ -1.28
SNRPCP18-201ENST00000560619 PANO1I0J062 215 aa7.06□□□□□ -1.28
SNRPCP18-201ENST00000560619 HINT1P49773 126 aaPredicted RBP7.06□□□□□ -1.28
SNRPCP18-201ENST00000560619 RPL24P83731 157 aaKnown RBP7.06□□□□□ -1.28
SNRPCP18-201ENST00000560619 GAGE2EQ4V326 116 aa7.06□□□□□ -1.28
SNRPCP18-201ENST00000560619 LINC00308Q8TCZ7 52 aa7.06□□□□□ -1.28
SNRPCP18-201ENST00000560619 SND1-IT1Q9HBX3 110 aa7.06□□□□□ -1.28
SNRPCP18-201ENST00000560619 GAGE2DQ9UEU5 116 aa7.06□□□□□ -1.28
SNRPCP18-201ENST00000560619 RYR1P21817 5038 aa7.05□□□□□ -1.28
SNRPCP18-201ENST00000560619 IGKV2-24A0A0C4DH68 120 aa7.05□□□□□ -1.28
SNRPCP18-201ENST00000560619 TMEM238LA0A1B0GVL6 79 aa7.05□□□□□ -1.28
SNRPCP18-201ENST00000560619 A6NJY4 79 aa7.05□□□□□ -1.28
SNRPCP18-201ENST00000560619 CHTF8P0CG12 524 aa7.05□□□□□ -1.28
SNRPCP18-201ENST00000560619 GAGE2BQ13066 116 aa7.05□□□□□ -1.28
SNRPCP18-201ENST00000560619 Q6ZRP5 223 aa7.05□□□□□ -1.28
SNRPCP18-201ENST00000560619 BATFQ16520 125 aa7.04□□□□□ -1.28
SNRPCP18-201ENST00000560619 SOSTDC1Q6X4U4 206 aa7.04□□□□□ -1.28
SNRPCP18-201ENST00000560619 XAGE1AQ9HD64 81 aa7.04□□□□□ -1.28
SNRPCP18-201ENST00000560619 PLA2G1BP04054 148 aaKnown RBP7.03□□□□□ -1.28
SNRPCP18-201ENST00000560619 FXYD2P54710 66 aa7.03□□□□□ -1.28
SNRPCP18-201ENST00000560619 BVES-AS1Q5T3Y7 98 aa7.03□□□□□ -1.28
SNRPCP18-201ENST00000560619 PPDPFQ9H3Y8 114 aa7.03□□□□□ -1.28
SNRPCP18-201ENST00000560619 HERC2O95714 4834 aa7.03□□□□□ -1.28
SNRPCP18-201ENST00000560619 A4D1N5 150 aa7.02□□□□□ -1.29
SNRPCP18-201ENST00000560619 EIF4EBP3O60516 100 aaPredicted RBP7.02□□□□□ -1.29
SNRPCP18-201ENST00000560619 SMR3BP02814 79 aaPredicted RBP7.02□□□□□ -1.29
SNRPCP18-201ENST00000560619 LINC00528Q8N1L1 170 aa7.02□□□□□ -1.29
SNRPCP18-201ENST00000560619 LOC107984156A0A0G2JMH3 177 aa7.01□□□□□ -1.29
SNRPCP18-201ENST00000560619 A6NDN8 102 aa7.01□□□□□ -1.29
SNRPCP18-201ENST00000560619 HAMPP81172 84 aa7.01□□□□□ -1.29
SNRPCP18-201ENST00000560619 Q5VSD8 79 aa7.01□□□□□ -1.29
SNRPCP18-201ENST00000560619 ARL17AQ8IVW1 177 aa7.01□□□□□ -1.29
SNRPCP18-201ENST00000560619 C7orf33Q8WU49 177 aa7.01□□□□□ -1.29
SNRPCP18-201ENST00000560619 C9orf129Q5T035 196 aaKnown RBP7□□□□□ -1.29
SNRPCP18-201ENST00000560619 KRTAP17-1Q9BYP8 105 aa7□□□□□ -1.29
SNRPCP18-201ENST00000560619 NHP2Q9NX24 153 aaKnown RBP7□□□□□ -1.29
SNRPCP18-201ENST00000560619 PLA2G2DQ9UNK4 145 aa7□□□□□ -1.29
SNRPCP18-201ENST00000560619 A0A1W2PNN7 141 aa6.99□□□□□ -1.29
SNRPCP18-201ENST00000560619 RAB37Q96AX2 223 aa6.99□□□□□ -1.29
SNRPCP18-201ENST00000560619 SNHG12Q9BXW3 62 aa6.99□□□□□ -1.29
SNRPCP18-201ENST00000560619 NCR3O14931 201 aa6.98□□□□□ -1.29
SNRPCP18-201ENST00000560619 NDUFC2O95298 119 aa6.98□□□□□ -1.29
SNRPCP18-201ENST00000560619 A0A0B4J2C4 111 aa6.97□□□□□ -1.29
SNRPCP18-201ENST00000560619 NKAPP1Q8N9T2 125 aa6.97□□□□□ -1.29
SNRPCP18-201ENST00000560619 IGLV5-37A0A075B6J1 123 aa6.96□□□□□ -1.3
SNRPCP18-201ENST00000560619 TRAV13-2A0A0B4J235 113 aa6.96□□□□□ -1.3
SNRPCP18-201ENST00000560619 CFC1BP0CG36 223 aa6.96□□□□□ -1.3
SNRPCP18-201ENST00000560619 CFC1P0CG37 223 aa6.96□□□□□ -1.3
SNRPCP18-201ENST00000560619 VPREB1P12018 145 aa6.96□□□□□ -1.3
SNRPCP18-201ENST00000560619 KRTAP10-4P60372 401 aaPredicted RBP6.96□□□□□ -1.3
SNRPCP18-201ENST00000560619 RPL37AP61513 92 aaKnown RBP6.96□□□□□ -1.3
SNRPCP18-201ENST00000560619 FAM19A5Q7Z5A7 132 aaPredicted RBP6.96□□□□□ -1.3
SNRPCP18-201ENST00000560619 OR13C6PQ8NH95 151 aa6.96□□□□□ -1.3
SNRPCP18-201ENST00000560619 KRTAP4-5Q9BYR2 181 aa6.96□□□□□ -1.3
SNRPCP18-201ENST00000560619 FAT1Q14517 4588 aa6.95□□□□□ -1.3
SNRPCP18-201ENST00000560619 IGKV2-28A0A075B6P5 120 aa6.95□□□□□ -1.3
SNRPCP18-201ENST00000560619 A0A1B0GWB2 263 aa6.95□□□□□ -1.3
SNRPCP18-201ENST00000560619 FAM168BA1KXE4 195 aa6.95□□□□□ -1.3
SNRPCP18-201ENST00000560619 K7ERJ3 54 aa6.95□□□□□ -1.3
SNRPCP18-201ENST00000560619 IGKV2D-28P01615 120 aa6.95□□□□□ -1.3
SNRPCP18-201ENST00000560619 PRR3P79522 188 aaKnown RBP6.95□□□□□ -1.3
SNRPCP18-201ENST00000560619 LBHQ53QV2 105 aaPredicted RBP6.95□□□□□ -1.3
SNRPCP18-201ENST00000560619 COL5A1-AS1Q5SY13 56 aa6.95□□□□□ -1.3
SNRPCP18-201ENST00000560619 S100A7L2Q5SY68 101 aa6.95□□□□□ -1.3
SNRPCP18-201ENST00000560619 SERTAD4-AS1Q5TG53 156 aa6.95□□□□□ -1.3
SNRPCP18-201ENST00000560619 KRTAP7-1Q8IUC3 87 aa6.95□□□□□ -1.3
SNRPCP18-201ENST00000560619 Q8NDZ9 215 aa6.95□□□□□ -1.3
SNRPCP18-201ENST00000560619 PRO1854Q9UHT4 67 aa6.95□□□□□ -1.3
SNRPCP18-201ENST00000560619 TRBV10-2A0A0K0K1G8 114 aa6.94□□□□□ -1.3
SNRPCP18-201ENST00000560619 M0R378 163 aa6.94□□□□□ -1.3
SNRPCP18-201ENST00000560619 RPL13AP40429 203 aaKnown RBP6.94□□□□□ -1.3
SNRPCP18-201ENST00000560619 H7C2G1 150 aa6.93□□□□□ -1.3
SNRPCP18-201ENST00000560619 M0QXV9 152 aa6.93□□□□□ -1.3
SNRPCP18-201ENST00000560619 Q1RN00 199 aa6.93□□□□□ -1.3
SNRPCP18-201ENST00000560619 LINC00337Q8N6G1 96 aa6.93□□□□□ -1.3
SNRPCP18-201ENST00000560619 C22orf24Q9Y442 160 aa6.93□□□□□ -1.3
SNRPCP18-201ENST00000560619 INAFM2P0DMQ5 153 aa6.92□□□□□ -1.3
SNRPCP18-201ENST00000560619 PHF5AQ7RTV0 110 aaKnown RBP6.92□□□□□ -1.3
SNRPCP18-201ENST00000560619 TMEM126AQ9H061 195 aa6.92□□□□□ -1.3
SNRPCP18-201ENST00000560619 VPS13BQ7Z7G8 4022 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms