RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 NCR2O95944 276 aa3.33□□□□□ -1.88
HERC1-208ENST00000560462 CXCL5P42830 114 aa3.33□□□□□ -1.88
HERC1-208ENST00000560462 FOXA3P55318 350 aaPredicted RBP3.33□□□□□ -1.88
HERC1-208ENST00000560462 ORMDL2Q53FV1 153 aa3.33□□□□□ -1.88
HERC1-208ENST00000560462 AMMECR1LQ6DCA0 310 aa3.33□□□□□ -1.88
HERC1-208ENST00000560462 FAM231DQ6ZW35 169 aa3.33□□□□□ -1.88
HERC1-208ENST00000560462 DSTQ03001 7570 aaKnown RBP3.32□□□□□ -1.88
HERC1-208ENST00000560462 A8MWL6 223 aa3.32□□□□□ -1.88
HERC1-208ENST00000560462 PSPHP1O15172 72 aa3.32□□□□□ -1.88
HERC1-208ENST00000560462 ZNF25P17030 456 aaPredicted RBP3.32□□□□□ -1.88
HERC1-208ENST00000560462 TEX261Q6UWH6 196 aa3.32□□□□□ -1.88
HERC1-208ENST00000560462 Q6ZVH6 145 aa3.32□□□□□ -1.88
HERC1-208ENST00000560462 FAM19A2Q8N3H0 131 aa3.32□□□□□ -1.88
HERC1-208ENST00000560462 NUP35Q8NFH5 326 aa3.32□□□□□ -1.88
HERC1-208ENST00000560462 BORCS7Q96B45 105 aa3.32□□□□□ -1.88
HERC1-208ENST00000560462 SMIM7Q9BQ49 75 aa3.32□□□□□ -1.88
HERC1-208ENST00000560462 TMEM242Q9NWH2 141 aa3.32□□□□□ -1.88
HERC1-208ENST00000560462 TRBV6-5A0A0K0K1A5 114 aa3.31□□□□□ -1.88
HERC1-208ENST00000560462 HIGD1CA8MV81 97 aa3.31□□□□□ -1.88
HERC1-208ENST00000560462 I3L3M4 83 aa3.31□□□□□ -1.88
HERC1-208ENST00000560462 CD164Q04900 197 aa3.31□□□□□ -1.88
HERC1-208ENST00000560462 LINC01551Q86U37 167 aa3.31□□□□□ -1.88
HERC1-208ENST00000560462 OR5A1Q8NGJ0 315 aa3.31□□□□□ -1.88
HERC1-208ENST00000560462 MRAP2Q96G30 205 aa3.31□□□□□ -1.88
HERC1-208ENST00000560462 BTF3L4Q96K17 158 aa3.31□□□□□ -1.88
HERC1-208ENST00000560462 EIF5A2Q9GZV4 153 aaKnown RBP3.31□□□□□ -1.88
HERC1-208ENST00000560462 A0A1B0GUT8 65 aa3.3□□□□□ -1.88
HERC1-208ENST00000560462 C7orf77A4D0Y5 90 aa3.3□□□□□ -1.88
HERC1-208ENST00000560462 ZNF727A8MUV8 499 aa3.3□□□□□ -1.88
HERC1-208ENST00000560462 TCAPO15273 167 aa3.3□□□□□ -1.88
HERC1-208ENST00000560462 CCL25O15444 150 aa3.3□□□□□ -1.88
HERC1-208ENST00000560462 ESDP10768 282 aa3.3□□□□□ -1.88
HERC1-208ENST00000560462 XCL1P47992 114 aa3.3□□□□□ -1.88
HERC1-208ENST00000560462 UBE2AP49459 152 aa3.3□□□□□ -1.88
HERC1-208ENST00000560462 AMN1Q8IY45 258 aa3.3□□□□□ -1.88
HERC1-208ENST00000560462 C3orf22Q8N5N4 141 aa3.3□□□□□ -1.88
HERC1-208ENST00000560462 CAMK2N2Q96S95 79 aa3.3□□□□□ -1.88
HERC1-208ENST00000560462 TIMM17AQ99595 171 aa3.3□□□□□ -1.88
HERC1-208ENST00000560462 TMEM191AQ9H0A3 160 aa3.3□□□□□ -1.88
HERC1-208ENST00000560462 ST20Q9HBF5 79 aa3.3□□□□□ -1.88
HERC1-208ENST00000560462 SMIM26A0A096LP01 95 aa3.29□□□□□ -1.88
HERC1-208ENST00000560462 TRBV27A0A0K0K1C4 114 aa3.29□□□□□ -1.88
HERC1-208ENST00000560462 LINC00959A0A1B0GUT2 108 aa3.29□□□□□ -1.88
HERC1-208ENST00000560462 SRP19P09132 144 aaKnown RBP3.29□□□□□ -1.88
HERC1-208ENST00000560462 POLR2KP53803 58 aaKnown RBP3.29□□□□□ -1.88
HERC1-208ENST00000560462 RPL23P62829 140 aaKnown RBP3.29□□□□□ -1.88
HERC1-208ENST00000560462 BOD1L2Q8IYS8 172 aa3.29□□□□□ -1.88
HERC1-208ENST00000560462 OSTCQ9NRP0 149 aa3.29□□□□□ -1.88
HERC1-208ENST00000560462 V9GYV3 84 aa3.29□□□□□ -1.88
HERC1-208ENST00000560462 SPINK1P00995 79 aa3.28□□□□□ -1.88
HERC1-208ENST00000560462 FCER1GP30273 86 aa3.28□□□□□ -1.88
HERC1-208ENST00000560462 ADIRFQ15847 76 aa3.28□□□□□ -1.88
HERC1-208ENST00000560462 RNASE13Q5GAN3 156 aaKnown RBP3.28□□□□□ -1.88
HERC1-208ENST00000560462 Q6ZUT4 128 aa3.28□□□□□ -1.88
HERC1-208ENST00000560462 CDC42SE2Q9NRR3 84 aa3.28□□□□□ -1.88
HERC1-208ENST00000560462 BCE1O60756 84 aa3.27□□□□□ -1.89
HERC1-208ENST00000560462 SPRR2DP22532 72 aa3.27□□□□□ -1.89
HERC1-208ENST00000560462 DSCR10P59022 87 aa3.27□□□□□ -1.89
HERC1-208ENST00000560462 PCP2Q8IVA1 136 aa3.27□□□□□ -1.89
HERC1-208ENST00000560462 NAT8BQ9UHF3 227 aa3.27□□□□□ -1.89
HERC1-208ENST00000560462 CBY1Q9Y3M2 126 aa3.27□□□□□ -1.89
HERC1-208ENST00000560462 TRAV13-1A0A0B4J241 112 aa3.26□□□□□ -1.89
HERC1-208ENST00000560462 SMIM27A0A1W2PRY6 76 aa3.26□□□□□ -1.89
HERC1-208ENST00000560462 C1orf196B1AJZ1 125 aa3.26□□□□□ -1.89
HERC1-208ENST00000560462 COX7A2LO14548 114 aa3.26□□□□□ -1.89
HERC1-208ENST00000560462 PPP1R17O96001 155 aa3.26□□□□□ -1.89
HERC1-208ENST00000560462 PSMB2P49721 201 aa3.26□□□□□ -1.89
HERC1-208ENST00000560462 SMAGPQ0VAQ4 97 aa3.26□□□□□ -1.89
HERC1-208ENST00000560462 TMEM241Q24JQ0 296 aa3.26□□□□□ -1.89
HERC1-208ENST00000560462 MRPL51Q4U2R6 128 aaKnown RBP3.26□□□□□ -1.89
HERC1-208ENST00000560462 C6orf99Q4VX62 202 aa3.26□□□□□ -1.89
HERC1-208ENST00000560462 FAM104BQ5XKR9 115 aa3.26□□□□□ -1.89
HERC1-208ENST00000560462 NAT8Q9UHE5 227 aa3.26□□□□□ -1.89
HERC1-208ENST00000560462 LINC00862A6NCI5 91 aa3.25□□□□□ -1.89
HERC1-208ENST00000560462 A6NN06 94 aa3.25□□□□□ -1.89
HERC1-208ENST00000560462 C9JQL5 133 aa3.25□□□□□ -1.89
HERC1-208ENST00000560462 D6R8Y8 96 aa3.25□□□□□ -1.89
HERC1-208ENST00000560462 NDUFS5O43920 106 aa3.25□□□□□ -1.89
HERC1-208ENST00000560462 CKS2P33552 79 aa3.25□□□□□ -1.89
HERC1-208ENST00000560462 RPL39P62891 51 aaKnown RBP3.25□□□□□ -1.89
HERC1-208ENST00000560462 HBBP68871 147 aa3.25□□□□□ -1.89
HERC1-208ENST00000560462 SPAG11BQ08648 103 aa3.25□□□□□ -1.89
HERC1-208ENST00000560462 MRPL54Q6P161 138 aaKnown RBP3.25□□□□□ -1.89
HERC1-208ENST00000560462 C5orf38Q86SI9 138 aa3.25□□□□□ -1.89
HERC1-208ENST00000560462 IMMP2LQ96T52 175 aa3.25□□□□□ -1.89
HERC1-208ENST00000560462 SMIM2Q9BVW6 85 aa3.25□□□□□ -1.89
HERC1-208ENST00000560462 TRBV24-1A0A075B6N3 115 aa3.24□□□□□ -1.89
HERC1-208ENST00000560462 A0A1B0GVX0 72 aa3.24□□□□□ -1.89
HERC1-208ENST00000560462 A0A1B0GXF2 115 aa3.24□□□□□ -1.89
HERC1-208ENST00000560462 C9orf92A6NGG3 77 aa3.24□□□□□ -1.89
HERC1-208ENST00000560462 SLC25A20O43772 301 aa3.24□□□□□ -1.89
HERC1-208ENST00000560462 NPYP01303 97 aa3.24□□□□□ -1.89
HERC1-208ENST00000560462 OR10D4PQ8NGN7 298 aa3.24□□□□□ -1.89
HERC1-208ENST00000560462 ORAOV1Q8WV07 137 aa3.24□□□□□ -1.89
HERC1-208ENST00000560462 C20orf78Q9BR46 151 aa3.24□□□□□ -1.89
HERC1-208ENST00000560462 TIMM21Q9BVV7 248 aa3.24□□□□□ -1.89
HERC1-208ENST00000560462 RPS10P5Q9NQ39 176 aa3.24□□□□□ -1.89
HERC1-208ENST00000560462 IGHV6-1A0A0B4J1U7 121 aa3.23□□□□□ -1.89
HERC1-208ENST00000560462 F8W036 122 aa3.23□□□□□ -1.89
HERC1-208ENST00000560462 S100A8P05109 93 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms