RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 TYMSOSQ8TAI1 123 aa8.39□□□□□ -1.07
TPM1-223ENST00000560445 IGKV2-28A0A075B6P5 120 aa8.38□□□□□ -1.07
TPM1-223ENST00000560445 IGKV2D-28P01615 120 aa8.38□□□□□ -1.07
TPM1-223ENST00000560445 ZNF625Q96I27 306 aaPredicted RBP8.38□□□□□ -1.07
TPM1-223ENST00000560445 VPREB1P12018 145 aa8.37□□□□□ -1.07
TPM1-223ENST00000560445 PRR4Q16378 134 aa8.37□□□□□ -1.07
TPM1-223ENST00000560445 TRGC2P03986 189 aa8.36□□□□□ -1.07
TPM1-223ENST00000560445 LINC00158P58513 81 aa8.36□□□□□ -1.07
TPM1-223ENST00000560445 HERV-K104P63124 156 aa8.36□□□□□ -1.07
TPM1-223ENST00000560445 CTAG1AP78358 180 aa8.36□□□□□ -1.07
TPM1-223ENST00000560445 S100A12P80511 92 aa8.36□□□□□ -1.07
TPM1-223ENST00000560445 TMEM223A0PJW6 202 aa8.35□□□□□ -1.07
TPM1-223ENST00000560445 FAM19A1Q7Z5A9 133 aa8.35□□□□□ -1.07
TPM1-223ENST00000560445 KRTAP13-1Q8IUC0 172 aa8.35□□□□□ -1.07
TPM1-223ENST00000560445 FAM19A2Q8N3H0 131 aa8.35□□□□□ -1.07
TPM1-223ENST00000560445 MAP1LC3CQ9BXW4 147 aa8.35□□□□□ -1.07
TPM1-223ENST00000560445 TMEM126AQ9H061 195 aa8.35□□□□□ -1.07
TPM1-223ENST00000560445 IGKV2D-26A0A0A0MRZ7 120 aa8.34□□□□□ -1.07
TPM1-223ENST00000560445 LEPROTL1O95214 131 aa8.34□□□□□ -1.07
TPM1-223ENST00000560445 H0Y8G0 127 aa8.33□□□□□ -1.08
TPM1-223ENST00000560445 MEIG1Q5JSS6 88 aa8.33□□□□□ -1.08
TPM1-223ENST00000560445 SLC7A5P1Q8MH63 180 aa8.33□□□□□ -1.08
TPM1-223ENST00000560445 HSPB8Q9UJY1 196 aa8.33□□□□□ -1.08
TPM1-223ENST00000560445 ZNF706Q9Y5V0 76 aaPredicted RBP8.33□□□□□ -1.08
TPM1-223ENST00000560445 A0A087X002 238 aa8.32□□□□□ -1.08
TPM1-223ENST00000560445 M0R378 163 aa8.32□□□□□ -1.08
TPM1-223ENST00000560445 C4orf48Q5BLP8 95 aa8.32□□□□□ -1.08
TPM1-223ENST00000560445 MYMXA0A1B0GTQ4 84 aa8.31□□□□□ -1.08
TPM1-223ENST00000560445 SERF1AO75920 110 aa8.31□□□□□ -1.08
TPM1-223ENST00000560445 PLNP26678 52 aa8.31□□□□□ -1.08
TPM1-223ENST00000560445 PRLHP81277 87 aa8.31□□□□□ -1.08
TPM1-223ENST00000560445 A0A0U1RRA0 63 aa8.3□□□□□ -1.08
TPM1-223ENST00000560445 TSPAN13O95857 204 aa8.3□□□□□ -1.08
TPM1-223ENST00000560445 LINC00304Q8N9R0 145 aa8.3□□□□□ -1.08
TPM1-223ENST00000560445 TMEM238C9JI98 176 aa8.29□□□□□ -1.08
TPM1-223ENST00000560445 PRYO14603 147 aa8.29□□□□□ -1.08
TPM1-223ENST00000560445 SCO1O75880 301 aa8.29□□□□□ -1.08
TPM1-223ENST00000560445 HERVK_113P61574 105 aa8.29□□□□□ -1.08
TPM1-223ENST00000560445 RNF213Q63HN8 5207 aa8.28□□□□□ -1.08
TPM1-223ENST00000560445 SMIM13P0DJ93 91 aa8.28□□□□□ -1.08
TPM1-223ENST00000560445 FABP4P15090 132 aa8.28□□□□□ -1.08
TPM1-223ENST00000560445 BOD1L2Q8IYS8 172 aa8.28□□□□□ -1.08
TPM1-223ENST00000560445 PLEKHB2Q96CS7 222 aa8.28□□□□□ -1.08
TPM1-223ENST00000560445 HIGD2AQ9BW72 106 aa8.28□□□□□ -1.08
TPM1-223ENST00000560445 NDUFA12Q9UI09 145 aa8.28□□□□□ -1.08
TPM1-223ENST00000560445 A0A0U1RQV1 116 aa8.27□□□□□ -1.09
TPM1-223ENST00000560445 COLCA2A8K830 154 aa8.27□□□□□ -1.09
TPM1-223ENST00000560445 LEPROTO15243 131 aa8.26□□□□□ -1.09
TPM1-223ENST00000560445 DPM2O94777 84 aa8.26□□□□□ -1.09
TPM1-223ENST00000560445 NMUP48645 174 aa8.26□□□□□ -1.09
TPM1-223ENST00000560445 SPAG11AQ6PDA7 123 aa8.26□□□□□ -1.09
TPM1-223ENST00000560445 MIR7-3HGQ8N6C7 128 aa8.26□□□□□ -1.09
TPM1-223ENST00000560445 MIEN1Q9BRT3 115 aa8.26□□□□□ -1.09
TPM1-223ENST00000560445 LINC00337Q8N6G1 96 aa8.25□□□□□ -1.09
TPM1-223ENST00000560445 ETDCA0A1B0GVM5 59 aa8.24□□□□□ -1.09
TPM1-223ENST00000560445 IGKCP01834 107 aa8.24□□□□□ -1.09
TPM1-223ENST00000560445 KRTAP13-2Q52LG2 175 aa8.24□□□□□ -1.09
TPM1-223ENST00000560445 ANAPC11Q9NYG5 84 aa8.24□□□□□ -1.09
TPM1-223ENST00000560445 LGALS3P17931 250 aaKnown RBP8.23□□□□□ -1.09
TPM1-223ENST00000560445 LINC00310P59036 64 aa8.23□□□□□ -1.09
TPM1-223ENST00000560445 KCNQ1DNQ9H478 68 aa8.23□□□□□ -1.09
TPM1-223ENST00000560445 CBY1Q9Y3M2 126 aa8.23□□□□□ -1.09
TPM1-223ENST00000560445 J3QQQ9 107 aa8.22□□□□□ -1.09
TPM1-223ENST00000560445 Q8NDZ9 215 aa8.22□□□□□ -1.09
TPM1-223ENST00000560445 TRBV10-2A0A0K0K1G8 114 aa8.21□□□□□ -1.1
TPM1-223ENST00000560445 NCR3O14931 201 aa8.21□□□□□ -1.1
TPM1-223ENST00000560445 SPRR4Q96PI1 79 aa8.21□□□□□ -1.1
TPM1-223ENST00000560445 SPRR1AP35321 89 aa8.2□□□□□ -1.1
TPM1-223ENST00000560445 SPANXB1Q9NS25 103 aaPredicted RBP8.2□□□□□ -1.1
TPM1-223ENST00000560445 LOC107984156A0A0G2JMH3 177 aa8.19□□□□□ -1.1
TPM1-223ENST00000560445 ARL17AQ8IVW1 177 aa8.19□□□□□ -1.1
TPM1-223ENST00000560445 PMCHL2Q9BQD1 86 aa8.19□□□□□ -1.1
TPM1-223ENST00000560445 TRBV10-3A0A0K0K1G6 114 aa8.18□□□□□ -1.1
TPM1-223ENST00000560445 NDUFC2O95298 119 aa8.17□□□□□ -1.1
TPM1-223ENST00000560445 DDTP30046 118 aa8.17□□□□□ -1.1
TPM1-223ENST00000560445 TSPEAR-AS2P59090 65 aa8.17□□□□□ -1.1
TPM1-223ENST00000560445 JOSD1Q15040 202 aaPredicted RBP8.17□□□□□ -1.1
TPM1-223ENST00000560445 TPRXLQ17RH7 258 aa8.17□□□□□ -1.1
TPM1-223ENST00000560445 S100A7L2Q5SY68 101 aa8.17□□□□□ -1.1
TPM1-223ENST00000560445 LPAP08519 4548 aa8.17□□□□□ -1.1
TPM1-223ENST00000560445 HIST1H2BKO60814 126 aa8.16□□□□□ -1.1
TPM1-223ENST00000560445 HIST1H2BJP06899 126 aa8.16□□□□□ -1.1
TPM1-223ENST00000560445 HIST1H2BOP23527 126 aa8.16□□□□□ -1.1
TPM1-223ENST00000560445 HIST1H2BBP33778 126 aa8.16□□□□□ -1.1
TPM1-223ENST00000560445 HIST1H2BDP58876 126 aa8.16□□□□□ -1.1
TPM1-223ENST00000560445 HIST1H2BCP62807 126 aa8.16□□□□□ -1.1
TPM1-223ENST00000560445 HIST2H2BEQ16778 126 aa8.16□□□□□ -1.1
TPM1-223ENST00000560445 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.16□□□□□ -1.1
TPM1-223ENST00000560445 FP248Q71RG6 208 aaPredicted RBP8.16□□□□□ -1.1
TPM1-223ENST00000560445 HIST1H2BHQ93079 126 aa8.16□□□□□ -1.1
TPM1-223ENST00000560445 HIST1H2BNQ99877 126 aa8.16□□□□□ -1.1
TPM1-223ENST00000560445 HIST1H2BMQ99879 126 aa8.16□□□□□ -1.1
TPM1-223ENST00000560445 CDIP1Q9H305 208 aa8.16□□□□□ -1.1
TPM1-223ENST00000560445 IGLV7-46A0A075B6I9 117 aa8.15□□□□□ -1.1
TPM1-223ENST00000560445 E9PLD3 99 aa8.15□□□□□ -1.1
TPM1-223ENST00000560445 SYS1-DBNDD2H3BUS1 97 aa8.15□□□□□ -1.1
TPM1-223ENST00000560445 DAND5Q8N907 189 aa8.15□□□□□ -1.1
TPM1-223ENST00000560445 SMCR5Q8TEV8 140 aa8.15□□□□□ -1.1
TPM1-223ENST00000560445 KRTAP4-16G5E9R7 235 aaPredicted RBP8.14□□□□□ -1.11
TPM1-223ENST00000560445 HINT1P49773 126 aaPredicted RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms