RNA–Protein interactions for RNA: ENST00000560208.1

CRNDE-209, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 735 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-209ENST00000560208 TSPEAR-AS2P59090 65 aa14.28□□□□□ -0.12
CRNDE-209ENST00000560208 LINC01545Q5VT33 79 aa14.28□□□□□ -0.12
CRNDE-209ENST00000560208 PLEKHB2Q96CS7 222 aa14.28□□□□□ -0.12
CRNDE-209ENST00000560208 S100A6P06703 90 aa14.27□□□□□ -0.13
CRNDE-209ENST00000560208 NDUFA12Q9UI09 145 aa14.27□□□□□ -0.13
CRNDE-209ENST00000560208 UBR4Q5T4S7 5183 aa14.26□□□□□ -0.13
CRNDE-209ENST00000560208 LINC00158P58513 81 aa14.26□□□□□ -0.13
CRNDE-209ENST00000560208 S100A2P29034 98 aa14.25□□□□□ -0.13
CRNDE-209ENST00000560208 KRTAP10-8P60410 259 aa14.25□□□□□ -0.13
CRNDE-209ENST00000560208 MEIG1Q5JSS6 88 aa14.25□□□□□ -0.13
CRNDE-209ENST00000560208 HIST3H2BBQ8N257 126 aa14.25□□□□□ -0.13
CRNDE-209ENST00000560208 MYMXA0A1B0GTQ4 84 aa14.24□□□□□ -0.13
CRNDE-209ENST00000560208 J3QQQ9 107 aa14.24□□□□□ -0.13
CRNDE-209ENST00000560208 LGALS3P17931 250 aaKnown RBP14.24□□□□□ -0.13
CRNDE-209ENST00000560208 UBE2BP63146 152 aa14.24□□□□□ -0.13
CRNDE-209ENST00000560208 COX17Q14061 63 aa14.24□□□□□ -0.13
CRNDE-209ENST00000560208 C1orf137Q5JT78 98 aa14.24□□□□□ -0.13
CRNDE-209ENST00000560208 C22orf24Q9Y442 160 aa14.23□□□□□ -0.13
CRNDE-209ENST00000560208 C20orf202A1L168 122 aa14.22□□□□□ -0.13
CRNDE-209ENST00000560208 SMIM13P0DJ93 91 aa14.22□□□□□ -0.13
CRNDE-209ENST00000560208 HERV-K104P63124 156 aa14.22□□□□□ -0.13
CRNDE-209ENST00000560208 SND1-IT1Q9HBX3 110 aa14.22□□□□□ -0.13
CRNDE-209ENST00000560208 KRTAP11-1Q8IUC1 163 aa14.21□□□□□ -0.13
CRNDE-209ENST00000560208 HIST1H2BLQ99880 126 aa14.2□□□□□ -0.14
CRNDE-209ENST00000560208 E9PLD3 99 aa14.19□□□□□ -0.14
CRNDE-209ENST00000560208 SNRPEP62304 92 aaKnown RBP14.18□□□□□ -0.14
CRNDE-209ENST00000560208 LBHQ53QV2 105 aaPredicted RBP14.17□□□□□ -0.14
CRNDE-209ENST00000560208 NKAPP1Q8N9T2 125 aa14.17□□□□□ -0.14
CRNDE-209ENST00000560208 GAGE10A6NGK3 116 aa14.16□□□□□ -0.14
CRNDE-209ENST00000560208 IGLV7-43P04211 117 aa14.16□□□□□ -0.14
CRNDE-209ENST00000560208 NMUP48645 174 aa14.16□□□□□ -0.14
CRNDE-209ENST00000560208 MRPL55Q7Z7F7 128 aaKnown RBP14.16□□□□□ -0.14
CRNDE-209ENST00000560208 ATOH7Q8N100 152 aa14.16□□□□□ -0.14
CRNDE-209ENST00000560208 LINC00587B1AMM8 73 aa14.15□□□□□ -0.14
CRNDE-209ENST00000560208 MIR7-3HGQ8N6C7 128 aa14.15□□□□□ -0.14
CRNDE-209ENST00000560208 TP73-AS1Q9UF72 201 aa14.14□□□□□ -0.15
CRNDE-209ENST00000560208 DIRC1Q969H9 104 aa14.13□□□□□ -0.15
CRNDE-209ENST00000560208 LINC00167Q96N53 147 aa14.12□□□□□ -0.15
CRNDE-209ENST00000560208 IGLV5-37A0A075B6J1 123 aa14.11□□□□□ -0.15
CRNDE-209ENST00000560208 IGKV2D-26A0A0A0MRZ7 120 aa14.11□□□□□ -0.15
CRNDE-209ENST00000560208 RPL37AP8A6NKH3 93 aa14.11□□□□□ -0.15
CRNDE-209ENST00000560208 VPREB1P12018 145 aa14.11□□□□□ -0.15
CRNDE-209ENST00000560208 RPL24P83731 157 aaKnown RBP14.11□□□□□ -0.15
CRNDE-209ENST00000560208 DAND5Q8N907 189 aa14.11□□□□□ -0.15
CRNDE-209ENST00000560208 LRP2P98164 4655 aa14.11□□□□□ -0.15
CRNDE-209ENST00000560208 Q8NDZ9 215 aa14.1□□□□□ -0.15
CRNDE-209ENST00000560208 C5orf52A6NGY3 159 aa14.09□□□□□ -0.15
CRNDE-209ENST00000560208 A0A0J9YXY3 114 aa14.08□□□□□ -0.16
CRNDE-209ENST00000560208 TTTY13Q9BZ97 58 aa14.08□□□□□ -0.16
CRNDE-209ENST00000560208 H0Y9J4 135 aa14.07□□□□□ -0.16
CRNDE-209ENST00000560208 ANKRD39Q53RE8 183 aa14.07□□□□□ -0.16
CRNDE-209ENST00000560208 BOD1L2Q8IYS8 172 aa14.07□□□□□ -0.16
CRNDE-209ENST00000560208 ZNF815PA8K554 130 aa14.06□□□□□ -0.16
CRNDE-209ENST00000560208 AKR1D1P51857 326 aa14.06□□□□□ -0.16
CRNDE-209ENST00000560208 IGKV2-28A0A075B6P5 120 aa14.05□□□□□ -0.16
CRNDE-209ENST00000560208 IGKV2D-28P01615 120 aa14.05□□□□□ -0.16
CRNDE-209ENST00000560208 NPC2P61916 151 aa14.03□□□□□ -0.16
CRNDE-209ENST00000560208 PRR26Q8N8Z3 221 aa14.03□□□□□ -0.16
CRNDE-209ENST00000560208 NCR3O14931 201 aa14.02□□□□□ -0.17
CRNDE-209ENST00000560208 ADAMTSL4-AS1Q5T5F5 129 aa14.01□□□□□ -0.17
CRNDE-209ENST00000560208 MIEN1Q9BRT3 115 aa14.01□□□□□ -0.17
CRNDE-209ENST00000560208 SCGB1D1O95968 90 aa14□□□□□ -0.17
CRNDE-209ENST00000560208 M0R378 163 aa13.99□□□□□ -0.17
CRNDE-209ENST00000560208 IGLV1-50A0A075B6I6 118 aa13.98□□□□□ -0.17
CRNDE-209ENST00000560208 HSBP1L1C9JCN9 74 aa13.97□□□□□ -0.17
CRNDE-209ENST00000560208 BCE1O60756 84 aa13.97□□□□□ -0.17
CRNDE-209ENST00000560208 TMA7Q9Y2S6 64 aaKnown RBP13.97□□□□□ -0.17
CRNDE-209ENST00000560208 KRTAP1-4P0C5Y4 121 aa13.96□□□□□ -0.17
CRNDE-209ENST00000560208 SCGB1D4Q6XE38 83 aa13.96□□□□□ -0.17
CRNDE-209ENST00000560208 PCP2Q8IVA1 136 aa13.96□□□□□ -0.17
CRNDE-209ENST00000560208 TMEM238C9JI98 176 aa13.95□□□□□ -0.18
CRNDE-209ENST00000560208 SOSTDC1Q6X4U4 206 aa13.95□□□□□ -0.18
CRNDE-209ENST00000560208 LITAFQ99732 161 aa13.95□□□□□ -0.18
CRNDE-209ENST00000560208 LOC107984156A0A0G2JMH3 177 aa13.94□□□□□ -0.18
CRNDE-209ENST00000560208 ZNF861PO60384 105 aa13.94□□□□□ -0.18
CRNDE-209ENST00000560208 TIMM17BO60830 172 aa13.94□□□□□ -0.18
CRNDE-209ENST00000560208 ARL17AQ8IVW1 177 aa13.94□□□□□ -0.18
CRNDE-209ENST00000560208 EIF4EBP3O60516 100 aaPredicted RBP13.93□□□□□ -0.18
CRNDE-209ENST00000560208 UBE2AP49459 152 aa13.92□□□□□ -0.18
CRNDE-209ENST00000560208 TMEM126AQ9H061 195 aa13.92□□□□□ -0.18
CRNDE-209ENST00000560208 LINC00308Q8TCZ7 52 aa13.91□□□□□ -0.18
CRNDE-209ENST00000560208 RPL28P46779 137 aaKnown RBP13.9□□□□□ -0.18
CRNDE-209ENST00000560208 FAM19A1Q7Z5A9 133 aa13.9□□□□□ -0.18
CRNDE-209ENST00000560208 SPANXB1Q9NS25 103 aaPredicted RBP13.89□□□□□ -0.19
CRNDE-209ENST00000560208 TRBV10-3A0A0K0K1G6 114 aa13.88□□□□□ -0.19
CRNDE-209ENST00000560208 NDUFC2O95298 119 aa13.87□□□□□ -0.19
CRNDE-209ENST00000560208 PRLHP81277 87 aa13.87□□□□□ -0.19
CRNDE-209ENST00000560208 TRBV10-2A0A0K0K1G8 114 aa13.86□□□□□ -0.19
CRNDE-209ENST00000560208 RPL13AP40429 203 aaKnown RBP13.86□□□□□ -0.19
CRNDE-209ENST00000560208 DDTP30046 118 aa13.85□□□□□ -0.19
CRNDE-209ENST00000560208 S100A7L2Q5SY68 101 aa13.85□□□□□ -0.19
CRNDE-209ENST00000560208 PRYO14603 147 aa13.84□□□□□ -0.19
CRNDE-209ENST00000560208 SPANXDQ9BXN6 97 aa13.84□□□□□ -0.19
CRNDE-209ENST00000560208 SPANXCQ9NY87 97 aa13.84□□□□□ -0.19
CRNDE-209ENST00000560208 RNF213Q63HN8 5207 aa13.82□□□□□ -0.2
CRNDE-209ENST00000560208 S100A12P80511 92 aa13.82□□□□□ -0.2
CRNDE-209ENST00000560208 KRTAP13-1Q8IUC0 172 aa13.82□□□□□ -0.2
CRNDE-209ENST00000560208 KCNQ1DNQ9H478 68 aa13.81□□□□□ -0.2
CRNDE-209ENST00000560208 LPAP08519 4548 aa13.8□□□□□ -0.2
CRNDE-209ENST00000560208 JOSD1Q15040 202 aaPredicted RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 395.1 ms