RNA–Protein interactions for RNA: ENST00000560051.1

HMGB3P26-201, Transcript of high mobility group box 3 pseudogene 26, humanhuman

BASIC

Gene HMGB3P26, Length 582 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P26-201ENST00000560051 IGKV4-1P06312 121 aa2.63□□□□□ -1.99
HMGB3P26-201ENST00000560051 RPL37AP61513 92 aaKnown RBP2.63□□□□□ -1.99
HMGB3P26-201ENST00000560051 ZFHX2Q9C0A1 2572 aaPredicted RBP2.62□□□□□ -1.99
HMGB3P26-201ENST00000560051 SSC5DA1L4H1 1573 aa2.62□□□□□ -1.99
HMGB3P26-201ENST00000560051 SHANK1Q9Y566 2161 aa2.62□□□□□ -1.99
HMGB3P26-201ENST00000560051 A0A0G2JQZ4 141 aa2.62□□□□□ -1.99
HMGB3P26-201ENST00000560051 NDUFA1O15239 70 aa2.62□□□□□ -1.99
HMGB3P26-201ENST00000560051 LINC00308Q8TCZ7 52 aa2.62□□□□□ -1.99
HMGB3P26-201ENST00000560051 LINC00472Q9H8W2 130 aa2.62□□□□□ -1.99
HMGB3P26-201ENST00000560051 TNRC6CQ9HCJ0 1690 aaKnown RBP2.62□□□□□ -1.99
HMGB3P26-201ENST00000560051 COL4A5P29400 1685 aa2.61□□□□□ -1.99
HMGB3P26-201ENST00000560051 KRTAP24-1Q3LI83 254 aa2.61□□□□□ -1.99
HMGB3P26-201ENST00000560051 C5orf56Q8N8D9 126 aa2.61□□□□□ -1.99
HMGB3P26-201ENST00000560051 ANAPC11Q9NYG5 84 aa2.61□□□□□ -1.99
HMGB3P26-201ENST00000560051 CCL26Q9Y258 94 aa2.61□□□□□ -1.99
HMGB3P26-201ENST00000560051 ANKRD17O75179 2603 aaKnown RBP2.6□□□□□ -1.99
HMGB3P26-201ENST00000560051 LOC730098B7Z3J9 87 aa2.6□□□□□ -1.99
HMGB3P26-201ENST00000560051 F5P12259 2224 aa2.59□□□□□ -1.99
HMGB3P26-201ENST00000560051 IGLV4-60A0A075B6I1 120 aa2.59□□□□□ -1.99
HMGB3P26-201ENST00000560051 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.59□□□□□ -1.99
HMGB3P26-201ENST00000560051 IGKV2-29A2NJV5 120 aaPredicted RBP2.59□□□□□ -1.99
HMGB3P26-201ENST00000560051 C10orf55Q5SWW7 151 aa2.59□□□□□ -1.99
HMGB3P26-201ENST00000560051 Q96NJ1 140 aa2.59□□□□□ -1.99
HMGB3P26-201ENST00000560051 CADP27708 2225 aa2.58□□□□□ -2
HMGB3P26-201ENST00000560051 ACYP2P14621 99 aa2.58□□□□□ -2
HMGB3P26-201ENST00000560051 INE1O15225 51 aa2.57□□□□□ -2
HMGB3P26-201ENST00000560051 KRTAP10-12P60413 245 aa2.57□□□□□ -2
HMGB3P26-201ENST00000560051 SPINK14Q6IE38 97 aa2.57□□□□□ -2
HMGB3P26-201ENST00000560051 URB1O60287 2271 aaKnown RBP2.57□□□□□ -2
HMGB3P26-201ENST00000560051 M0R2N4 97 aa2.56□□□□□ -2
HMGB3P26-201ENST00000560051 IGLV6-57P01721 117 aa2.56□□□□□ -2
HMGB3P26-201ENST00000560051 LINC00158P58513 81 aa2.56□□□□□ -2
HMGB3P26-201ENST00000560051 Q6ZQY7 126 aa2.56□□□□□ -2
HMGB3P26-201ENST00000560051 OBSCNQ5VST9 7968 aa2.56□□□□□ -2
HMGB3P26-201ENST00000560051 SORL1Q92673 2214 aa2.56□□□□□ -2
HMGB3P26-201ENST00000560051 LINC00612Q8N6U2 182 aa2.55□□□□□ -2
HMGB3P26-201ENST00000560051 TTTY10Q9BZA0 68 aa2.55□□□□□ -2
HMGB3P26-201ENST00000560051 BPTFQ12830 3046 aa2.55□□□□□ -2
HMGB3P26-201ENST00000560051 AHCTF1Q8WYP5 2266 aa2.54□□□□□ -2
HMGB3P26-201ENST00000560051 LY6G6CO95867 125 aa2.54□□□□□ -2
HMGB3P26-201ENST00000560051 HRES1P13985 223 aa2.54□□□□□ -2
HMGB3P26-201ENST00000560051 DEFB134Q4QY38 66 aa2.54□□□□□ -2
HMGB3P26-201ENST00000560051 KRTAP7-1Q8IUC3 87 aa2.54□□□□□ -2
HMGB3P26-201ENST00000560051 SMIM11BQ8TCY0 68 aa2.54□□□□□ -2
HMGB3P26-201ENST00000560051 C14orf177Q52M58 125 aa2.53□□□□□ -2
HMGB3P26-201ENST00000560051 Q8IZM0 81 aa2.53□□□□□ -2
HMGB3P26-201ENST00000560051 ATRXP46100 2492 aa2.52□□□□□ -2.01
HMGB3P26-201ENST00000560051 SPTY2D1-AS1A0A0U1RR47 76 aa2.52□□□□□ -2.01
HMGB3P26-201ENST00000560051 ANGP03950 147 aaKnown RBP2.52□□□□□ -2.01
HMGB3P26-201ENST00000560051 KRTAP11-1Q8IUC1 163 aa2.52□□□□□ -2.01
HMGB3P26-201ENST00000560051 CCL19Q99731 98 aa2.52□□□□□ -2.01
HMGB3P26-201ENST00000560051 CNOT1A5YKK6 2376 aaKnown RBP2.52□□□□□ -2.01
HMGB3P26-201ENST00000560051 KNL1Q8NG31 2342 aa2.52□□□□□ -2.01
HMGB3P26-201ENST00000560051 H3BRN7 92 aa2.51□□□□□ -2.01
HMGB3P26-201ENST00000560051 CRIP1P50238 77 aa2.51□□□□□ -2.01
HMGB3P26-201ENST00000560051 POLR2KP53803 58 aaKnown RBP2.51□□□□□ -2.01
HMGB3P26-201ENST00000560051 TPRXLQ17RH7 258 aa2.51□□□□□ -2.01
HMGB3P26-201ENST00000560051 C10orf99Q6UWK7 81 aa2.51□□□□□ -2.01
HMGB3P26-201ENST00000560051 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.51□□□□□ -2.01
HMGB3P26-201ENST00000560051 TP53AIP1Q9HCN2 124 aa2.51□□□□□ -2.01
HMGB3P26-201ENST00000560051 COL4A2P08572 1712 aa2.51□□□□□ -2.01
HMGB3P26-201ENST00000560051 IGKV2D-24A0A075B6R9 120 aa2.5□□□□□ -2.01
HMGB3P26-201ENST00000560051 Q8N9L7 120 aa2.5□□□□□ -2.01
HMGB3P26-201ENST00000560051 LINC00304Q8N9R0 145 aa2.5□□□□□ -2.01
HMGB3P26-201ENST00000560051 ABCA1O95477 2261 aa2.5□□□□□ -2.01
HMGB3P26-201ENST00000560051 COL4A4P53420 1690 aaPredicted RBP2.5□□□□□ -2.01
HMGB3P26-201ENST00000560051 LYNX1G3V0Z9 82 aa2.49□□□□□ -2.01
HMGB3P26-201ENST00000560051 SPACA4Q8TDM5 124 aa2.49□□□□□ -2.01
HMGB3P26-201ENST00000560051 PTPRQQ9UMZ3 2332 aa2.48□□□□□ -2.01
HMGB3P26-201ENST00000560051 LINC00315P59091 139 aa2.48□□□□□ -2.01
HMGB3P26-201ENST00000560051 LINC00575Q6W349 94 aa2.48□□□□□ -2.01
HMGB3P26-201ENST00000560051 SSBP3-AS1Q7Z2R9 100 aa2.48□□□□□ -2.01
HMGB3P26-201ENST00000560051 PLAC4Q8WY50 150 aa2.48□□□□□ -2.01
HMGB3P26-201ENST00000560051 CDKN2A-AS1Q9UH64 79 aa2.48□□□□□ -2.01
HMGB3P26-201ENST00000560051 COX6B2Q6YFQ2 88 aa2.47□□□□□ -2.01
HMGB3P26-201ENST00000560051 Q6ZRX8 168 aa2.47□□□□□ -2.01
HMGB3P26-201ENST00000560051 MAPK1IP1LQ8NDC0 245 aa2.47□□□□□ -2.01
HMGB3P26-201ENST00000560051 FN1P02751 2386 aaKnown RBP2.47□□□□□ -2.01
HMGB3P26-201ENST00000560051 PRCDQ00LT1 54 aa2.46□□□□□ -2.02
HMGB3P26-201ENST00000560051 LCE1FQ5T754 118 aa2.46□□□□□ -2.02
HMGB3P26-201ENST00000560051 TECTAO75443 2155 aa2.46□□□□□ -2.02
HMGB3P26-201ENST00000560051 IGKV2-28A0A075B6P5 120 aa2.45□□□□□ -2.02
HMGB3P26-201ENST00000560051 A0A1B0GVY2 172 aa2.45□□□□□ -2.02
HMGB3P26-201ENST00000560051 IGKV2D-28P01615 120 aa2.45□□□□□ -2.02
HMGB3P26-201ENST00000560051 KRTAP10-3P60369 221 aa2.45□□□□□ -2.02
HMGB3P26-201ENST00000560051 PLCE1Q9P212 2302 aa2.45□□□□□ -2.02
HMGB3P26-201ENST00000560051 USF3Q68DE3 2245 aa2.44□□□□□ -2.02
HMGB3P26-201ENST00000560051 ASXL3Q9C0F0 2248 aa2.44□□□□□ -2.02
HMGB3P26-201ENST00000560051 CACNA1EQ15878 2313 aa2.44□□□□□ -2.02
HMGB3P26-201ENST00000560051 CNTRLQ7Z7A1 2325 aa2.44□□□□□ -2.02
HMGB3P26-201ENST00000560051 A0A096LNT2 108 aa2.44□□□□□ -2.02
HMGB3P26-201ENST00000560051 TRIOBPQ9H2D6 2365 aa2.43□□□□□ -2.02
HMGB3P26-201ENST00000560051 H3BSH0 61 aa2.43□□□□□ -2.02
HMGB3P26-201ENST00000560051 PRB2P02812 416 aaPredicted RBP2.43□□□□□ -2.02
HMGB3P26-201ENST00000560051 SPINK13Q1W4C9 94 aa2.43□□□□□ -2.02
HMGB3P26-201ENST00000560051 ASCC3Q8N3C0 2202 aaKnown RBP2.42□□□□□ -2.02
HMGB3P26-201ENST00000560051 GVQW2A0A096LPI5 108 aaPredicted RBP2.42□□□□□ -2.02
HMGB3P26-201ENST00000560051 G3V318 75 aa2.42□□□□□ -2.02
HMGB3P26-201ENST00000560051 KRTAP4-3Q9BYR4 195 aa2.42□□□□□ -2.02
HMGB3P26-201ENST00000560051 CRIPTQ9P021 101 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms