RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 LRP1BQ9NZR2 4599 aa3.37□□□□□ -1.87
SPG11-220ENST00000559933 A0A0J9YXY3 114 aa3.36□□□□□ -1.87
SPG11-220ENST00000559933 MYMXA0A1B0GTQ4 84 aa3.36□□□□□ -1.87
SPG11-220ENST00000559933 PANO1I0J062 215 aa3.36□□□□□ -1.87
SPG11-220ENST00000559933 CHTF8P0CG12 524 aa3.36□□□□□ -1.87
SPG11-220ENST00000559933 SMIM13P0DJ93 91 aa3.36□□□□□ -1.87
SPG11-220ENST00000559933 COX8AP10176 69 aa3.36□□□□□ -1.87
SPG11-220ENST00000559933 CKS1BP61024 79 aa3.36□□□□□ -1.87
SPG11-220ENST00000559933 HAMPP81172 84 aa3.36□□□□□ -1.87
SPG11-220ENST00000559933 SYCNQ0VAF6 134 aa3.36□□□□□ -1.87
SPG11-220ENST00000559933 C2orf91Q6ZV80 131 aa3.36□□□□□ -1.87
SPG11-220ENST00000559933 CARD19Q96LW7 228 aa3.36□□□□□ -1.87
SPG11-220ENST00000559933 DNAH8Q96JB1 4490 aa3.36□□□□□ -1.87
SPG11-220ENST00000559933 S100A12P80511 92 aa3.35□□□□□ -1.87
SPG11-220ENST00000559933 RPL18AQ02543 176 aaKnown RBP3.35□□□□□ -1.87
SPG11-220ENST00000559933 MEIG1Q5JSS6 88 aa3.35□□□□□ -1.87
SPG11-220ENST00000559933 ADAMTSL4-AS1Q5T5F5 129 aa3.35□□□□□ -1.87
SPG11-220ENST00000559933 LCE1AQ5T7P2 110 aa3.35□□□□□ -1.87
SPG11-220ENST00000559933 BOD1L2Q8IYS8 172 aa3.35□□□□□ -1.87
SPG11-220ENST00000559933 Q8NDZ9 215 aa3.35□□□□□ -1.87
SPG11-220ENST00000559933 LITAFQ99732 161 aa3.35□□□□□ -1.87
SPG11-220ENST00000559933 ERG28Q9UKR5 140 aa3.35□□□□□ -1.87
SPG11-220ENST00000559933 APOBP04114 4563 aaKnown RBP3.35□□□□□ -1.87
SPG11-220ENST00000559933 A0A096LNI7 61 aa3.34□□□□□ -1.87
SPG11-220ENST00000559933 IGLV5-52A0A0A0MRZ9 124 aa3.34□□□□□ -1.87
SPG11-220ENST00000559933 IGKV2-24A0A0C4DH68 120 aa3.34□□□□□ -1.87
SPG11-220ENST00000559933 A0A1B0GVY2 172 aa3.34□□□□□ -1.87
SPG11-220ENST00000559933 FAM168BA1KXE4 195 aa3.34□□□□□ -1.87
SPG11-220ENST00000559933 LINC00158P58513 81 aa3.34□□□□□ -1.87
SPG11-220ENST00000559933 CNBPP62633 177 aaKnown RBP3.34□□□□□ -1.87
SPG11-220ENST00000559933 GAGE2EQ4V326 116 aa3.34□□□□□ -1.87
SPG11-220ENST00000559933 SLC25A34Q6PIV7 304 aa3.34□□□□□ -1.87
SPG11-220ENST00000559933 SOSTDC1Q6X4U4 206 aa3.34□□□□□ -1.87
SPG11-220ENST00000559933 SCGB1D4Q6XE38 83 aa3.34□□□□□ -1.87
SPG11-220ENST00000559933 Q6ZRP5 223 aa3.34□□□□□ -1.87
SPG11-220ENST00000559933 MIR7-3HGQ8N6C7 128 aa3.34□□□□□ -1.87
SPG11-220ENST00000559933 C2orf48Q96LS8 159 aa3.34□□□□□ -1.87
SPG11-220ENST00000559933 XAGE1AQ9HD64 81 aa3.34□□□□□ -1.87
SPG11-220ENST00000559933 GAGE2DQ9UEU5 116 aa3.34□□□□□ -1.87
SPG11-220ENST00000559933 CXCL5P42830 114 aa3.33□□□□□ -1.88
SPG11-220ENST00000559933 KRTAP10-1P60331 282 aa3.33□□□□□ -1.88
SPG11-220ENST00000559933 GAGE2BQ13066 116 aa3.33□□□□□ -1.88
SPG11-220ENST00000559933 C14orf177Q52M58 125 aa3.33□□□□□ -1.88
SPG11-220ENST00000559933 C9orf129Q5T035 196 aaKnown RBP3.33□□□□□ -1.88
SPG11-220ENST00000559933 TRBV30A0A0K0K1B3 111 aa3.32□□□□□ -1.88
SPG11-220ENST00000559933 PCP4L1A6NKN8 68 aa3.32□□□□□ -1.88
SPG11-220ENST00000559933 HNRNPA3P51991 378 aaKnown RBP3.32□□□□□ -1.88
SPG11-220ENST00000559933 HERV-K104P63124 156 aa3.32□□□□□ -1.88
SPG11-220ENST00000559933 PRR3P79522 188 aaKnown RBP3.32□□□□□ -1.88
SPG11-220ENST00000559933 SERTAD4-AS1Q5TG53 156 aa3.32□□□□□ -1.88
SPG11-220ENST00000559933 LINC00336Q6ZUF6 198 aa3.32□□□□□ -1.88
SPG11-220ENST00000559933 KRTAP7-1Q8IUC3 87 aa3.32□□□□□ -1.88
SPG11-220ENST00000559933 SND1-IT1Q9HBX3 110 aa3.32□□□□□ -1.88
SPG11-220ENST00000559933 UQCR10Q9UDW1 63 aa3.32□□□□□ -1.88
SPG11-220ENST00000559933 IGKV2D-30A0A075B6S6 120 aa3.31□□□□□ -1.88
SPG11-220ENST00000559933 NDUFC2-KCTD14E9PQ53 114 aa3.31□□□□□ -1.88
SPG11-220ENST00000559933 NCR3O14931 201 aa3.31□□□□□ -1.88
SPG11-220ENST00000559933 DLEU1O43261 78 aa3.31□□□□□ -1.88
SPG11-220ENST00000559933 CTAG1AP78358 180 aa3.31□□□□□ -1.88
SPG11-220ENST00000559933 SDIM1Q6ZPB5 146 aa3.31□□□□□ -1.88
SPG11-220ENST00000559933 FAM19A5Q7Z5A7 132 aaPredicted RBP3.31□□□□□ -1.88
SPG11-220ENST00000559933 MUSTN1Q8IVN3 82 aa3.31□□□□□ -1.88
SPG11-220ENST00000559933 C9orf163Q8N9P6 203 aa3.31□□□□□ -1.88
SPG11-220ENST00000559933 LINC00308Q8TCZ7 52 aa3.31□□□□□ -1.88
SPG11-220ENST00000559933 MIEN1Q9BRT3 115 aa3.31□□□□□ -1.88
SPG11-220ENST00000559933 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.3□□□□□ -1.88
SPG11-220ENST00000559933 LOC107984640A0A0U1RRK4 108 aa3.3□□□□□ -1.88
SPG11-220ENST00000559933 A0A1W2PNN7 141 aa3.3□□□□□ -1.88
SPG11-220ENST00000559933 C16orf90A8MZG2 172 aa3.3□□□□□ -1.88
SPG11-220ENST00000559933 TMEM238C9JI98 176 aa3.3□□□□□ -1.88
SPG11-220ENST00000559933 TSTD3H0UI37 97 aa3.3□□□□□ -1.88
SPG11-220ENST00000559933 K7ERJ3 54 aa3.3□□□□□ -1.88
SPG11-220ENST00000559933 TIMM17BO60830 172 aa3.3□□□□□ -1.88
SPG11-220ENST00000559933 DDTP30046 118 aa3.3□□□□□ -1.88
SPG11-220ENST00000559933 FXYD2P54710 66 aa3.3□□□□□ -1.88
SPG11-220ENST00000559933 MPLKIPQ8TAP9 179 aa3.3□□□□□ -1.88
SPG11-220ENST00000559933 SPACA4Q8TDM5 124 aa3.3□□□□□ -1.88
SPG11-220ENST00000559933 HIST1H4GQ99525 98 aa3.3□□□□□ -1.88
SPG11-220ENST00000559933 SPANXDQ9BXN6 97 aa3.3□□□□□ -1.88
SPG11-220ENST00000559933 SPANXCQ9NY87 97 aa3.3□□□□□ -1.88
SPG11-220ENST00000559933 GAGE10A6NGK3 116 aa3.29□□□□□ -1.88
SPG11-220ENST00000559933 F8WDY8 70 aa3.29□□□□□ -1.88
SPG11-220ENST00000559933 TLX1NBP0CAT3 122 aa3.29□□□□□ -1.88
SPG11-220ENST00000559933 HINT1P49773 126 aaPredicted RBP3.29□□□□□ -1.88
SPG11-220ENST00000559933 SRSF9Q13242 221 aaKnown RBP eCLIP3.29□□□□□ -1.88
SPG11-220ENST00000559933 BATFQ16520 125 aa3.29□□□□□ -1.88
SPG11-220ENST00000559933 PHF5AQ7RTV0 110 aaKnown RBP3.29□□□□□ -1.88
SPG11-220ENST00000559933 KRTAP11-1Q8IUC1 163 aa3.29□□□□□ -1.88
SPG11-220ENST00000559933 SPANXB1Q9NS25 103 aaPredicted RBP3.29□□□□□ -1.88
SPG11-220ENST00000559933 FAT1Q14517 4588 aa3.29□□□□□ -1.88
SPG11-220ENST00000559933 HERC1Q15751 4861 aa3.28□□□□□ -1.88
SPG11-220ENST00000559933 IGKV2-28A0A075B6P5 120 aa3.28□□□□□ -1.88
SPG11-220ENST00000559933 A0A087WYN8 130 aa3.28□□□□□ -1.88
SPG11-220ENST00000559933 A4D1N5 150 aa3.28□□□□□ -1.88
SPG11-220ENST00000559933 LINC00587B1AMM8 73 aa3.28□□□□□ -1.88
SPG11-220ENST00000559933 IGKV2D-28P01615 120 aa3.28□□□□□ -1.88
SPG11-220ENST00000559933 VPREB1P12018 145 aa3.28□□□□□ -1.88
SPG11-220ENST00000559933 HSD52Q0P140 79 aa3.28□□□□□ -1.88
SPG11-220ENST00000559933 CIRBPQ14011 172 aaKnown RBP3.28□□□□□ -1.88
SPG11-220ENST00000559933 COX17Q14061 63 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms