RNA–Protein interactions for RNA: ENST00000559849.5

CHRNB4-204, Transcript of cholinergic receptor nicotinic beta 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNB4, Length 2,080 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB4-204ENST00000559849 IGKV2-24A0A0C4DH68 120 aa8.7□□□□□ -1.02
CHRNB4-204ENST00000559849 A0A0J9YXV3 536 aa8.7□□□□□ -1.02
CHRNB4-204ENST00000559849 IGKCP01834 107 aa8.7□□□□□ -1.02
CHRNB4-204ENST00000559849 SPINK8P0C7L1 97 aa8.7□□□□□ -1.02
CHRNB4-204ENST00000559849 A0A087WYN8 130 aa8.69□□□□□ -1.02
CHRNB4-204ENST00000559849 NDUFA1O15239 70 aa8.69□□□□□ -1.02
CHRNB4-204ENST00000559849 DPM2O94777 84 aa8.69□□□□□ -1.02
CHRNB4-204ENST00000559849 PLA2G1BP04054 148 aaKnown RBP8.69□□□□□ -1.02
CHRNB4-204ENST00000559849 KIAA0087Q14695 138 aa8.69□□□□□ -1.02
CHRNB4-204ENST00000559849 TAL2Q16559 108 aa8.69□□□□□ -1.02
CHRNB4-204ENST00000559849 CDKN2A-AS1Q9UH64 79 aa8.69□□□□□ -1.02
CHRNB4-204ENST00000559849 A0A096LNI7 61 aa8.69□□□□□ -1.02
CHRNB4-204ENST00000559849 TINCRA0A1B0GVN0 87 aa8.69□□□□□ -1.02
CHRNB4-204ENST00000559849 HERV-K104P63124 156 aa8.69□□□□□ -1.02
CHRNB4-204ENST00000559849 LOC107984640A0A0U1RRK4 108 aa8.68□□□□□ -1.02
CHRNB4-204ENST00000559849 E9PLD3 99 aa8.68□□□□□ -1.02
CHRNB4-204ENST00000559849 F8VRH5 84 aa8.68□□□□□ -1.02
CHRNB4-204ENST00000559849 ETDBQ3ZM63 59 aa8.68□□□□□ -1.02
CHRNB4-204ENST00000559849 PLNP26678 52 aa8.68□□□□□ -1.02
CHRNB4-204ENST00000559849 PLAC8Q9NZF1 115 aa8.68□□□□□ -1.02
CHRNB4-204ENST00000559849 VPS13BQ7Z7G8 4022 aa8.68□□□□□ -1.02
CHRNB4-204ENST00000559849 UNQ6190/PRO20217Q6UXQ8 127 aa8.67□□□□□ -1.02
CHRNB4-204ENST00000559849 ANAPC13Q9BS18 74 aa8.67□□□□□ -1.02
CHRNB4-204ENST00000559849 PRSS2P07478 247 aa8.66□□□□□ -1.02
CHRNB4-204ENST00000559849 IGLV5-45A0A087WSX0 123 aa8.66□□□□□ -1.02
CHRNB4-204ENST00000559849 INAFM2P0DMQ5 153 aa8.66□□□□□ -1.02
CHRNB4-204ENST00000559849 C6orf226Q5I0X4 101 aa8.66□□□□□ -1.02
CHRNB4-204ENST00000559849 C10orf25Q5T742 122 aa8.66□□□□□ -1.02
CHRNB4-204ENST00000559849 CDIP1Q9H305 208 aa8.66□□□□□ -1.02
CHRNB4-204ENST00000559849 TOMM7Q9P0U1 55 aa8.66□□□□□ -1.02
CHRNB4-204ENST00000559849 GAGE2BQ13066 116 aa8.65□□□□□ -1.02
CHRNB4-204ENST00000559849 Q8IZM0 81 aa8.65□□□□□ -1.02
CHRNB4-204ENST00000559849 PRO0461Q9UI25 63 aa8.65□□□□□ -1.03
CHRNB4-204ENST00000559849 TRBV30A0A0K0K1B3 111 aa8.64□□□□□ -1.03
CHRNB4-204ENST00000559849 FXYD2P54710 66 aa8.64□□□□□ -1.03
CHRNB4-204ENST00000559849 C2orf82Q6UX34 121 aa8.64□□□□□ -1.03
CHRNB4-204ENST00000559849 C6orf48Q9UBA6 75 aa8.64□□□□□ -1.03
CHRNB4-204ENST00000559849 RPL18AQ02543 176 aaKnown RBP8.63□□□□□ -1.03
CHRNB4-204ENST00000559849 FLG2Q5D862 2391 aaPredicted RBP8.63□□□□□ -1.03
CHRNB4-204ENST00000559849 SMIM1B2RUZ4 78 aa8.63□□□□□ -1.03
CHRNB4-204ENST00000559849 H3BMG7 143 aa8.63□□□□□ -1.03
CHRNB4-204ENST00000559849 MT-ATP8P03928 68 aa8.63□□□□□ -1.03
CHRNB4-204ENST00000559849 TLX1NBP0CAT3 122 aa8.63□□□□□ -1.03
CHRNB4-204ENST00000559849 CEND1Q8N111 149 aa8.63□□□□□ -1.03
CHRNB4-204ENST00000559849 B5MCH6 92 aa8.62□□□□□ -1.03
CHRNB4-204ENST00000559849 NMUP48645 174 aa8.62□□□□□ -1.03
CHRNB4-204ENST00000559849 A0A1B0GWB2 263 aa8.61□□□□□ -1.03
CHRNB4-204ENST00000559849 PCP2Q8IVA1 136 aa8.61□□□□□ -1.03
CHRNB4-204ENST00000559849 C11orf86A6NJI1 115 aa8.61□□□□□ -1.03
CHRNB4-204ENST00000559849 RPL37AP61513 92 aaKnown RBP8.61□□□□□ -1.03
CHRNB4-204ENST00000559849 Q6ZRP5 223 aa8.61□□□□□ -1.03
CHRNB4-204ENST00000559849 NHP2Q9NX24 153 aaKnown RBP8.61□□□□□ -1.03
CHRNB4-204ENST00000559849 IGKV2D-26A0A0A0MRZ7 120 aa8.6□□□□□ -1.03
CHRNB4-204ENST00000559849 CXCL5P42830 114 aa8.6□□□□□ -1.03
CHRNB4-204ENST00000559849 KRTAP10-4P60372 401 aaPredicted RBP8.6□□□□□ -1.03
CHRNB4-204ENST00000559849 C7orf33Q8WU49 177 aa8.6□□□□□ -1.03
CHRNB4-204ENST00000559849 K7ERJ3 54 aa8.6□□□□□ -1.03
CHRNB4-204ENST00000559849 SMIM20Q8N5G0 67 aa8.6□□□□□ -1.03
CHRNB4-204ENST00000559849 COX7B2Q8TF08 81 aa8.6□□□□□ -1.03
CHRNB4-204ENST00000559849 NDUFC2-KCTD14E9PQ53 114 aa8.59□□□□□ -1.03
CHRNB4-204ENST00000559849 A0A1W2PNN7 141 aa8.58□□□□□ -1.04
CHRNB4-204ENST00000559849 ZNF22P17026 224 aaPredicted RBP8.58□□□□□ -1.04
CHRNB4-204ENST00000559849 C9orf116Q5BN46 136 aaPredicted RBP8.58□□□□□ -1.04
CHRNB4-204ENST00000559849 GAGE2EQ4V326 116 aa8.58□□□□□ -1.04
CHRNB4-204ENST00000559849 TMEM170BQ5T4T1 132 aa8.58□□□□□ -1.04
CHRNB4-204ENST00000559849 GAGE2DQ9UEU5 116 aa8.58□□□□□ -1.04
CHRNB4-204ENST00000559849 MYCBP2O75592 4640 aa8.57□□□□□ -1.04
CHRNB4-204ENST00000559849 IGLV5-39A0A0G2JS06 123 aa8.57□□□□□ -1.04
CHRNB4-204ENST00000559849 TTTY13Q9BZ97 58 aa8.57□□□□□ -1.04
CHRNB4-204ENST00000559849 HERVK_113P61574 105 aa8.56□□□□□ -1.04
CHRNB4-204ENST00000559849 PPDPFLQ8WWR9 84 aa8.56□□□□□ -1.04
CHRNB4-204ENST00000559849 DMBT1Q9UGM3 2413 aaPredicted RBP8.54□□□□□ -1.04
CHRNB4-204ENST00000559849 LYRM7Q5U5X0 104 aa8.53□□□□□ -1.04
CHRNB4-204ENST00000559849 TMEM223A0PJW6 202 aa8.53□□□□□ -1.04
CHRNB4-204ENST00000559849 NDUFV3P56181 108 aaKnown RBP8.52□□□□□ -1.05
CHRNB4-204ENST00000559849 TEN1Q86WV5 123 aa8.52□□□□□ -1.05
CHRNB4-204ENST00000559849 FAM168BA1KXE4 195 aa8.52□□□□□ -1.05
CHRNB4-204ENST00000559849 SMCPP49901 116 aaPredicted RBP8.52□□□□□ -1.05
CHRNB4-204ENST00000559849 C9orf129Q5T035 196 aaKnown RBP8.52□□□□□ -1.05
CHRNB4-204ENST00000559849 Q6Q795 121 aa8.52□□□□□ -1.05
CHRNB4-204ENST00000559849 MYMXA0A1B0GTQ4 84 aa8.51□□□□□ -1.05
CHRNB4-204ENST00000559849 M0QXV9 152 aa8.5□□□□□ -1.05
CHRNB4-204ENST00000559849 PRR3P79522 188 aaKnown RBP8.5□□□□□ -1.05
CHRNB4-204ENST00000559849 SFTA2Q6UW10 78 aa8.5□□□□□ -1.05
CHRNB4-204ENST00000559849 PHF5AQ7RTV0 110 aaKnown RBP8.5□□□□□ -1.05
CHRNB4-204ENST00000559849 FAM19A5Q7Z5A7 132 aaPredicted RBP8.5□□□□□ -1.05
CHRNB4-204ENST00000559849 IFITM1P13164 125 aa8.5□□□□□ -1.05
CHRNB4-204ENST00000559849 XAGE1AQ9HD64 81 aa8.5□□□□□ -1.05
CHRNB4-204ENST00000559849 ZNF815PA8K554 130 aa8.49□□□□□ -1.05
CHRNB4-204ENST00000559849 J3QQQ9 107 aa8.49□□□□□ -1.05
CHRNB4-204ENST00000559849 LEPROTO15243 131 aa8.49□□□□□ -1.05
CHRNB4-204ENST00000559849 TSPEAR-AS2P59090 65 aa8.49□□□□□ -1.05
CHRNB4-204ENST00000559849 HIST1H4GQ99525 98 aa8.49□□□□□ -1.05
CHRNB4-204ENST00000559849 TRBV20-1A0A075B6N2 111 aa8.49□□□□□ -1.05
CHRNB4-204ENST00000559849 CCDC179H3BU77 68 aa8.49□□□□□ -1.05
CHRNB4-204ENST00000559849 TMEM126AQ9H061 195 aa8.49□□□□□ -1.05
CHRNB4-204ENST00000559849 LGALS3P17931 250 aaKnown RBP8.48□□□□□ -1.05
CHRNB4-204ENST00000559849 KRTAP7-1Q8IUC3 87 aa8.48□□□□□ -1.05
CHRNB4-204ENST00000559849 PLEKHB2Q96CS7 222 aa8.48□□□□□ -1.05
CHRNB4-204ENST00000559849 SNCGO76070 127 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms