RNA–Protein interactions for RNA: ENST00000559774.6

LRRC28-215, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-215ENST00000559774 BOD1L2Q8IYS8 172 aa5.5□□□□□ -1.53
LRRC28-215ENST00000559774 MIR7-3HGQ8N6C7 128 aa5.5□□□□□ -1.53
LRRC28-215ENST00000559774 SND1-IT1Q9HBX3 110 aa5.5□□□□□ -1.53
LRRC28-215ENST00000559774 TP73-AS1Q9UF72 201 aa5.5□□□□□ -1.53
LRRC28-215ENST00000559774 IGLV5-37A0A075B6J1 123 aa5.49□□□□□ -1.53
LRRC28-215ENST00000559774 SMIM6P0DI80 62 aa5.49□□□□□ -1.53
LRRC28-215ENST00000559774 RPL24P83731 157 aaKnown RBP5.49□□□□□ -1.53
LRRC28-215ENST00000559774 LITAFQ99732 161 aa5.49□□□□□ -1.53
LRRC28-215ENST00000559774 XAGE1AQ9HD64 81 aa5.49□□□□□ -1.53
LRRC28-215ENST00000559774 PAM16Q9Y3D7 125 aa5.49□□□□□ -1.53
LRRC28-215ENST00000559774 LOC105371267A0A1B0GV96 52 aa5.48□□□□□ -1.53
LRRC28-215ENST00000559774 IFITM1P13164 125 aa5.48□□□□□ -1.53
LRRC28-215ENST00000559774 LBHQ53QV2 105 aaPredicted RBP5.48□□□□□ -1.53
LRRC28-215ENST00000559774 MIEN1Q9BRT3 115 aa5.48□□□□□ -1.53
LRRC28-215ENST00000559774 SPANXDQ9BXN6 97 aa5.48□□□□□ -1.53
LRRC28-215ENST00000559774 TTTY13Q9BZ97 58 aa5.48□□□□□ -1.53
LRRC28-215ENST00000559774 SPANXCQ9NY87 97 aa5.48□□□□□ -1.53
LRRC28-215ENST00000559774 BIRC6Q9NR09 4857 aa5.47□□□□□ -1.53
LRRC28-215ENST00000559774 APOBP04114 4563 aaKnown RBP5.47□□□□□ -1.53
LRRC28-215ENST00000559774 A0A0U1RRA0 63 aa5.47□□□□□ -1.53
LRRC28-215ENST00000559774 A0A1W2PNN7 141 aa5.47□□□□□ -1.53
LRRC28-215ENST00000559774 NDUFC2O95298 119 aa5.47□□□□□ -1.53
LRRC28-215ENST00000559774 LORP23490 312 aaPredicted RBP5.47□□□□□ -1.53
LRRC28-215ENST00000559774 ADAMTSL4-AS1Q5T5F5 129 aa5.47□□□□□ -1.53
LRRC28-215ENST00000559774 SLC25A34Q6PIV7 304 aa5.47□□□□□ -1.53
LRRC28-215ENST00000559774 C7orf33Q8WU49 177 aa5.47□□□□□ -1.53
LRRC28-215ENST00000559774 SPANXB1Q9NS25 103 aaPredicted RBP5.47□□□□□ -1.53
LRRC28-215ENST00000559774 VPREB1P12018 145 aa5.46□□□□□ -1.54
LRRC28-215ENST00000559774 HIGD1BQ9P298 99 aa5.46□□□□□ -1.54
LRRC28-215ENST00000559774 C22orf24Q9Y442 160 aa5.46□□□□□ -1.54
LRRC28-215ENST00000559774 TRBV10-2A0A0K0K1G8 114 aa5.45□□□□□ -1.54
LRRC28-215ENST00000559774 FAM168BA1KXE4 195 aa5.45□□□□□ -1.54
LRRC28-215ENST00000559774 M0QXV9 152 aa5.45□□□□□ -1.54
LRRC28-215ENST00000559774 FAM19A5Q7Z5A7 132 aaPredicted RBP5.45□□□□□ -1.54
LRRC28-215ENST00000559774 MRPL55Q7Z7F7 128 aaKnown RBP5.45□□□□□ -1.54
LRRC28-215ENST00000559774 KRTAP7-1Q8IUC3 87 aa5.45□□□□□ -1.54
LRRC28-215ENST00000559774 NKAPP1Q8N9T2 125 aa5.45□□□□□ -1.54
LRRC28-215ENST00000559774 LINC00308Q8TCZ7 52 aa5.45□□□□□ -1.54
LRRC28-215ENST00000559774 C14orf144Q96I85 54 aa5.45□□□□□ -1.54
LRRC28-215ENST00000559774 M0R378 163 aa5.44□□□□□ -1.54
LRRC28-215ENST00000559774 SRSF9Q13242 221 aaKnown RBP eCLIP5.44□□□□□ -1.54
LRRC28-215ENST00000559774 SERTAD4-AS1Q5TG53 156 aa5.44□□□□□ -1.54
LRRC28-215ENST00000559774 LINC00518Q8N0U6 118 aa5.44□□□□□ -1.54
LRRC28-215ENST00000559774 LINC00528Q8N1L1 170 aa5.44□□□□□ -1.54
LRRC28-215ENST00000559774 DAND5Q8N907 189 aa5.44□□□□□ -1.54
LRRC28-215ENST00000559774 FAM229AH3BQW9 127 aa5.43□□□□□ -1.54
LRRC28-215ENST00000559774 TAL2Q16559 108 aa5.43□□□□□ -1.54
LRRC28-215ENST00000559774 Q8N1X5 172 aa5.43□□□□□ -1.54
LRRC28-215ENST00000559774 UQCR10Q9UDW1 63 aa5.43□□□□□ -1.54
LRRC28-215ENST00000559774 CBY1Q9Y3M2 126 aa5.43□□□□□ -1.54
LRRC28-215ENST00000559774 RYR1P21817 5038 aa5.42□□□□□ -1.54
LRRC28-215ENST00000559774 PLA2G1BP04054 148 aaKnown RBP5.42□□□□□ -1.54
LRRC28-215ENST00000559774 SOSTDC1Q6X4U4 206 aa5.42□□□□□ -1.54
LRRC28-215ENST00000559774 PHF5AQ7RTV0 110 aaKnown RBP5.42□□□□□ -1.54
LRRC28-215ENST00000559774 LINC00167Q96N53 147 aa5.42□□□□□ -1.54
LRRC28-215ENST00000559774 KIAA1109Q2LD37 5005 aa5.42□□□□□ -1.54
LRRC28-215ENST00000559774 IGLV1-50A0A075B6I6 118 aa5.41□□□□□ -1.54
LRRC28-215ENST00000559774 UBE2BP63146 152 aa5.41□□□□□ -1.54
LRRC28-215ENST00000559774 C2orf91Q6ZV80 131 aa5.41□□□□□ -1.54
LRRC28-215ENST00000559774 MUSTN1Q8IVN3 82 aa5.41□□□□□ -1.54
LRRC28-215ENST00000559774 HIST1H4GQ99525 98 aa5.41□□□□□ -1.54
LRRC28-215ENST00000559774 HSPG2P98160 4391 aa5.41□□□□□ -1.54
LRRC28-215ENST00000559774 EIF4EBP3O60516 100 aaPredicted RBP5.4□□□□□ -1.54
LRRC28-215ENST00000559774 HAMPP81172 84 aa5.4□□□□□ -1.54
LRRC28-215ENST00000559774 Q8NDZ9 215 aa5.4□□□□□ -1.54
LRRC28-215ENST00000559774 IGLV6-57P01721 117 aa5.39□□□□□ -1.55
LRRC28-215ENST00000559774 SMR3BP02814 79 aaPredicted RBP5.39□□□□□ -1.55
LRRC28-215ENST00000559774 RPL37AP61513 92 aaKnown RBP5.39□□□□□ -1.55
LRRC28-215ENST00000559774 NPC2P61916 151 aa5.39□□□□□ -1.55
LRRC28-215ENST00000559774 C12orf57Q99622 126 aa5.39□□□□□ -1.55
LRRC28-215ENST00000559774 TMEM126AQ9H061 195 aa5.39□□□□□ -1.55
LRRC28-215ENST00000559774 KCNQ1DNQ9H478 68 aa5.39□□□□□ -1.55
LRRC28-215ENST00000559774 TRAV13-2A0A0B4J235 113 aa5.38□□□□□ -1.55
LRRC28-215ENST00000559774 TSTD3H0UI37 97 aa5.38□□□□□ -1.55
LRRC28-215ENST00000559774 DDTP30046 118 aa5.38□□□□□ -1.55
LRRC28-215ENST00000559774 PRR3P79522 188 aaKnown RBP5.38□□□□□ -1.55
LRRC28-215ENST00000559774 S100A7L2Q5SY68 101 aa5.38□□□□□ -1.55
LRRC28-215ENST00000559774 PSORS1C2Q9UIG4 136 aa5.38□□□□□ -1.55
LRRC28-215ENST00000559774 FAT1Q14517 4588 aa5.37□□□□□ -1.55
LRRC28-215ENST00000559774 IGKV2-28A0A075B6P5 120 aa5.37□□□□□ -1.55
LRRC28-215ENST00000559774 TMEM238LA0A1B0GVL6 79 aa5.37□□□□□ -1.55
LRRC28-215ENST00000559774 GAGE10A6NGK3 116 aa5.37□□□□□ -1.55
LRRC28-215ENST00000559774 A6NJY4 79 aa5.37□□□□□ -1.55
LRRC28-215ENST00000559774 PRYO14603 147 aa5.37□□□□□ -1.55
LRRC28-215ENST00000559774 NCR3O14931 201 aa5.37□□□□□ -1.55
LRRC28-215ENST00000559774 IGKV2D-28P01615 120 aa5.37□□□□□ -1.55
LRRC28-215ENST00000559774 HSD52Q0P140 79 aa5.37□□□□□ -1.55
LRRC28-215ENST00000559774 Q5VSD8 79 aa5.37□□□□□ -1.55
LRRC28-215ENST00000559774 CEND1Q8N111 149 aa5.37□□□□□ -1.55
LRRC28-215ENST00000559774 HERC2O95714 4834 aa5.36□□□□□ -1.55
LRRC28-215ENST00000559774 TRBV10-3A0A0K0K1G6 114 aa5.36□□□□□ -1.55
LRRC28-215ENST00000559774 A4D1N5 150 aa5.36□□□□□ -1.55
LRRC28-215ENST00000559774 RPL37AP8A6NKH3 93 aa5.36□□□□□ -1.55
LRRC28-215ENST00000559774 BCE1O60756 84 aa5.36□□□□□ -1.55
LRRC28-215ENST00000559774 HNRNPA3P51991 378 aaKnown RBP5.36□□□□□ -1.55
LRRC28-215ENST00000559774 KRTAP10-4P60372 401 aaPredicted RBP5.36□□□□□ -1.55
LRRC28-215ENST00000559774 REG3GQ6UW15 175 aa5.36□□□□□ -1.55
LRRC28-215ENST00000559774 H0Y9J4 135 aa5.35□□□□□ -1.55
LRRC28-215ENST00000559774 SPRR1AP35321 89 aa5.35□□□□□ -1.55
LRRC28-215ENST00000559774 C1orf137Q5JT78 98 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms