RNA–Protein interactions for RNA: ENST00000559080.1

CHRNA3-205, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-205ENST00000559080 UBE2AP49459 152 aa6.68□□□□□ -1.34
CHRNA3-205ENST00000559080 H0Y8G0 127 aa6.67□□□□□ -1.34
CHRNA3-205ENST00000559080 SCO1O75880 301 aa6.67□□□□□ -1.34
CHRNA3-205ENST00000559080 VPREB1P12018 145 aa6.67□□□□□ -1.34
CHRNA3-205ENST00000559080 LINC00158P58513 81 aa6.67□□□□□ -1.34
CHRNA3-205ENST00000559080 FAM19A2Q8N3H0 131 aa6.67□□□□□ -1.34
CHRNA3-205ENST00000559080 ATP6V1G1O75348 118 aa6.65□□□□□ -1.34
CHRNA3-205ENST00000559080 SERF1AO75920 110 aa6.65□□□□□ -1.34
CHRNA3-205ENST00000559080 LEPROTL1O95214 131 aa6.65□□□□□ -1.34
CHRNA3-205ENST00000559080 MEIG1Q5JSS6 88 aa6.65□□□□□ -1.34
CHRNA3-205ENST00000559080 SLC7A5P1Q8MH63 180 aa6.65□□□□□ -1.34
CHRNA3-205ENST00000559080 A0A0U1RRA0 63 aa6.64□□□□□ -1.35
CHRNA3-205ENST00000559080 FAM19A1Q7Z5A9 133 aa6.64□□□□□ -1.35
CHRNA3-205ENST00000559080 TMEM126AQ9H061 195 aa6.64□□□□□ -1.35
CHRNA3-205ENST00000559080 HSPB8Q9UJY1 196 aa6.64□□□□□ -1.35
CHRNA3-205ENST00000559080 CRYGAP11844 174 aa6.63□□□□□ -1.35
CHRNA3-205ENST00000559080 PLNP26678 52 aa6.63□□□□□ -1.35
CHRNA3-205ENST00000559080 HERV-K104P63124 156 aa6.63□□□□□ -1.35
CHRNA3-205ENST00000559080 PRLHP81277 87 aa6.63□□□□□ -1.35
CHRNA3-205ENST00000559080 KRTAP13-1Q8IUC0 172 aa6.63□□□□□ -1.35
CHRNA3-205ENST00000559080 LINC00587B1AMM8 73 aa6.62□□□□□ -1.35
CHRNA3-205ENST00000559080 TMEM238C9JI98 176 aa6.62□□□□□ -1.35
CHRNA3-205ENST00000559080 SMIM13P0DJ93 91 aa6.62□□□□□ -1.35
CHRNA3-205ENST00000559080 LINC00310P59036 64 aa6.62□□□□□ -1.35
CHRNA3-205ENST00000559080 NDUFA12Q9UI09 145 aa6.62□□□□□ -1.35
CHRNA3-205ENST00000559080 A0A087X002 238 aa6.61□□□□□ -1.35
CHRNA3-205ENST00000559080 MYMXA0A1B0GTQ4 84 aa6.61□□□□□ -1.35
CHRNA3-205ENST00000559080 M0R378 163 aa6.61□□□□□ -1.35
CHRNA3-205ENST00000559080 HERVK_113P61574 105 aa6.61□□□□□ -1.35
CHRNA3-205ENST00000559080 Q8NDZ9 215 aa6.61□□□□□ -1.35
CHRNA3-205ENST00000559080 TYMSOSQ8TAI1 123 aa6.61□□□□□ -1.35
CHRNA3-205ENST00000559080 MAP1LC3CQ9BXW4 147 aa6.61□□□□□ -1.35
CHRNA3-205ENST00000559080 DPM2O94777 84 aa6.6□□□□□ -1.35
CHRNA3-205ENST00000559080 FABP4P15090 132 aa6.6□□□□□ -1.35
CHRNA3-205ENST00000559080 BOD1L2Q8IYS8 172 aa6.6□□□□□ -1.35
CHRNA3-205ENST00000559080 MIR7-3HGQ8N6C7 128 aa6.6□□□□□ -1.35
CHRNA3-205ENST00000559080 PLEKHB2Q96CS7 222 aa6.6□□□□□ -1.35
CHRNA3-205ENST00000559080 COLCA2A8K830 154 aa6.59□□□□□ -1.35
CHRNA3-205ENST00000559080 LEPROTO15243 131 aa6.59□□□□□ -1.35
CHRNA3-205ENST00000559080 FAM229BQ4G0N7 80 aa6.59□□□□□ -1.35
CHRNA3-205ENST00000559080 NCR3O14931 201 aa6.58□□□□□ -1.36
CHRNA3-205ENST00000559080 TSPEAR-AS2P59090 65 aa6.58□□□□□ -1.36
CHRNA3-205ENST00000559080 ANAPC11Q9NYG5 84 aa6.58□□□□□ -1.36
CHRNA3-205ENST00000559080 IGKV2D-26A0A0A0MRZ7 120 aa6.57□□□□□ -1.36
CHRNA3-205ENST00000559080 J3QQQ9 107 aa6.57□□□□□ -1.36
CHRNA3-205ENST00000559080 PRYO14603 147 aa6.57□□□□□ -1.36
CHRNA3-205ENST00000559080 TSPAN13O95857 204 aa6.57□□□□□ -1.36
CHRNA3-205ENST00000559080 IGKCP01834 107 aa6.57□□□□□ -1.36
CHRNA3-205ENST00000559080 LGALS3P17931 250 aaKnown RBP6.57□□□□□ -1.36
CHRNA3-205ENST00000559080 S100A12P80511 92 aa6.57□□□□□ -1.36
CHRNA3-205ENST00000559080 PMCHL2Q9BQD1 86 aa6.57□□□□□ -1.36
CHRNA3-205ENST00000559080 HIGD2AQ9BW72 106 aa6.57□□□□□ -1.36
CHRNA3-205ENST00000559080 NMUP48645 174 aa6.56□□□□□ -1.36
CHRNA3-205ENST00000559080 MIEN1Q9BRT3 115 aa6.56□□□□□ -1.36
CHRNA3-205ENST00000559080 KRTAP13-2Q52LG2 175 aa6.55□□□□□ -1.36
CHRNA3-205ENST00000559080 ETDCA0A1B0GVM5 59 aa6.54□□□□□ -1.36
CHRNA3-205ENST00000559080 LCE2DQ5TA82 110 aaPredicted RBP6.54□□□□□ -1.36
CHRNA3-205ENST00000559080 DAND5Q8N907 189 aa6.54□□□□□ -1.36
CHRNA3-205ENST00000559080 LINC00304Q8N9R0 145 aa6.54□□□□□ -1.36
CHRNA3-205ENST00000559080 ZNF706Q9Y5V0 76 aaPredicted RBP6.54□□□□□ -1.36
CHRNA3-205ENST00000559080 LINC00337Q8N6G1 96 aa6.53□□□□□ -1.36
CHRNA3-205ENST00000559080 KCNQ1DNQ9H478 68 aa6.53□□□□□ -1.36
CHRNA3-205ENST00000559080 TRBV10-3A0A0K0K1G6 114 aa6.52□□□□□ -1.37
CHRNA3-205ENST00000559080 HIST1H2BKO60814 126 aa6.52□□□□□ -1.37
CHRNA3-205ENST00000559080 HIST1H2BJP06899 126 aa6.52□□□□□ -1.37
CHRNA3-205ENST00000559080 HIST1H2BOP23527 126 aa6.52□□□□□ -1.37
CHRNA3-205ENST00000559080 HIST1H2BBP33778 126 aa6.52□□□□□ -1.37
CHRNA3-205ENST00000559080 HIST1H2BDP58876 126 aa6.52□□□□□ -1.37
CHRNA3-205ENST00000559080 HIST1H2BCP62807 126 aa6.52□□□□□ -1.37
CHRNA3-205ENST00000559080 HIST2H2BEQ16778 126 aa6.52□□□□□ -1.37
CHRNA3-205ENST00000559080 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.52□□□□□ -1.37
CHRNA3-205ENST00000559080 HIST1H2BHQ93079 126 aa6.52□□□□□ -1.37
CHRNA3-205ENST00000559080 SPRR4Q96PI1 79 aa6.52□□□□□ -1.37
CHRNA3-205ENST00000559080 HIST1H2BNQ99877 126 aa6.52□□□□□ -1.37
CHRNA3-205ENST00000559080 HIST1H2BMQ99879 126 aa6.52□□□□□ -1.37
CHRNA3-205ENST00000559080 CRCT1Q9UGL9 99 aa6.52□□□□□ -1.37
CHRNA3-205ENST00000559080 TRBV10-2A0A0K0K1G8 114 aa6.51□□□□□ -1.37
CHRNA3-205ENST00000559080 E9PLD3 99 aa6.51□□□□□ -1.37
CHRNA3-205ENST00000559080 SYS1-DBNDD2H3BUS1 97 aa6.51□□□□□ -1.37
CHRNA3-205ENST00000559080 DDTP30046 118 aa6.51□□□□□ -1.37
CHRNA3-205ENST00000559080 SPRR1AP35321 89 aa6.51□□□□□ -1.37
CHRNA3-205ENST00000559080 SPANXB1Q9NS25 103 aaPredicted RBP6.51□□□□□ -1.37
CHRNA3-205ENST00000559080 LOC107984156A0A0G2JMH3 177 aa6.5□□□□□ -1.37
CHRNA3-205ENST00000559080 ARL17AQ8IVW1 177 aa6.5□□□□□ -1.37
CHRNA3-205ENST00000559080 MUC17Q685J3 4493 aa6.49□□□□□ -1.37
CHRNA3-205ENST00000559080 A0A0J9YXY3 114 aa6.49□□□□□ -1.37
CHRNA3-205ENST00000559080 S100A7L2Q5SY68 101 aa6.49□□□□□ -1.37
CHRNA3-205ENST00000559080 C3orf22Q8N5N4 141 aa6.49□□□□□ -1.37
CHRNA3-205ENST00000559080 FSIP2Q5CZC0 6907 aa6.48□□□□□ -1.37
CHRNA3-205ENST00000559080 KRTAP4-16G5E9R7 235 aaPredicted RBP6.48□□□□□ -1.37
CHRNA3-205ENST00000559080 NDUFC2O95298 119 aa6.48□□□□□ -1.37
CHRNA3-205ENST00000559080 NPC2P61916 151 aa6.48□□□□□ -1.37
CHRNA3-205ENST00000559080 LINC01545Q5VT33 79 aa6.48□□□□□ -1.37
CHRNA3-205ENST00000559080 PET117Q6UWS5 81 aa6.48□□□□□ -1.37
CHRNA3-205ENST00000559080 SMCR5Q8TEV8 140 aa6.48□□□□□ -1.37
CHRNA3-205ENST00000559080 CTAG1AP78358 180 aa6.47□□□□□ -1.37
CHRNA3-205ENST00000559080 TPRXLQ17RH7 258 aa6.47□□□□□ -1.37
CHRNA3-205ENST00000559080 RETNLBQ9BQ08 111 aa6.47□□□□□ -1.37
CHRNA3-205ENST00000559080 TRAV23DV6A0A075B6W5 121 aa6.46□□□□□ -1.38
CHRNA3-205ENST00000559080 B5MCH6 92 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms