RNA–Protein interactions for RNA: ENST00000558806.5

AP3S2-206, Transcript of adaptor related protein complex 3 subunit sigma 2, humanhuman

TSL 1 (best)

Gene AP3S2, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2-206ENST00000558806 Q8NDZ9 215 aa6.12□□□□□ -1.43
AP3S2-206ENST00000558806 A0A096LNJ9 63 aa6.11□□□□□ -1.43
AP3S2-206ENST00000558806 KRTAP9-6A0A140TA67 174 aa6.11□□□□□ -1.43
AP3S2-206ENST00000558806 TMEM218A2RU14 115 aa6.11□□□□□ -1.43
AP3S2-206ENST00000558806 C4orf48Q5BLP8 95 aa6.11□□□□□ -1.43
AP3S2-206ENST00000558806 SPRR4Q96PI1 79 aa6.11□□□□□ -1.43
AP3S2-206ENST00000558806 ZNF706Q9Y5V0 76 aaPredicted RBP6.11□□□□□ -1.43
AP3S2-206ENST00000558806 HBDP02042 147 aa6.1□□□□□ -1.43
AP3S2-206ENST00000558806 TMEM170BQ5T4T1 132 aa6.1□□□□□ -1.43
AP3S2-206ENST00000558806 SEC11CQ9BY50 192 aa6.1□□□□□ -1.43
AP3S2-206ENST00000558806 LINC00614P0C842 121 aa6.09□□□□□ -1.43
AP3S2-206ENST00000558806 LINC00158P58513 81 aa6.09□□□□□ -1.43
AP3S2-206ENST00000558806 LINC00337Q8N6G1 96 aa6.09□□□□□ -1.43
AP3S2-206ENST00000558806 C11orf86A6NJI1 115 aa6.08□□□□□ -1.44
AP3S2-206ENST00000558806 BAGE3Q86Y29 109 aa6.08□□□□□ -1.44
AP3S2-206ENST00000558806 PRYO14603 147 aa6.07□□□□□ -1.44
AP3S2-206ENST00000558806 Q8NBF4 154 aa6.07□□□□□ -1.44
AP3S2-206ENST00000558806 C18orf32Q8TCD1 76 aa6.07□□□□□ -1.44
AP3S2-206ENST00000558806 URB1-AS1Q96HZ7 61 aa6.07□□□□□ -1.44
AP3S2-206ENST00000558806 ATP6V1G1O75348 118 aa6.06□□□□□ -1.44
AP3S2-206ENST00000558806 SPINK1P00995 79 aa6.06□□□□□ -1.44
AP3S2-206ENST00000558806 PMCHL1Q16048 86 aa6.06□□□□□ -1.44
AP3S2-206ENST00000558806 KRTAP13-3Q3SY46 172 aa6.06□□□□□ -1.44
AP3S2-206ENST00000558806 ASB16-AS1Q495Z4 193 aa6.06□□□□□ -1.44
AP3S2-206ENST00000558806 A0A0U1RRA0 63 aa6.05□□□□□ -1.44
AP3S2-206ENST00000558806 SPRR1AP35321 89 aa6.05□□□□□ -1.44
AP3S2-206ENST00000558806 RHEBQ15382 184 aa6.05□□□□□ -1.44
AP3S2-206ENST00000558806 BOD1L2Q8IYS8 172 aa6.05□□□□□ -1.44
AP3S2-206ENST00000558806 DAND5Q8N907 189 aa6.05□□□□□ -1.44
AP3S2-206ENST00000558806 KCNQ1DNQ9H478 68 aa6.05□□□□□ -1.44
AP3S2-206ENST00000558806 CHTOPQ9Y3Y2 248 aaKnown RBP6.05□□□□□ -1.44
AP3S2-206ENST00000558806 TRAPPC1Q9Y5R8 145 aa6.05□□□□□ -1.44
AP3S2-206ENST00000558806 ETDCA0A1B0GVM5 59 aa6.04□□□□□ -1.44
AP3S2-206ENST00000558806 TMEM223A0PJW6 202 aa6.04□□□□□ -1.44
AP3S2-206ENST00000558806 SMCR5Q8TEV8 140 aa6.04□□□□□ -1.44
AP3S2-206ENST00000558806 RPS10P5Q9NQ39 176 aa6.04□□□□□ -1.44
AP3S2-206ENST00000558806 NDUFA12Q9UI09 145 aa6.04□□□□□ -1.44
AP3S2-206ENST00000558806 LINC00587B1AMM8 73 aa6.03□□□□□ -1.44
AP3S2-206ENST00000558806 NCR3O14931 201 aa6.03□□□□□ -1.44
AP3S2-206ENST00000558806 SMIM13P0DJ93 91 aa6.03□□□□□ -1.44
AP3S2-206ENST00000558806 LINC01547P58512 204 aaPredicted RBP6.03□□□□□ -1.44
AP3S2-206ENST00000558806 SEC61BP60468 96 aaKnown RBP6.03□□□□□ -1.44
AP3S2-206ENST00000558806 HERV-K104P63124 156 aa6.03□□□□□ -1.44
AP3S2-206ENST00000558806 S100A12P80511 92 aa6.03□□□□□ -1.44
AP3S2-206ENST00000558806 LINC00483Q53H64 154 aa6.03□□□□□ -1.44
AP3S2-206ENST00000558806 MEIG1Q5JSS6 88 aa6.03□□□□□ -1.44
AP3S2-206ENST00000558806 TRAV12-1A0A0B4J245 112 aa6.02□□□□□ -1.45
AP3S2-206ENST00000558806 KRTAP4-16G5E9R7 235 aaPredicted RBP6.02□□□□□ -1.45
AP3S2-206ENST00000558806 RPS29P62273 56 aaKnown RBP6.02□□□□□ -1.45
AP3S2-206ENST00000558806 C10orf91Q5T1B1 145 aa6.02□□□□□ -1.45
AP3S2-206ENST00000558806 FAM19A2Q8N3H0 131 aa6.02□□□□□ -1.45
AP3S2-206ENST00000558806 MIR7-3HGQ8N6C7 128 aa6.02□□□□□ -1.45
AP3S2-206ENST00000558806 TRBV10-3A0A0K0K1G6 114 aa6□□□□□ -1.45
AP3S2-206ENST00000558806 MOBPQ13875 183 aa6□□□□□ -1.45
AP3S2-206ENST00000558806 GAGE2AQ6NT46 116 aa6□□□□□ -1.45
AP3S2-206ENST00000558806 SSBP3-AS1Q7Z2R9 100 aa6□□□□□ -1.45
AP3S2-206ENST00000558806 COMMD7Q86VX2 200 aa6□□□□□ -1.45
AP3S2-206ENST00000558806 IFI27L1Q96BM0 104 aa6□□□□□ -1.45
AP3S2-206ENST00000558806 MAP1LC3CQ9BXW4 147 aa6□□□□□ -1.45
AP3S2-206ENST00000558806 IGLV9-49A0A0B4J1Y8 123 aa5.99□□□□□ -1.45
AP3S2-206ENST00000558806 IFITM2Q01629 132 aa5.99□□□□□ -1.45
AP3S2-206ENST00000558806 Q8N377 158 aa5.99□□□□□ -1.45
AP3S2-206ENST00000558806 MYMXA0A1B0GTQ4 84 aa5.98□□□□□ -1.45
AP3S2-206ENST00000558806 B5MCH6 92 aa5.98□□□□□ -1.45
AP3S2-206ENST00000558806 SLC25A20O43772 301 aa5.98□□□□□ -1.45
AP3S2-206ENST00000558806 CHCHD1Q96BP2 118 aaKnown RBP5.98□□□□□ -1.45
AP3S2-206ENST00000558806 KRTAP4-1Q9BYQ7 146 aa5.98□□□□□ -1.45
AP3S2-206ENST00000558806 TRBV10-2A0A0K0K1G8 114 aa5.97□□□□□ -1.45
AP3S2-206ENST00000558806 LOC107984156A0A0G2JMH3 177 aa5.96□□□□□ -1.46
AP3S2-206ENST00000558806 ERC2-IT1O76042 136 aa5.96□□□□□ -1.46
AP3S2-206ENST00000558806 DDTP30046 118 aa5.96□□□□□ -1.46
AP3S2-206ENST00000558806 LCE2DQ5TA82 110 aaPredicted RBP5.96□□□□□ -1.46
AP3S2-206ENST00000558806 Q6ZRX8 168 aa5.96□□□□□ -1.46
AP3S2-206ENST00000558806 ARL17AQ8IVW1 177 aa5.96□□□□□ -1.46
AP3S2-206ENST00000558806 XP32Q5T750 250 aa5.95□□□□□ -1.46
AP3S2-206ENST00000558806 Q9BRP9 147 aa5.95□□□□□ -1.46
AP3S2-206ENST00000558806 MIEN1Q9BRT3 115 aa5.94□□□□□ -1.46
AP3S2-206ENST00000558806 SPANXB1Q9NS25 103 aaPredicted RBP5.94□□□□□ -1.46
AP3S2-206ENST00000558806 JOSD1Q15040 202 aaPredicted RBP5.93□□□□□ -1.46
AP3S2-206ENST00000558806 S100A7L2Q5SY68 101 aa5.93□□□□□ -1.46
AP3S2-206ENST00000558806 C9orf153Q5TBE3 101 aa5.93□□□□□ -1.46
AP3S2-206ENST00000558806 LEPROTO15243 131 aa5.92□□□□□ -1.46
AP3S2-206ENST00000558806 HSBP1O75506 76 aa5.92□□□□□ -1.46
AP3S2-206ENST00000558806 SNAPINO95295 136 aa5.92□□□□□ -1.46
AP3S2-206ENST00000558806 NDUFC2O95298 119 aa5.92□□□□□ -1.46
AP3S2-206ENST00000558806 APOC3P02656 99 aa5.92□□□□□ -1.46
AP3S2-206ENST00000558806 TSPEAR-AS2P59090 65 aa5.92□□□□□ -1.46
AP3S2-206ENST00000558806 NDUFA5Q16718 116 aa5.92□□□□□ -1.46
AP3S2-206ENST00000558806 SVBPQ8N300 66 aa5.92□□□□□ -1.46
AP3S2-206ENST00000558806 TRAV23DV6A0A075B6W5 121 aa5.91□□□□□ -1.46
AP3S2-206ENST00000558806 H0Y8G0 127 aa5.91□□□□□ -1.46
AP3S2-206ENST00000558806 IGLV6-57P01721 117 aa5.91□□□□□ -1.46
AP3S2-206ENST00000558806 PLNP26678 52 aa5.91□□□□□ -1.46
AP3S2-206ENST00000558806 NMUP48645 174 aa5.91□□□□□ -1.46
AP3S2-206ENST00000558806 J3QQQ9 107 aa5.9□□□□□ -1.46
AP3S2-206ENST00000558806 FSIP2Q5CZC0 6907 aa5.89□□□□□ -1.47
AP3S2-206ENST00000558806 C5orf52A6NGY3 159 aa5.89□□□□□ -1.47
AP3S2-206ENST00000558806 ZNF73O43830 326 aaPredicted RBP5.89□□□□□ -1.47
AP3S2-206ENST00000558806 LEPROTL1O95214 131 aa5.89□□□□□ -1.47
AP3S2-206ENST00000558806 HERVK_113P61574 105 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms