RNA–Protein interactions for RNA: ENST00000558662.5

HMBOX1-212, Transcript of homeobox containing 1, humanhuman

TSL 5 BASIC

Gene HMBOX1, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-212ENST00000558662 C9orf116Q5BN46 136 aaPredicted RBP10.89□□□□□ -0.67
HMBOX1-212ENST00000558662 PRO0255Q9UI72 69 aa10.89□□□□□ -0.67
HMBOX1-212ENST00000558662 USP24Q9UPU5 2620 aa10.89□□□□□ -0.67
HMBOX1-212ENST00000558662 CREBBPQ92793 2442 aa10.88□□□□□ -0.67
HMBOX1-212ENST00000558662 REG3AQ06141 175 aa10.88□□□□□ -0.67
HMBOX1-212ENST00000558662 C1orf64Q8NEQ6 169 aa10.88□□□□□ -0.67
HMBOX1-212ENST00000558662 HIVEP3Q5T1R4 2406 aa10.87□□□□□ -0.67
HMBOX1-212ENST00000558662 LINC01006Q8NI28 216 aa10.86□□□□□ -0.67
HMBOX1-212ENST00000558662 UNQ6190/PRO20217Q6UXQ8 127 aa10.85□□□□□ -0.67
HMBOX1-212ENST00000558662 LINC00528Q8N1L1 170 aa10.85□□□□□ -0.67
HMBOX1-212ENST00000558662 IGSF10Q6WRI0 2623 aa10.84□□□□□ -0.67
HMBOX1-212ENST00000558662 ETDCA0A1B0GVM5 59 aa10.84□□□□□ -0.67
HMBOX1-212ENST00000558662 M0R378 163 aa10.84□□□□□ -0.67
HMBOX1-212ENST00000558662 CYSRT1A8MQ03 144 aa10.83□□□□□ -0.68
HMBOX1-212ENST00000558662 CLPSL2Q6UWE3 100 aa10.83□□□□□ -0.68
HMBOX1-212ENST00000558662 ANGP03950 147 aaKnown RBP10.82□□□□□ -0.68
HMBOX1-212ENST00000558662 NBASA2RRP1 2371 aa10.82□□□□□ -0.68
HMBOX1-212ENST00000558662 IGLV5-48A0A075B6I7 105 aa10.82□□□□□ -0.68
HMBOX1-212ENST00000558662 TRAV22A0A0B4J277 110 aa10.82□□□□□ -0.68
HMBOX1-212ENST00000558662 UBE2BP63146 152 aa10.82□□□□□ -0.68
HMBOX1-212ENST00000558662 Q8N9L7 120 aa10.81□□□□□ -0.68
HMBOX1-212ENST00000558662 C10orf25Q5T742 122 aa10.8□□□□□ -0.68
HMBOX1-212ENST00000558662 CFAP46Q8IYW2 2715 aa10.8□□□□□ -0.68
HMBOX1-212ENST00000558662 SMIM29Q86T20 159 aa10.8□□□□□ -0.68
HMBOX1-212ENST00000558662 C19orf73Q9NVV2 129 aa10.8□□□□□ -0.68
HMBOX1-212ENST00000558662 PSCAO43653 123 aa10.78□□□□□ -0.68
HMBOX1-212ENST00000558662 VPREB1P12018 145 aa10.78□□□□□ -0.68
HMBOX1-212ENST00000558662 PRB1P04280 392 aa10.77□□□□□ -0.68
HMBOX1-212ENST00000558662 RELNP78509 3460 aa10.77□□□□□ -0.68
HMBOX1-212ENST00000558662 FAM30AQ9NZY2 134 aa10.77□□□□□ -0.69
HMBOX1-212ENST00000558662 DEFB130BP0DP73 79 aa10.76□□□□□ -0.69
HMBOX1-212ENST00000558662 DEFB130AP0DP74 79 aa10.76□□□□□ -0.69
HMBOX1-212ENST00000558662 UBE2AP49459 152 aa10.76□□□□□ -0.69
HMBOX1-212ENST00000558662 CR1P17927 2039 aa10.76□□□□□ -0.69
HMBOX1-212ENST00000558662 LIMD2Q9BT23 127 aa10.75□□□□□ -0.69
HMBOX1-212ENST00000558662 PRR34Q9NV39 138 aa10.75□□□□□ -0.69
HMBOX1-212ENST00000558662 IGLV10-54A0A075B6I4 117 aa10.75□□□□□ -0.69
HMBOX1-212ENST00000558662 IGLV1-51P01701 117 aa10.75□□□□□ -0.69
HMBOX1-212ENST00000558662 EGFEM1PQ0D2K5 195 aa10.75□□□□□ -0.69
HMBOX1-212ENST00000558662 CSPG4Q6UVK1 2322 aa10.75□□□□□ -0.69
HMBOX1-212ENST00000558662 KPRPQ5T749 579 aaPredicted RBP10.74□□□□□ -0.69
HMBOX1-212ENST00000558662 MRPL55Q7Z7F7 128 aaKnown RBP10.74□□□□□ -0.69
HMBOX1-212ENST00000558662 C6orf48Q9UBA6 75 aa10.74□□□□□ -0.69
HMBOX1-212ENST00000558662 C2CD3Q4AC94 2353 aa10.74□□□□□ -0.69
HMBOX1-212ENST00000558662 H3BPC8 53 aa10.72□□□□□ -0.69
HMBOX1-212ENST00000558662 SPANXA2-OT1Q8N9U9 137 aa10.72□□□□□ -0.69
HMBOX1-212ENST00000558662 KLK12Q9UKR0 248 aa10.72□□□□□ -0.69
HMBOX1-212ENST00000558662 SYCNQ0VAF6 134 aa10.72□□□□□ -0.69
HMBOX1-212ENST00000558662 KTN1-AS1Q86SY8 53 aa10.72□□□□□ -0.69
HMBOX1-212ENST00000558662 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.71□□□□□ -0.69
HMBOX1-212ENST00000558662 PSPHP1O15172 72 aa10.71□□□□□ -0.69
HMBOX1-212ENST00000558662 C3orf84H3BNL1 204 aa10.7□□□□□ -0.7
HMBOX1-212ENST00000558662 NDUFS5O43920 106 aa10.7□□□□□ -0.7
HMBOX1-212ENST00000558662 LELP1Q5T871 98 aa10.7□□□□□ -0.7
HMBOX1-212ENST00000558662 SPRR4Q96PI1 79 aa10.7□□□□□ -0.7
HMBOX1-212ENST00000558662 WNK1Q9H4A3 2382 aa10.7□□□□□ -0.7
HMBOX1-212ENST00000558662 DHRS4-AS1Q9P1J3 65 aa10.7□□□□□ -0.7
HMBOX1-212ENST00000558662 DOPEY1Q5JWR5 2465 aa10.69□□□□□ -0.7
HMBOX1-212ENST00000558662 Q8NBF4 154 aa10.68□□□□□ -0.7
HMBOX1-212ENST00000558662 Q9BRP9 147 aa10.68□□□□□ -0.7
HMBOX1-212ENST00000558662 ASH1LQ9NR48 2969 aaKnown RBP10.68□□□□□ -0.7
HMBOX1-212ENST00000558662 MP68P56378 58 aa10.67□□□□□ -0.7
HMBOX1-212ENST00000558662 KCNQ1DNQ9H478 68 aa10.67□□□□□ -0.7
HMBOX1-212ENST00000558662 XAGE1AQ9HD64 81 aa10.67□□□□□ -0.7
HMBOX1-212ENST00000558662 Q5VV11 94 aa10.67□□□□□ -0.7
HMBOX1-212ENST00000558662 ZFYVE26Q68DK2 2539 aa10.66□□□□□ -0.7
HMBOX1-212ENST00000558662 ATP11AUNQ6ZP68 121 aa10.66□□□□□ -0.7
HMBOX1-212ENST00000558662 Q8N377 158 aa10.66□□□□□ -0.7
HMBOX1-212ENST00000558662 B9D2Q9BPU9 175 aa10.66□□□□□ -0.7
HMBOX1-212ENST00000558662 LINC00588Q9Y4M8 146 aa10.66□□□□□ -0.7
HMBOX1-212ENST00000558662 EPG5Q9HCE0 2579 aa10.66□□□□□ -0.7
HMBOX1-212ENST00000558662 KMT2BQ9UMN6 2715 aaPredicted RBP10.65□□□□□ -0.7
HMBOX1-212ENST00000558662 A8MUN3 132 aa10.65□□□□□ -0.7
HMBOX1-212ENST00000558662 HCG22E2RYF7 251 aa10.65□□□□□ -0.7
HMBOX1-212ENST00000558662 NOTCH3Q9UM47 2321 aa10.65□□□□□ -0.7
HMBOX1-212ENST00000558662 LRCOL1A6NCL2 159 aa10.65□□□□□ -0.71
HMBOX1-212ENST00000558662 UBR5O95071 2799 aaPredicted RBP10.64□□□□□ -0.71
HMBOX1-212ENST00000558662 CELSR1Q9NYQ6 3014 aa10.64□□□□□ -0.71
HMBOX1-212ENST00000558662 TNP2Q05952 138 aa10.64□□□□□ -0.71
HMBOX1-212ENST00000558662 WFDC10AQ9H1F0 79 aa10.64□□□□□ -0.71
HMBOX1-212ENST00000558662 ZNF462Q96JM2 2506 aa10.63□□□□□ -0.71
HMBOX1-212ENST00000558662 A0A096LPF7 62 aa10.63□□□□□ -0.71
HMBOX1-212ENST00000558662 DSCR10P59022 87 aa10.63□□□□□ -0.71
HMBOX1-212ENST00000558662 X6R8D5 127 aa10.63□□□□□ -0.71
HMBOX1-212ENST00000558662 USP9XQ93008 2570 aaPredicted RBP10.63□□□□□ -0.71
HMBOX1-212ENST00000558662 A0A1W2PNM2 257 aa10.62□□□□□ -0.71
HMBOX1-212ENST00000558662 CAMK2N2Q96S95 79 aa10.62□□□□□ -0.71
HMBOX1-212ENST00000558662 C1orf137Q5JT78 98 aa10.62□□□□□ -0.71
HMBOX1-212ENST00000558662 PHF5AQ7RTV0 110 aaKnown RBP10.61□□□□□ -0.71
HMBOX1-212ENST00000558662 ZFHX3Q15911 3703 aa10.6□□□□□ -0.71
HMBOX1-212ENST00000558662 Q75L30 129 aa10.6□□□□□ -0.71
HMBOX1-212ENST00000558662 Q8N9P0 234 aaPredicted RBP10.6□□□□□ -0.71
HMBOX1-212ENST00000558662 FLNCQ14315 2725 aa10.59□□□□□ -0.71
HMBOX1-212ENST00000558662 LINC00208Q96KT6 92 aa10.59□□□□□ -0.71
HMBOX1-212ENST00000558662 RETNQ9HD89 108 aa10.59□□□□□ -0.71
HMBOX1-212ENST00000558662 SVEP1Q4LDE5 3571 aa10.58□□□□□ -0.72
HMBOX1-212ENST00000558662 LOC101927531A0A1B0GV80 90 aa10.57□□□□□ -0.72
HMBOX1-212ENST00000558662 CHKB-CPT1BH3BT56 60 aa10.57□□□□□ -0.72
HMBOX1-212ENST00000558662 PLA2G2DQ9UNK4 145 aa10.57□□□□□ -0.72
HMBOX1-212ENST00000558662 K7EQZ3 153 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms