RNA–Protein interactions for RNA: ENST00000558609.1

CSHL1-208, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 3

Gene CSHL1, Length 1,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-208ENST00000558609 SPINK8P0C7L1 97 aa9.41□□□□□ -0.9
CSHL1-208ENST00000558609 C12orf57Q99622 126 aa9.41□□□□□ -0.9
CSHL1-208ENST00000558609 C22orf24Q9Y442 160 aa9.41□□□□□ -0.9
CSHL1-208ENST00000558609 H0Y9J4 135 aa9.4□□□□□ -0.9
CSHL1-208ENST00000558609 H3BRM9 83 aa9.4□□□□□ -0.9
CSHL1-208ENST00000558609 IGLC3P0DOY3 106 aa9.4□□□□□ -0.9
CSHL1-208ENST00000558609 LBHQ53QV2 105 aaPredicted RBP9.39□□□□□ -0.91
CSHL1-208ENST00000558609 LINC00518Q8N0U6 118 aa9.39□□□□□ -0.91
CSHL1-208ENST00000558609 TP73-AS1Q9UF72 201 aa9.39□□□□□ -0.91
CSHL1-208ENST00000558609 PMCHL2Q9BQD1 86 aa9.38□□□□□ -0.91
CSHL1-208ENST00000558609 CHTOPQ9Y3Y2 248 aaKnown RBP9.38□□□□□ -0.91
CSHL1-208ENST00000558609 TRAV12-1A0A0B4J245 112 aa9.37□□□□□ -0.91
CSHL1-208ENST00000558609 IGLV5-39A0A0G2JS06 123 aa9.37□□□□□ -0.91
CSHL1-208ENST00000558609 HSBP1L1C9JCN9 74 aa9.37□□□□□ -0.91
CSHL1-208ENST00000558609 LINC01545Q5VT33 79 aa9.37□□□□□ -0.91
CSHL1-208ENST00000558609 ATOH7Q8N100 152 aa9.37□□□□□ -0.91
CSHL1-208ENST00000558609 ZNF22P17026 224 aaPredicted RBP9.36□□□□□ -0.91
CSHL1-208ENST00000558609 MRPL55Q7Z7F7 128 aaKnown RBP9.36□□□□□ -0.91
CSHL1-208ENST00000558609 VAMP8Q9BV40 100 aa9.36□□□□□ -0.91
CSHL1-208ENST00000558609 DPM2O94777 84 aa9.35□□□□□ -0.91
CSHL1-208ENST00000558609 IGKCP01834 107 aa9.35□□□□□ -0.91
CSHL1-208ENST00000558609 ZNF861PO60384 105 aa9.34□□□□□ -0.91
CSHL1-208ENST00000558609 PRR26Q8N8Z3 221 aa9.34□□□□□ -0.91
CSHL1-208ENST00000558609 KRTAP1-4P0C5Y4 121 aa9.33□□□□□ -0.92
CSHL1-208ENST00000558609 PLNP26678 52 aa9.33□□□□□ -0.92
CSHL1-208ENST00000558609 IGLV1-50A0A075B6I6 118 aa9.32□□□□□ -0.92
CSHL1-208ENST00000558609 IGLV5-37A0A075B6J1 123 aa9.32□□□□□ -0.92
CSHL1-208ENST00000558609 C11orf86A6NJI1 115 aa9.32□□□□□ -0.92
CSHL1-208ENST00000558609 LINC00167Q96N53 147 aa9.32□□□□□ -0.92
CSHL1-208ENST00000558609 PAM16Q9Y3D7 125 aa9.32□□□□□ -0.92
CSHL1-208ENST00000558609 SPATA45Q537H7 98 aa9.3□□□□□ -0.92
CSHL1-208ENST00000558609 BCE1O60756 84 aa9.29□□□□□ -0.92
CSHL1-208ENST00000558609 PFN2P35080 140 aa9.29□□□□□ -0.92
CSHL1-208ENST00000558609 COX17Q14061 63 aa9.29□□□□□ -0.92
CSHL1-208ENST00000558609 TMEM170BQ5T4T1 132 aa9.29□□□□□ -0.92
CSHL1-208ENST00000558609 ERG28Q9UKR5 140 aa9.29□□□□□ -0.92
CSHL1-208ENST00000558609 RPL37AP8A6NKH3 93 aa9.28□□□□□ -0.92
CSHL1-208ENST00000558609 HERVK_113P61574 105 aa9.28□□□□□ -0.92
CSHL1-208ENST00000558609 SFTA2Q6UW10 78 aa9.28□□□□□ -0.92
CSHL1-208ENST00000558609 NKAPP1Q8N9T2 125 aa9.28□□□□□ -0.92
CSHL1-208ENST00000558609 GAGE10A6NGK3 116 aa9.27□□□□□ -0.93
CSHL1-208ENST00000558609 TSTD3H0UI37 97 aa9.27□□□□□ -0.93
CSHL1-208ENST00000558609 RPL28P46779 137 aaKnown RBP9.27□□□□□ -0.93
CSHL1-208ENST00000558609 PRO1933Q9H354 126 aa9.27□□□□□ -0.93
CSHL1-208ENST00000558609 RPL13AP40429 203 aaKnown RBP9.26□□□□□ -0.93
CSHL1-208ENST00000558609 ZNF625Q96I27 306 aaPredicted RBP9.26□□□□□ -0.93
CSHL1-208ENST00000558609 SND1-IT1Q9HBX3 110 aa9.26□□□□□ -0.93
CSHL1-208ENST00000558609 TMEM223A0PJW6 202 aa9.25□□□□□ -0.93
CSHL1-208ENST00000558609 PCP4L1A6NKN8 68 aa9.25□□□□□ -0.93
CSHL1-208ENST00000558609 VPREB1P12018 145 aa9.24□□□□□ -0.93
CSHL1-208ENST00000558609 NMUP48645 174 aa9.24□□□□□ -0.93
CSHL1-208ENST00000558609 RPL24P83731 157 aaKnown RBP9.23□□□□□ -0.93
CSHL1-208ENST00000558609 ANKRD39Q53RE8 183 aa9.22□□□□□ -0.93
CSHL1-208ENST00000558609 KRTAP13-1Q8IUC0 172 aa9.22□□□□□ -0.93
CSHL1-208ENST00000558609 C14orf144Q96I85 54 aa9.22□□□□□ -0.93
CSHL1-208ENST00000558609 IGKV2-28A0A075B6P5 120 aa9.21□□□□□ -0.94
CSHL1-208ENST00000558609 IGKV2D-28P01615 120 aa9.21□□□□□ -0.94
CSHL1-208ENST00000558609 UBE2AP49459 152 aa9.2□□□□□ -0.94
CSHL1-208ENST00000558609 UQCR10Q9UDW1 63 aa9.2□□□□□ -0.94
CSHL1-208ENST00000558609 LPAP08519 4548 aa9.19□□□□□ -0.94
CSHL1-208ENST00000558609 LGALS3P17931 250 aaKnown RBP9.19□□□□□ -0.94
CSHL1-208ENST00000558609 LINC00158P58513 81 aa9.19□□□□□ -0.94
CSHL1-208ENST00000558609 SLC25A34Q6PIV7 304 aa9.19□□□□□ -0.94
CSHL1-208ENST00000558609 Q8NDZ9 215 aa9.19□□□□□ -0.94
CSHL1-208ENST00000558609 E9PLD3 99 aa9.18□□□□□ -0.94
CSHL1-208ENST00000558609 MIEN1Q9BRT3 115 aa9.18□□□□□ -0.94
CSHL1-208ENST00000558609 A0A087X002 238 aa9.17□□□□□ -0.94
CSHL1-208ENST00000558609 LEPROTO15243 131 aa9.17□□□□□ -0.94
CSHL1-208ENST00000558609 COX8AP10176 69 aa9.17□□□□□ -0.94
CSHL1-208ENST00000558609 PLEKHB2Q96CS7 222 aa9.17□□□□□ -0.94
CSHL1-208ENST00000558609 TMEM126AQ9H061 195 aa9.17□□□□□ -0.94
CSHL1-208ENST00000558609 CRYGAP11844 174 aa9.16□□□□□ -0.94
CSHL1-208ENST00000558609 HERV-K104P63124 156 aa9.16□□□□□ -0.94
CSHL1-208ENST00000558609 IGKV2D-26A0A0A0MRZ7 120 aa9.15□□□□□ -0.94
CSHL1-208ENST00000558609 A0A0U1RRA0 63 aa9.15□□□□□ -0.94
CSHL1-208ENST00000558609 TMEM238C9JI98 176 aa9.15□□□□□ -0.94
CSHL1-208ENST00000558609 M0R378 163 aa9.15□□□□□ -0.94
CSHL1-208ENST00000558609 SMIM13P0DJ93 91 aa9.15□□□□□ -0.94
CSHL1-208ENST00000558609 J3QQQ9 107 aa9.14□□□□□ -0.95
CSHL1-208ENST00000558609 DDTP30046 118 aa9.14□□□□□ -0.95
CSHL1-208ENST00000558609 PCP2Q8IVA1 136 aa9.14□□□□□ -0.95
CSHL1-208ENST00000558609 NDUFA12Q9UI09 145 aa9.14□□□□□ -0.95
CSHL1-208ENST00000558609 ZNF815PA8K554 130 aa9.13□□□□□ -0.95
CSHL1-208ENST00000558609 LINC00587B1AMM8 73 aa9.13□□□□□ -0.95
CSHL1-208ENST00000558609 PRLHP81277 87 aa9.13□□□□□ -0.95
CSHL1-208ENST00000558609 FAM19A1Q7Z5A9 133 aa9.13□□□□□ -0.95
CSHL1-208ENST00000558609 TYMSOSQ8TAI1 123 aa9.13□□□□□ -0.95
CSHL1-208ENST00000558609 ANAPC11Q9NYG5 84 aa9.13□□□□□ -0.95
CSHL1-208ENST00000558609 MYMXA0A1B0GTQ4 84 aa9.12□□□□□ -0.95
CSHL1-208ENST00000558609 DLEU1O43261 78 aa9.12□□□□□ -0.95
CSHL1-208ENST00000558609 FAM229BQ4G0N7 80 aa9.12□□□□□ -0.95
CSHL1-208ENST00000558609 MEIG1Q5JSS6 88 aa9.12□□□□□ -0.95
CSHL1-208ENST00000558609 SCGB1D4Q6XE38 83 aa9.12□□□□□ -0.95
CSHL1-208ENST00000558609 BOD1L2Q8IYS8 172 aa9.12□□□□□ -0.95
CSHL1-208ENST00000558609 MIR7-3HGQ8N6C7 128 aa9.11□□□□□ -0.95
CSHL1-208ENST00000558609 TTTY13Q9BZ97 58 aa9.11□□□□□ -0.95
CSHL1-208ENST00000558609 KRTAP13-2Q52LG2 175 aa9.1□□□□□ -0.95
CSHL1-208ENST00000558609 MUC2Q02817 5179 aa9.09□□□□□ -0.95
CSHL1-208ENST00000558609 TSPEAR-AS2P59090 65 aa9.09□□□□□ -0.95
CSHL1-208ENST00000558609 TSPAN13O95857 204 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms