RNA–Protein interactions for RNA: ENST00000558543.5

PDE8A-209, Transcript of phosphodiesterase 8A, humanhuman

TSL 3

Gene PDE8A, Length 644 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8A-209ENST00000558543 TRGV4A0A0C4DH28 118 aa2.27□□□□□ -2.05
PDE8A-209ENST00000558543 ETDCA0A1B0GVM5 59 aa2.27□□□□□ -2.05
PDE8A-209ENST00000558543 CCL18P55774 89 aa2.27□□□□□ -2.05
PDE8A-209ENST00000558543 DEFB112Q30KQ8 113 aa2.27□□□□□ -2.05
PDE8A-209ENST00000558543 KRTAP5-7Q6L8G8 165 aa2.27□□□□□ -2.05
PDE8A-209ENST00000558543 KRTAP26-1Q6PEX3 210 aa2.27□□□□□ -2.05
PDE8A-209ENST00000558543 SPATA8Q6RVD6 105 aa2.27□□□□□ -2.05
PDE8A-209ENST00000558543 PSORS1C2Q9UIG4 136 aa2.27□□□□□ -2.05
PDE8A-209ENST00000558543 CUL9Q8IWT3 2517 aa2.27□□□□□ -2.05
PDE8A-209ENST00000558543 CR1P17927 2039 aa2.27□□□□□ -2.05
PDE8A-209ENST00000558543 MALRD1Q5VYJ5 2156 aa2.26□□□□□ -2.05
PDE8A-209ENST00000558543 ZNF831Q5JPB2 1677 aa2.26□□□□□ -2.05
PDE8A-209ENST00000558543 NCR3O14931 201 aa2.26□□□□□ -2.05
PDE8A-209ENST00000558543 RNASE3P12724 160 aaKnown RBP2.26□□□□□ -2.05
PDE8A-209ENST00000558543 CCL3L1P16619 93 aa2.26□□□□□ -2.05
PDE8A-209ENST00000558543 HCP5Q6MZN7 132 aa2.26□□□□□ -2.05
PDE8A-209ENST00000558543 TNCP24821 2201 aa2.25□□□□□ -2.05
PDE8A-209ENST00000558543 MED12Q93074 2177 aa2.25□□□□□ -2.05
PDE8A-209ENST00000558543 IGKV3-7A0A075B6H7 116 aa2.25□□□□□ -2.05
PDE8A-209ENST00000558543 H3BSH0 61 aa2.25□□□□□ -2.05
PDE8A-209ENST00000558543 SPINK7P58062 85 aa2.25□□□□□ -2.05
PDE8A-209ENST00000558543 COX17Q14061 63 aa2.25□□□□□ -2.05
PDE8A-209ENST00000558543 TRGV2A0A075B6R0 118 aa2.24□□□□□ -2.05
PDE8A-209ENST00000558543 IGKV4-1P06312 121 aa2.24□□□□□ -2.05
PDE8A-209ENST00000558543 LINC00308Q8TCZ7 52 aa2.24□□□□□ -2.05
PDE8A-209ENST00000558543 MRPL33O75394 65 aaKnown RBP2.23□□□□□ -2.05
PDE8A-209ENST00000558543 COA5Q86WW8 74 aa2.23□□□□□ -2.05
PDE8A-209ENST00000558543 SPRR4Q96PI1 79 aa2.23□□□□□ -2.05
PDE8A-209ENST00000558543 KCNQ1DNQ9H478 68 aa2.23□□□□□ -2.05
PDE8A-209ENST00000558543 ALPK2Q86TB3 2170 aa2.23□□□□□ -2.05
PDE8A-209ENST00000558543 CEP192Q8TEP8 1941 aa2.23□□□□□ -2.05
PDE8A-209ENST00000558543 NDUFA1O15239 70 aa2.22□□□□□ -2.05
PDE8A-209ENST00000558543 C9orf163Q8N9P6 203 aa2.22□□□□□ -2.05
PDE8A-209ENST00000558543 SSC5DA1L4H1 1573 aa2.2□□□□□ -2.06
PDE8A-209ENST00000558543 IGKV3OR2-268A0A0C4DH90 116 aa2.2□□□□□ -2.06
PDE8A-209ENST00000558543 IGKV2-29A2NJV5 120 aaPredicted RBP2.2□□□□□ -2.06
PDE8A-209ENST00000558543 DEFB106AQ8N104 65 aa2.2□□□□□ -2.06
PDE8A-209ENST00000558543 ABCA4P78363 2273 aa2.2□□□□□ -2.06
PDE8A-209ENST00000558543 SDK1Q7Z5N4 2213 aa2.19□□□□□ -2.06
PDE8A-209ENST00000558543 A0A1B0GU69 56 aa2.19□□□□□ -2.06
PDE8A-209ENST00000558543 CCL22O00626 93 aa2.19□□□□□ -2.06
PDE8A-209ENST00000558543 COX7BP24311 80 aa2.19□□□□□ -2.06
PDE8A-209ENST00000558543 PATE1Q8WXA2 126 aa2.19□□□□□ -2.06
PDE8A-209ENST00000558543 RP1P56715 2156 aa2.18□□□□□ -2.06
PDE8A-209ENST00000558543 IGKV2-40A0A087WW87 121 aaPredicted RBP2.18□□□□□ -2.06
PDE8A-209ENST00000558543 TRGV1A0A0A0MS02 117 aa2.18□□□□□ -2.06
PDE8A-209ENST00000558543 LINC00959A0A1B0GUT2 108 aa2.18□□□□□ -2.06
PDE8A-209ENST00000558543 IGKV2D-40P01614 121 aaPredicted RBP2.18□□□□□ -2.06
PDE8A-209ENST00000558543 Q6ZTI0 123 aa2.18□□□□□ -2.06
PDE8A-209ENST00000558543 SMIM11BQ8TCY0 68 aa2.18□□□□□ -2.06
PDE8A-209ENST00000558543 CCL26Q9Y258 94 aa2.18□□□□□ -2.06
PDE8A-209ENST00000558543 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.17□□□□□ -2.06
PDE8A-209ENST00000558543 TRBV6-4A0A1B0GX49 114 aa2.17□□□□□ -2.06
PDE8A-209ENST00000558543 IGLV3-1P01715 115 aa2.17□□□□□ -2.06
PDE8A-209ENST00000558543 RPS27P42677 84 aaKnown RBP2.17□□□□□ -2.06
PDE8A-209ENST00000558543 CRIP1P50238 77 aa2.17□□□□□ -2.06
PDE8A-209ENST00000558543 LINC00158P58513 81 aa2.17□□□□□ -2.06
PDE8A-209ENST00000558543 BRD3OSQ6XYD6 125 aa2.17□□□□□ -2.06
PDE8A-209ENST00000558543 TRIOBPQ9H2D6 2365 aa2.17□□□□□ -2.06
PDE8A-209ENST00000558543 PDE4DIPQ5VU43 2346 aa2.17□□□□□ -2.06
PDE8A-209ENST00000558543 TNRC6CQ9HCJ0 1690 aaKnown RBP2.16□□□□□ -2.06
PDE8A-209ENST00000558543 PIGYQ3MUY2 71 aa2.16□□□□□ -2.06
PDE8A-209ENST00000558543 DEFB131BA0A096LNP1 70 aa2.15□□□□□ -2.07
PDE8A-209ENST00000558543 PRCDQ00LT1 54 aa2.15□□□□□ -2.07
PDE8A-209ENST00000558543 Q6ZQY7 126 aa2.15□□□□□ -2.07
PDE8A-209ENST00000558543 DEFB132Q7Z7B7 95 aa2.15□□□□□ -2.07
PDE8A-209ENST00000558543 UNC13CQ8NB66 2214 aa2.15□□□□□ -2.07
PDE8A-209ENST00000558543 A0A087WTM6 91 aa2.14□□□□□ -2.07
PDE8A-209ENST00000558543 POLR2KP53803 58 aaKnown RBP2.14□□□□□ -2.07
PDE8A-209ENST00000558543 RPL37AP61513 92 aaKnown RBP2.14□□□□□ -2.07
PDE8A-209ENST00000558543 SPINK9Q5DT21 86 aa2.14□□□□□ -2.07
PDE8A-209ENST00000558543 PRB1P04280 392 aa2.13□□□□□ -2.07
PDE8A-209ENST00000558543 ACYP2P14621 99 aa2.13□□□□□ -2.07
PDE8A-209ENST00000558543 LINC00472Q9H8W2 130 aa2.13□□□□□ -2.07
PDE8A-209ENST00000558543 PRO2289Q9P1D8 64 aa2.13□□□□□ -2.07
PDE8A-209ENST00000558543 CACNA1CQ13936 2221 aa2.13□□□□□ -2.07
PDE8A-209ENST00000558543 NBDYA0A0U1RRE5 68 aa2.12□□□□□ -2.07
PDE8A-209ENST00000558543 LINC00575Q6W349 94 aa2.11□□□□□ -2.07
PDE8A-209ENST00000558543 Q8IZM0 81 aa2.11□□□□□ -2.07
PDE8A-209ENST00000558543 C5orf56Q8N8D9 126 aa2.11□□□□□ -2.07
PDE8A-209ENST00000558543 Q96NJ1 140 aa2.11□□□□□ -2.07
PDE8A-209ENST00000558543 ZFHX3Q15911 3703 aa2.11□□□□□ -2.07
PDE8A-209ENST00000558543 CADP27708 2225 aa2.1□□□□□ -2.07
PDE8A-209ENST00000558543 RPL39P62891 51 aaKnown RBP2.1□□□□□ -2.07
PDE8A-209ENST00000558543 RPL39LQ96EH5 51 aaKnown RBP2.1□□□□□ -2.07
PDE8A-209ENST00000558543 MED13LQ71F56 2210 aa2.1□□□□□ -2.07
PDE8A-209ENST00000558543 A0A0G2JQZ4 141 aa2.09□□□□□ -2.07
PDE8A-209ENST00000558543 SPTY2D1-AS1A0A0U1RR47 76 aa2.09□□□□□ -2.07
PDE8A-209ENST00000558543 PRB3Q04118 309 aaPredicted RBP2.09□□□□□ -2.07
PDE8A-209ENST00000558543 CCL19Q99731 98 aa2.09□□□□□ -2.07
PDE8A-209ENST00000558543 CDKN2A-AS1Q9UH64 79 aa2.09□□□□□ -2.07
PDE8A-209ENST00000558543 ANKRD17O75179 2603 aaKnown RBP2.09□□□□□ -2.08
PDE8A-209ENST00000558543 ZFHX2Q9C0A1 2572 aaPredicted RBP2.08□□□□□ -2.08
PDE8A-209ENST00000558543 KMT2BQ9UMN6 2715 aaPredicted RBP2.08□□□□□ -2.08
PDE8A-209ENST00000558543 F5P12259 2224 aa2.08□□□□□ -2.08
PDE8A-209ENST00000558543 SORL1Q92673 2214 aa2.08□□□□□ -2.08
PDE8A-209ENST00000558543 H3BRN7 92 aa2.08□□□□□ -2.08
PDE8A-209ENST00000558543 ANGP03950 147 aaKnown RBP2.08□□□□□ -2.08
PDE8A-209ENST00000558543 SSBP3-AS1Q7Z2R9 100 aa2.08□□□□□ -2.08
PDE8A-209ENST00000558543 TP53AIP1Q9HCN2 124 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms