RNA–Protein interactions for RNA: ENST00000558500.5

LRRC28-207, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-207ENST00000558500 SLC25A20O43772 301 aa3.67□□□□□ -1.82
LRRC28-207ENST00000558500 NPYP01303 97 aa3.67□□□□□ -1.82
LRRC28-207ENST00000558500 RAB5AP20339 215 aa3.67□□□□□ -1.82
LRRC28-207ENST00000558500 C2orf66Q6UXQ4 117 aa3.67□□□□□ -1.82
LRRC28-207ENST00000558500 AMELXQ99217 191 aa3.67□□□□□ -1.82
LRRC28-207ENST00000558500 OSTCQ9NRP0 149 aa3.67□□□□□ -1.82
LRRC28-207ENST00000558500 CDKN2A-AS1Q9UH64 79 aa3.67□□□□□ -1.82
LRRC28-207ENST00000558500 ZNF706Q9Y5V0 76 aaPredicted RBP3.67□□□□□ -1.82
LRRC28-207ENST00000558500 D6R8Y8 96 aa3.66□□□□□ -1.82
LRRC28-207ENST00000558500 RAB5BP61020 215 aa3.66□□□□□ -1.82
LRRC28-207ENST00000558500 HERVK_113P63121 156 aa3.66□□□□□ -1.82
LRRC28-207ENST00000558500 LINC01551Q86U37 167 aa3.66□□□□□ -1.82
LRRC28-207ENST00000558500 VCX2Q9H322 139 aa3.66□□□□□ -1.82
LRRC28-207ENST00000558500 NAT8BQ9UHF3 227 aa3.66□□□□□ -1.82
LRRC28-207ENST00000558500 V9GYV3 84 aa3.66□□□□□ -1.82
LRRC28-207ENST00000558500 CEBPGP53567 150 aa3.65□□□□□ -1.83
LRRC28-207ENST00000558500 COX6B2Q6YFQ2 88 aa3.65□□□□□ -1.83
LRRC28-207ENST00000558500 GEMIN7Q9H840 131 aaKnown RBP3.65□□□□□ -1.83
LRRC28-207ENST00000558500 MACF1Q9UPN3 7388 aaKnown RBP3.64□□□□□ -1.83
LRRC28-207ENST00000558500 A0A1B0GW15 77 aa3.64□□□□□ -1.83
LRRC28-207ENST00000558500 SMIM1B2RUZ4 78 aa3.64□□□□□ -1.83
LRRC28-207ENST00000558500 PPBPP02775 128 aa3.64□□□□□ -1.83
LRRC28-207ENST00000558500 SEC11AP67812 179 aa3.64□□□□□ -1.83
LRRC28-207ENST00000558500 FAM74A3Q4VXF1 159 aa3.64□□□□□ -1.83
LRRC28-207ENST00000558500 COX7B2Q8TF08 81 aa3.64□□□□□ -1.83
LRRC28-207ENST00000558500 SMIM7Q9BQ49 75 aa3.64□□□□□ -1.83
LRRC28-207ENST00000558500 CYSLTR1Q9Y271 337 aa3.64□□□□□ -1.83
LRRC28-207ENST00000558500 IGLV5-45A0A087WSX0 123 aa3.63□□□□□ -1.83
LRRC28-207ENST00000558500 KRTAP4-16G5E9R7 235 aaPredicted RBP3.63□□□□□ -1.83
LRRC28-207ENST00000558500 PDZD11Q5EBL8 140 aa3.63□□□□□ -1.83
LRRC28-207ENST00000558500 IGIPA6NJ69 53 aa3.62□□□□□ -1.83
LRRC28-207ENST00000558500 MOBPQ13875 183 aa3.62□□□□□ -1.83
LRRC28-207ENST00000558500 LINC00483Q53H64 154 aa3.62□□□□□ -1.83
LRRC28-207ENST00000558500 TMEM136Q6ZRR5 245 aa3.62□□□□□ -1.83
LRRC28-207ENST00000558500 SSBP3-AS1Q7Z2R9 100 aa3.62□□□□□ -1.83
LRRC28-207ENST00000558500 ORMDL3Q8N138 153 aa3.62□□□□□ -1.83
LRRC28-207ENST00000558500 PRELID3AQ96N28 172 aa3.62□□□□□ -1.83
LRRC28-207ENST00000558500 IGLV9-49A0A0B4J1Y8 123 aa3.61□□□□□ -1.83
LRRC28-207ENST00000558500 LOC389332A0A1B0GUA5 103 aa3.61□□□□□ -1.83
LRRC28-207ENST00000558500 SMIM27A0A1W2PRY6 76 aa3.61□□□□□ -1.83
LRRC28-207ENST00000558500 F8W036 122 aa3.61□□□□□ -1.83
LRRC28-207ENST00000558500 S100A8P05109 93 aa3.61□□□□□ -1.83
LRRC28-207ENST00000558500 CFC1P0CG37 223 aa3.61□□□□□ -1.83
LRRC28-207ENST00000558500 PFN2P35080 140 aa3.61□□□□□ -1.83
LRRC28-207ENST00000558500 MRPL54Q6P161 138 aaKnown RBP3.61□□□□□ -1.83
LRRC28-207ENST00000558500 Q8NDZ9 215 aa3.61□□□□□ -1.83
LRRC28-207ENST00000558500 SMCR5Q8TEV8 140 aa3.61□□□□□ -1.83
LRRC28-207ENST00000558500 SND1-IT1Q9HBX3 110 aa3.61□□□□□ -1.83
LRRC28-207ENST00000558500 A0A1B0GXF2 115 aa3.6□□□□□ -1.83
LRRC28-207ENST00000558500 C9orf92A6NGG3 77 aa3.6□□□□□ -1.83
LRRC28-207ENST00000558500 ATP5LO75964 103 aa3.6□□□□□ -1.83
LRRC28-207ENST00000558500 RAB14P61106 215 aa3.6□□□□□ -1.83
LRRC28-207ENST00000558500 ORMDL2Q53FV1 153 aa3.6□□□□□ -1.83
LRRC28-207ENST00000558500 AKAP14Q86UN6 197 aa3.6□□□□□ -1.83
LRRC28-207ENST00000558500 BATF3Q9NR55 127 aa3.6□□□□□ -1.83
LRRC28-207ENST00000558500 A0A0U1RRA0 63 aa3.59□□□□□ -1.83
LRRC28-207ENST00000558500 TINCRA0A1B0GVN0 87 aa3.59□□□□□ -1.83
LRRC28-207ENST00000558500 SPINK8P0C7L1 97 aa3.59□□□□□ -1.83
LRRC28-207ENST00000558500 SLC51BQ86UW2 128 aa3.59□□□□□ -1.83
LRRC28-207ENST00000558500 Q8N8P6 123 aa3.59□□□□□ -1.83
LRRC28-207ENST00000558500 TIMM17AQ99595 171 aa3.59□□□□□ -1.83
LRRC28-207ENST00000558500 MAP1LC3AQ9H492 121 aa3.59□□□□□ -1.83
LRRC28-207ENST00000558500 ATP6V1G1O75348 118 aa3.58□□□□□ -1.84
LRRC28-207ENST00000558500 RPL23P62829 140 aaKnown RBP3.58□□□□□ -1.84
LRRC28-207ENST00000558500 KRTAP9-8Q9BYQ0 159 aa3.58□□□□□ -1.84
LRRC28-207ENST00000558500 ERG28Q9UKR5 140 aa3.58□□□□□ -1.84
LRRC28-207ENST00000558500 LAMTOR2Q9Y2Q5 125 aa3.58□□□□□ -1.84
LRRC28-207ENST00000558500 K7EMI3 77 aa3.57□□□□□ -1.84
LRRC28-207ENST00000558500 SRP19P09132 144 aaKnown RBP3.57□□□□□ -1.84
LRRC28-207ENST00000558500 SPRR1AP35321 89 aa3.57□□□□□ -1.84
LRRC28-207ENST00000558500 COX17Q14061 63 aa3.57□□□□□ -1.84
LRRC28-207ENST00000558500 ADIRFQ15847 76 aa3.57□□□□□ -1.84
LRRC28-207ENST00000558500 ETDCA0A1B0GVM5 59 aa3.56□□□□□ -1.84
LRRC28-207ENST00000558500 IGLV6-57P01721 117 aa3.56□□□□□ -1.84
LRRC28-207ENST00000558500 HERV-K104P63124 156 aa3.56□□□□□ -1.84
LRRC28-207ENST00000558500 RGS21Q2M5E4 152 aa3.56□□□□□ -1.84
LRRC28-207ENST00000558500 TOMM6Q96B49 74 aa3.56□□□□□ -1.84
LRRC28-207ENST00000558500 H3BRM9 83 aa3.55□□□□□ -1.84
LRRC28-207ENST00000558500 ERC2-IT1O76042 136 aa3.55□□□□□ -1.84
LRRC28-207ENST00000558500 G0S2P27469 103 aa3.55□□□□□ -1.84
LRRC28-207ENST00000558500 RPL37P61927 97 aaKnown RBP3.55□□□□□ -1.84
LRRC28-207ENST00000558500 ERASQ7Z444 233 aa3.55□□□□□ -1.84
LRRC28-207ENST00000558500 ATP5L2Q7Z4Y8 100 aa3.55□□□□□ -1.84
LRRC28-207ENST00000558500 ZNF625Q96I27 306 aaPredicted RBP3.55□□□□□ -1.84
LRRC28-207ENST00000558500 KCNQ1DNQ9H478 68 aa3.55□□□□□ -1.84
LRRC28-207ENST00000558500 ADCYAP1P18509 176 aa3.54□□□□□ -1.84
LRRC28-207ENST00000558500 C9orf153Q5TBE3 101 aa3.54□□□□□ -1.84
LRRC28-207ENST00000558500 ALKAL2Q6UX46 152 aa3.54□□□□□ -1.84
LRRC28-207ENST00000558500 SCGB3A1Q96QR1 104 aa3.54□□□□□ -1.84
LRRC28-207ENST00000558500 LIMD2Q9BT23 127 aa3.54□□□□□ -1.84
LRRC28-207ENST00000558500 CST9LQ9H4G1 147 aa3.54□□□□□ -1.84
LRRC28-207ENST00000558500 NXT2Q9NPJ8 142 aaKnown RBP3.54□□□□□ -1.84
LRRC28-207ENST00000558500 NAT8Q9UHE5 227 aa3.54□□□□□ -1.84
LRRC28-207ENST00000558500 Q6Q795 121 aa3.53□□□□□ -1.84
LRRC28-207ENST00000558500 NEBP20929 6669 aa3.52□□□□□ -1.85
LRRC28-207ENST00000558500 KRTAP5-3Q6L8H2 238 aa3.52□□□□□ -1.85
LRRC28-207ENST00000558500 Q9BRP9 147 aa3.52□□□□□ -1.85
LRRC28-207ENST00000558500 TRAV9-1A0A075B6T8 112 aa3.51□□□□□ -1.85
LRRC28-207ENST00000558500 TRBV10-3A0A0K0K1G6 114 aa3.51□□□□□ -1.85
LRRC28-207ENST00000558500 NCR3O14931 201 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms