RNA–Protein interactions for RNA: ENST00000558248.5

LRRC28-205, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 499 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-205ENST00000558248 MYOZ3Q8TDC0 251 aa2.36□□□□□ -2.03
LRRC28-205ENST00000558248 TMEM141Q96I45 108 aa2.36□□□□□ -2.03
LRRC28-205ENST00000558248 PRO1933Q9H354 126 aa2.36□□□□□ -2.03
LRRC28-205ENST00000558248 APLNQ9ULZ1 77 aa2.36□□□□□ -2.03
LRRC28-205ENST00000558248 LINC00312Q9Y6C7 94 aa2.36□□□□□ -2.03
LRRC28-205ENST00000558248 DYNC1H1Q14204 4646 aaKnown RBP2.36□□□□□ -2.03
LRRC28-205ENST00000558248 IGLV2-18A0A075B6J9 118 aa2.35□□□□□ -2.03
LRRC28-205ENST00000558248 TRAV12-1A0A0B4J245 112 aa2.35□□□□□ -2.03
LRRC28-205ENST00000558248 UBE2L5PA0A1B0GUS4 154 aa2.35□□□□□ -2.03
LRRC28-205ENST00000558248 ATP5EP56381 51 aaPredicted RBP2.35□□□□□ -2.03
LRRC28-205ENST00000558248 KRTAP10-8P60410 259 aa2.35□□□□□ -2.03
LRRC28-205ENST00000558248 UBE2L3P68036 154 aaKnown RBP2.35□□□□□ -2.03
LRRC28-205ENST00000558248 MIR22HGQ0VDD5 57 aa2.35□□□□□ -2.03
LRRC28-205ENST00000558248 Q6ZTI0 123 aa2.35□□□□□ -2.03
LRRC28-205ENST00000558248 WFDC10AQ9H1F0 79 aa2.35□□□□□ -2.03
LRRC28-205ENST00000558248 DNAH11Q96DT5 4516 aa2.35□□□□□ -2.03
LRRC28-205ENST00000558248 VPS13DQ5THJ4 4388 aa2.34□□□□□ -2.03
LRRC28-205ENST00000558248 IGKV2D-24A0A075B6R9 120 aa2.34□□□□□ -2.03
LRRC28-205ENST00000558248 A0A1W2PNM2 257 aa2.34□□□□□ -2.03
LRRC28-205ENST00000558248 CPSF4LA6NMK7 179 aaKnown RBP2.34□□□□□ -2.03
LRRC28-205ENST00000558248 FXYD1O00168 92 aa2.34□□□□□ -2.03
LRRC28-205ENST00000558248 MT-ATP8P03928 68 aa2.34□□□□□ -2.03
LRRC28-205ENST00000558248 ADCYAP1P18509 176 aa2.34□□□□□ -2.03
LRRC28-205ENST00000558248 SNCAP37840 140 aa2.34□□□□□ -2.03
LRRC28-205ENST00000558248 PYDC2Q56P42 97 aa2.34□□□□□ -2.03
LRRC28-205ENST00000558248 Q8N8P6 123 aa2.34□□□□□ -2.03
LRRC28-205ENST00000558248 C9orf163Q8N9P6 203 aa2.34□□□□□ -2.03
LRRC28-205ENST00000558248 DSCR8Q96T75 97 aa2.34□□□□□ -2.03
LRRC28-205ENST00000558248 PRO2289Q9P1D8 64 aa2.34□□□□□ -2.03
LRRC28-205ENST00000558248 NDUFA12Q9UI09 145 aa2.34□□□□□ -2.03
LRRC28-205ENST00000558248 PKD1P98161 4303 aa2.33□□□□□ -2.04
LRRC28-205ENST00000558248 G3V318 75 aa2.33□□□□□ -2.04
LRRC28-205ENST00000558248 GNGT2O14610 69 aa2.33□□□□□ -2.04
LRRC28-205ENST00000558248 IL7P13232 177 aa2.33□□□□□ -2.04
LRRC28-205ENST00000558248 HRES1P13985 223 aa2.33□□□□□ -2.04
LRRC28-205ENST00000558248 CBLN1P23435 193 aa2.33□□□□□ -2.04
LRRC28-205ENST00000558248 EDDM3BP56851 147 aa2.33□□□□□ -2.04
LRRC28-205ENST00000558248 Q0VG73 95 aa2.33□□□□□ -2.04
LRRC28-205ENST00000558248 RHOHQ15669 191 aa2.33□□□□□ -2.04
LRRC28-205ENST00000558248 Q5VSD8 79 aa2.33□□□□□ -2.04
LRRC28-205ENST00000558248 RPL7L1Q6DKI1 246 aaKnown RBP2.33□□□□□ -2.04
LRRC28-205ENST00000558248 OR10AG1Q8NH19 301 aa2.33□□□□□ -2.04
LRRC28-205ENST00000558248 CMTM2Q8TAZ6 248 aa2.33□□□□□ -2.04
LRRC28-205ENST00000558248 PPDPFLQ8WWR9 84 aa2.33□□□□□ -2.04
LRRC28-205ENST00000558248 FAT2Q9NYQ8 4349 aa2.33□□□□□ -2.04
LRRC28-205ENST00000558248 DNAH2Q9P225 4427 aa2.33□□□□□ -2.04
LRRC28-205ENST00000558248 DNAH17Q9UFH2 4485 aa2.32□□□□□ -2.04
LRRC28-205ENST00000558248 APOBP04114 4563 aaKnown RBP2.32□□□□□ -2.04
LRRC28-205ENST00000558248 RBAKDNA6NC62 111 aa2.32□□□□□ -2.04
LRRC28-205ENST00000558248 M0R135 149 aa2.32□□□□□ -2.04
LRRC28-205ENST00000558248 PRB4P10163 310 aaPredicted RBP2.32□□□□□ -2.04
LRRC28-205ENST00000558248 ASIPP42127 132 aa2.32□□□□□ -2.04
LRRC28-205ENST00000558248 LYPD1Q8N2G4 141 aa2.32□□□□□ -2.04
LRRC28-205ENST00000558248 C15orf53Q8NAA6 179 aa2.32□□□□□ -2.04
LRRC28-205ENST00000558248 NPVFQ9HCQ7 196 aa2.32□□□□□ -2.04
LRRC28-205ENST00000558248 F8W1H4 67 aa2.31□□□□□ -2.04
LRRC28-205ENST00000558248 CTSGP08311 255 aa2.31□□□□□ -2.04
LRRC28-205ENST00000558248 UBE2G1P62253 170 aa2.31□□□□□ -2.04
LRRC28-205ENST00000558248 Q1T7F1 81 aa2.31□□□□□ -2.04
LRRC28-205ENST00000558248 DEFB135Q30KP9 77 aa2.31□□□□□ -2.04
LRRC28-205ENST00000558248 C9orf116Q5BN46 136 aaPredicted RBP2.31□□□□□ -2.04
LRRC28-205ENST00000558248 MED9Q9NWA0 146 aa2.31□□□□□ -2.04
LRRC28-205ENST00000558248 MYCBP2O75592 4640 aa2.3□□□□□ -2.04
LRRC28-205ENST00000558248 SMR3BP02814 79 aaPredicted RBP2.3□□□□□ -2.04
LRRC28-205ENST00000558248 SMIM11AP58511 58 aa2.3□□□□□ -2.04
LRRC28-205ENST00000558248 KRTDAPP60985 99 aa2.3□□□□□ -2.04
LRRC28-205ENST00000558248 CNBPP62633 177 aaKnown RBP2.3□□□□□ -2.04
LRRC28-205ENST00000558248 RBM3P98179 157 aaKnown RBP2.3□□□□□ -2.04
LRRC28-205ENST00000558248 PDE6HQ13956 83 aa2.3□□□□□ -2.04
LRRC28-205ENST00000558248 INSL4Q14641 139 aa2.3□□□□□ -2.04
LRRC28-205ENST00000558248 ZNF833PQ6ZTB9 187 aa2.3□□□□□ -2.04
LRRC28-205ENST00000558248 Q8N6K4 173 aa2.3□□□□□ -2.04
LRRC28-205ENST00000558248 Q8TAT8 98 aa2.3□□□□□ -2.04
LRRC28-205ENST00000558248 IGKV2-28A0A075B6P5 120 aa2.29□□□□□ -2.04
LRRC28-205ENST00000558248 C2orf70A6NJV1 201 aa2.29□□□□□ -2.04
LRRC28-205ENST00000558248 DEFB4AO15263 64 aa2.29□□□□□ -2.04
LRRC28-205ENST00000558248 IGKV2D-28P01615 120 aa2.29□□□□□ -2.04
LRRC28-205ENST00000558248 IGHV3-33P01772 117 aa2.29□□□□□ -2.04
LRRC28-205ENST00000558248 CCKP06307 115 aa2.29□□□□□ -2.04
LRRC28-205ENST00000558248 SLC25A6P12236 298 aa2.29□□□□□ -2.04
LRRC28-205ENST00000558248 RPS27P42677 84 aaKnown RBP2.29□□□□□ -2.04
LRRC28-205ENST00000558248 ELOBQ15370 118 aa2.29□□□□□ -2.04
LRRC28-205ENST00000558248 S100A7L2Q5SY68 101 aa2.29□□□□□ -2.04
LRRC28-205ENST00000558248 KRTAP26-1Q6PEX3 210 aa2.29□□□□□ -2.04
LRRC28-205ENST00000558248 HEPN1Q6WQI6 88 aa2.29□□□□□ -2.04
LRRC28-205ENST00000558248 S100A13Q99584 98 aa2.29□□□□□ -2.04
LRRC28-205ENST00000558248 MRPL35Q9NZE8 188 aaKnown RBP2.29□□□□□ -2.04
LRRC28-205ENST00000558248 DNAH6Q9C0G6 4158 aa2.29□□□□□ -2.04
LRRC28-205ENST00000558248 P0C880 135 aa2.28□□□□□ -2.04
LRRC28-205ENST00000558248 PEA15Q15121 130 aa2.28□□□□□ -2.04
LRRC28-205ENST00000558248 DEFB114Q30KQ6 69 aa2.28□□□□□ -2.04
LRRC28-205ENST00000558248 C1orf137Q5JT78 98 aa2.28□□□□□ -2.04
LRRC28-205ENST00000558248 UNQ5815/PRO19632Q6UWF5 114 aa2.28□□□□□ -2.04
LRRC28-205ENST00000558248 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.28□□□□□ -2.04
LRRC28-205ENST00000558248 LEAP2Q969E1 77 aa2.28□□□□□ -2.04
LRRC28-205ENST00000558248 HMCN2Q8NDA2 5059 aa2.28□□□□□ -2.04
LRRC28-205ENST00000558248 LRP1BQ9NZR2 4599 aa2.27□□□□□ -2.05
LRRC28-205ENST00000558248 IGKCP01834 107 aa2.27□□□□□ -2.05
LRRC28-205ENST00000558248 MGST2Q99735 147 aa2.27□□□□□ -2.05
LRRC28-205ENST00000558248 CYP4F30PQ9H0H9 118 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms