RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 C14orf177Q52M58 125 aa2.54□□□□□ -2
ATXN3-248ENST00000558190 CIRBP-AS1Q8TBR5 109 aa2.54□□□□□ -2
ATXN3-248ENST00000558190 C7orf65Q6ZTY9 151 aa2.54□□□□□ -2
ATXN3-248ENST00000558190 NUP210Q8TEM1 1887 aaPredicted RBP2.54□□□□□ -2
ATXN3-248ENST00000558190 MGAM2Q2M2H8 2515 aa2.54□□□□□ -2
ATXN3-248ENST00000558190 WDR90Q96KV7 1748 aa2.54□□□□□ -2
ATXN3-248ENST00000558190 H3BPC8 53 aa2.54□□□□□ -2
ATXN3-248ENST00000558190 C9orf129Q5T035 196 aaKnown RBP2.53□□□□□ -2
ATXN3-248ENST00000558190 MIR22HGQ0VDD5 57 aa2.53□□□□□ -2
ATXN3-248ENST00000558190 LINC00167Q96N53 147 aa2.53□□□□□ -2
ATXN3-248ENST00000558190 COL11A2P13942 1736 aaPredicted RBP2.53□□□□□ -2
ATXN3-248ENST00000558190 LINC01600Q96MT4 127 aa2.53□□□□□ -2
ATXN3-248ENST00000558190 UNC79Q9P2D8 2635 aa2.53□□□□□ -2
ATXN3-248ENST00000558190 MDFIQ99750 246 aa2.53□□□□□ -2
ATXN3-248ENST00000558190 KIF26AQ9ULI4 1882 aaPredicted RBP2.53□□□□□ -2
ATXN3-248ENST00000558190 NYNRINQ9P2P1 1898 aaKnown RBP2.53□□□□□ -2
ATXN3-248ENST00000558190 ADAMTSL1Q8N6G6 1762 aa2.53□□□□□ -2
ATXN3-248ENST00000558190 TICRRQ7Z2Z1 1910 aa2.53□□□□□ -2.01
ATXN3-248ENST00000558190 COA5Q86WW8 74 aa2.53□□□□□ -2.01
ATXN3-248ENST00000558190 OBSCN-AS1Q96MR7 158 aa2.53□□□□□ -2.01
ATXN3-248ENST00000558190 CRIPTQ9P021 101 aa2.53□□□□□ -2.01
ATXN3-248ENST00000558190 CR1P17927 2039 aa2.52□□□□□ -2.01
ATXN3-248ENST00000558190 PRR26Q8N8Z3 221 aa2.52□□□□□ -2.01
ATXN3-248ENST00000558190 DEFB113Q30KQ7 82 aa2.52□□□□□ -2.01
ATXN3-248ENST00000558190 FP248Q71RG6 208 aaPredicted RBP2.52□□□□□ -2.01
ATXN3-248ENST00000558190 IGLV1-51P01701 117 aa2.52□□□□□ -2.01
ATXN3-248ENST00000558190 EP400Q96L91 3159 aa2.52□□□□□ -2.01
ATXN3-248ENST00000558190 Q6ZRU5 148 aa2.52□□□□□ -2.01
ATXN3-248ENST00000558190 IGLV5-45A0A087WSX0 123 aa2.52□□□□□ -2.01
ATXN3-248ENST00000558190 SIP14410 1827 aa2.52□□□□□ -2.01
ATXN3-248ENST00000558190 PRAC1Q96KF2 57 aa2.51□□□□□ -2.01
ATXN3-248ENST00000558190 C6orf48Q9UBA6 75 aa2.51□□□□□ -2.01
ATXN3-248ENST00000558190 A0A0G2JMZ2 1700 aa2.51□□□□□ -2.01
ATXN3-248ENST00000558190 LRRC37A2A6NM11 1700 aa2.51□□□□□ -2.01
ATXN3-248ENST00000558190 ZNF702PQ9H963 129 aa2.51□□□□□ -2.01
ATXN3-248ENST00000558190 EPM2AB3EWF7 344 aa2.51□□□□□ -2.01
ATXN3-248ENST00000558190 IGKV2D-30A0A075B6S6 120 aa2.51□□□□□ -2.01
ATXN3-248ENST00000558190 IGKV2-30P06310 120 aa2.51□□□□□ -2.01
ATXN3-248ENST00000558190 PLXNA2O75051 1894 aa2.51□□□□□ -2.01
ATXN3-248ENST00000558190 FBXL19-AS1Q494R0 122 aa2.51□□□□□ -2.01
ATXN3-248ENST00000558190 PRR15Q8IV56 129 aa2.5□□□□□ -2.01
ATXN3-248ENST00000558190 APLNQ9ULZ1 77 aa2.5□□□□□ -2.01
ATXN3-248ENST00000558190 LINC00313P59037 77 aa2.5□□□□□ -2.01
ATXN3-248ENST00000558190 IGLV6-57P01721 117 aa2.5□□□□□ -2.01
ATXN3-248ENST00000558190 LINC00588Q9Y4M8 146 aa2.5□□□□□ -2.01
ATXN3-248ENST00000558190 TANC1Q9C0D5 1861 aa2.5□□□□□ -2.01
ATXN3-248ENST00000558190 KIAA1549LQ6ZVL6 1849 aa2.5□□□□□ -2.01
ATXN3-248ENST00000558190 EML5Q05BV3 1969 aa2.5□□□□□ -2.01
ATXN3-248ENST00000558190 Q6ZRP5 223 aa2.5□□□□□ -2.01
ATXN3-248ENST00000558190 C1orf134Q5TEV5 83 aa2.49□□□□□ -2.01
ATXN3-248ENST00000558190 Q8NA96 180 aa2.49□□□□□ -2.01
ATXN3-248ENST00000558190 KLKP1Q107X0 134 aa2.49□□□□□ -2.01
ATXN3-248ENST00000558190 TET2Q6N021 2002 aaPredicted RBP2.49□□□□□ -2.01
ATXN3-248ENST00000558190 TEP1Q99973 2627 aaKnown RBP2.49□□□□□ -2.01
ATXN3-248ENST00000558190 STAB2Q8WWQ8 2551 aa2.49□□□□□ -2.01
ATXN3-248ENST00000558190 Q8N377 158 aa2.49□□□□□ -2.01
ATXN3-248ENST00000558190 CYSTM1Q9H1C7 97 aa2.49□□□□□ -2.01
ATXN3-248ENST00000558190 KTN1-AS1Q86SY8 53 aa2.49□□□□□ -2.01
ATXN3-248ENST00000558190 LINC01556Q5JQF7 62 aa2.49□□□□□ -2.01
ATXN3-248ENST00000558190 HECTD1Q9ULT8 2610 aa2.48□□□□□ -2.01
ATXN3-248ENST00000558190 CEP295Q9C0D2 2601 aa2.48□□□□□ -2.01
ATXN3-248ENST00000558190 LINC01554Q52M75 96 aa2.48□□□□□ -2.01
ATXN3-248ENST00000558190 UQCR11O14957 56 aa2.48□□□□□ -2.01
ATXN3-248ENST00000558190 Q8N9P0 234 aaPredicted RBP2.48□□□□□ -2.01
ATXN3-248ENST00000558190 C9orf163Q8N9P6 203 aa2.48□□□□□ -2.01
ATXN3-248ENST00000558190 NBEAL1Q6ZS30 2694 aa2.48□□□□□ -2.01
ATXN3-248ENST00000558190 HELZ2Q9BYK8 2649 aaKnown RBP2.48□□□□□ -2.01
ATXN3-248ENST00000558190 LTBP1Q14766 1721 aa2.48□□□□□ -2.01
ATXN3-248ENST00000558190 ADAMTS9Q9P2N4 1935 aa2.48□□□□□ -2.01
ATXN3-248ENST00000558190 ZNF106Q9H2Y7 1883 aaKnown RBP2.47□□□□□ -2.01
ATXN3-248ENST00000558190 COL4A6Q14031 1691 aa2.47□□□□□ -2.01
ATXN3-248ENST00000558190 Q8NBF4 154 aa2.47□□□□□ -2.01
ATXN3-248ENST00000558190 KCNQ1DNQ9H478 68 aa2.47□□□□□ -2.01
ATXN3-248ENST00000558190 NUP210LQ5VU65 1888 aa2.47□□□□□ -2.01
ATXN3-248ENST00000558190 A8MWP4 228 aa2.47□□□□□ -2.01
ATXN3-248ENST00000558190 LINC00476Q8WZB0 136 aa2.47□□□□□ -2.01
ATXN3-248ENST00000558190 PHF5AQ7RTV0 110 aaKnown RBP2.47□□□□□ -2.01
ATXN3-248ENST00000558190 PLXNA4Q9HCM2 1894 aa2.47□□□□□ -2.01
ATXN3-248ENST00000558190 TNRC6BQ9UPQ9 1833 aaKnown RBP2.47□□□□□ -2.01
ATXN3-248ENST00000558190 MOBPQ13875 183 aa2.47□□□□□ -2.01
ATXN3-248ENST00000558190 ODF3L2Q3SX64 289 aa2.46□□□□□ -2.02
ATXN3-248ENST00000558190 CDC42SE1Q9NRR8 79 aa2.46□□□□□ -2.02
ATXN3-248ENST00000558190 C16orf90A8MZG2 172 aa2.46□□□□□ -2.02
ATXN3-248ENST00000558190 CSAG1Q6PB30 78 aa2.46□□□□□ -2.02
ATXN3-248ENST00000558190 OCR1Q9BZK8 76 aa2.46□□□□□ -2.02
ATXN3-248ENST00000558190 AKAP13Q12802 2813 aa2.46□□□□□ -2.02
ATXN3-248ENST00000558190 OBSL1O75147 1896 aa2.46□□□□□ -2.02
ATXN3-248ENST00000558190 ANAPC11Q9NYG5 84 aa2.46□□□□□ -2.02
ATXN3-248ENST00000558190 CHD6Q8TD26 2715 aa2.46□□□□□ -2.02
ATXN3-248ENST00000558190 FAM168BA1KXE4 195 aa2.46□□□□□ -2.02
ATXN3-248ENST00000558190 LY6G6DO95868 133 aa2.46□□□□□ -2.02
ATXN3-248ENST00000558190 FAM104AQ969W3 186 aa2.45□□□□□ -2.02
ATXN3-248ENST00000558190 KRTAP16-1A8MUX0 517 aa2.45□□□□□ -2.02
ATXN3-248ENST00000558190 NOTCH1P46531 2555 aa2.45□□□□□ -2.02
ATXN3-248ENST00000558190 FAM229BQ4G0N7 80 aa2.45□□□□□ -2.02
ATXN3-248ENST00000558190 OXTP01178 125 aa2.45□□□□□ -2.02
ATXN3-248ENST00000558190 SPINK7P58062 85 aa2.45□□□□□ -2.02
ATXN3-248ENST00000558190 ALPK3Q96L96 1907 aa2.45□□□□□ -2.02
ATXN3-248ENST00000558190 IGLV7-46A0A075B6I9 117 aa2.45□□□□□ -2.02
ATXN3-248ENST00000558190 J3QKU1 62 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 120.7 ms