RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 SMIM4Q8WVI0 70 aa1.24□□□□□ -2.21
SPG11-206ENST00000558093 LINC00208Q96KT6 92 aa1.24□□□□□ -2.21
SPG11-206ENST00000558093 SPRR4Q96PI1 79 aa1.24□□□□□ -2.21
SPG11-206ENST00000558093 CMC2Q9NRP2 79 aa1.24□□□□□ -2.21
SPG11-206ENST00000558093 LINC00846Q9NV44 126 aa1.24□□□□□ -2.21
SPG11-206ENST00000558093 TMEM14CQ9P0S9 112 aa1.24□□□□□ -2.21
SPG11-206ENST00000558093 ADCY10Q96PN6 1610 aa1.24□□□□□ -2.21
SPG11-206ENST00000558093 CACNA1GO43497 2377 aa1.23□□□□□ -2.21
SPG11-206ENST00000558093 F5P12259 2224 aa1.23□□□□□ -2.21
SPG11-206ENST00000558093 TRGV2A0A075B6R0 118 aa1.23□□□□□ -2.21
SPG11-206ENST00000558093 H3BRN7 92 aa1.23□□□□□ -2.21
SPG11-206ENST00000558093 ENHOQ6UWT2 76 aa1.23□□□□□ -2.21
SPG11-206ENST00000558093 LINC00322Q6ZN03 302 aaPredicted RBP1.23□□□□□ -2.21
SPG11-206ENST00000558093 DEFB132Q7Z7B7 95 aa1.23□□□□□ -2.21
SPG11-206ENST00000558093 Q96NJ1 140 aa1.23□□□□□ -2.21
SPG11-206ENST00000558093 KIF21BO75037 1637 aa1.22□□□□□ -2.21
SPG11-206ENST00000558093 PLXNB2O15031 1838 aa1.22□□□□□ -2.21
SPG11-206ENST00000558093 ABCC8Q09428 1581 aa1.22□□□□□ -2.21
SPG11-206ENST00000558093 MROH2BQ7Z745 1585 aa1.22□□□□□ -2.21
SPG11-206ENST00000558093 NFAT5O94916 1531 aa1.22□□□□□ -2.21
SPG11-206ENST00000558093 NDUFB1O75438 58 aa1.22□□□□□ -2.21
SPG11-206ENST00000558093 SPATA8Q6RVD6 105 aa1.22□□□□□ -2.21
SPG11-206ENST00000558093 LINC00472Q9H8W2 130 aa1.22□□□□□ -2.21
SPG11-206ENST00000558093 TNCP24821 2201 aa1.21□□□□□ -2.21
SPG11-206ENST00000558093 TRBV6-1A0A0K0K1D8 114 aa1.21□□□□□ -2.22
SPG11-206ENST00000558093 ACYP2P14621 99 aa1.21□□□□□ -2.22
SPG11-206ENST00000558093 KRTAP12-1P59990 96 aa1.21□□□□□ -2.22
SPG11-206ENST00000558093 DEFB112Q30KQ8 113 aa1.21□□□□□ -2.22
SPG11-206ENST00000558093 ZNF625Q96I27 306 aaPredicted RBP1.21□□□□□ -2.22
SPG11-206ENST00000558093 GAFA1Q96PS6 74 aa1.21□□□□□ -2.22
SPG11-206ENST00000558093 C4AP0C0L4 1744 aa1.2□□□□□ -2.22
SPG11-206ENST00000558093 C4BP0C0L5 1744 aa1.2□□□□□ -2.22
SPG11-206ENST00000558093 BAHCC1Q9P281 2608 aa1.2□□□□□ -2.22
SPG11-206ENST00000558093 DEPDC5O75140 1603 aa1.2□□□□□ -2.22
SPG11-206ENST00000558093 LOC110117498A0A087WWA1 95 aa1.2□□□□□ -2.22
SPG11-206ENST00000558093 LINC00959A0A1B0GUT2 108 aa1.2□□□□□ -2.22
SPG11-206ENST00000558093 INE1O15225 51 aa1.2□□□□□ -2.22
SPG11-206ENST00000558093 CAV3P56539 151 aa1.2□□□□□ -2.22
SPG11-206ENST00000558093 COX17Q14061 63 aa1.2□□□□□ -2.22
SPG11-206ENST00000558093 COA5Q86WW8 74 aa1.2□□□□□ -2.22
SPG11-206ENST00000558093 UBL5Q9BZL1 73 aa1.2□□□□□ -2.22
SPG11-206ENST00000558093 ABRACLQ9P1F3 81 aa1.2□□□□□ -2.22
SPG11-206ENST00000558093 LCE6AA0A183 80 aa1.19□□□□□ -2.22
SPG11-206ENST00000558093 A0A1B0GU69 56 aa1.19□□□□□ -2.22
SPG11-206ENST00000558093 LRRC37A2A6NM11 1700 aa1.19□□□□□ -2.22
SPG11-206ENST00000558093 TXNDC17Q9BRA2 123 aa1.19□□□□□ -2.22
SPG11-206ENST00000558093 KRTAP4-1Q9BYQ7 146 aa1.19□□□□□ -2.22
SPG11-206ENST00000558093 GOLGA4Q13439 2230 aaKnown RBP1.19□□□□□ -2.22
SPG11-206ENST00000558093 URB1O60287 2271 aaKnown RBP1.18□□□□□ -2.22
SPG11-206ENST00000558093 M0R1W7 72 aa1.18□□□□□ -2.22
SPG11-206ENST00000558093 Q6ZRN7 208 aaPredicted RBP1.18□□□□□ -2.22
SPG11-206ENST00000558093 OBSCN-AS1Q96MR7 158 aa1.18□□□□□ -2.22
SPG11-206ENST00000558093 CCL19Q99731 98 aa1.18□□□□□ -2.22
SPG11-206ENST00000558093 TIMM8BQ9Y5J9 83 aaPredicted RBP1.18□□□□□ -2.22
SPG11-206ENST00000558093 E9PCH4 1651 aa1.18□□□□□ -2.22
SPG11-206ENST00000558093 KMT2BQ9UMN6 2715 aaPredicted RBP1.18□□□□□ -2.22
SPG11-206ENST00000558093 TECTAO75443 2155 aa1.18□□□□□ -2.22
SPG11-206ENST00000558093 ICE1Q9Y2F5 2266 aa1.17□□□□□ -2.22
SPG11-206ENST00000558093 SMIM27A0A1W2PRY6 76 aa1.17□□□□□ -2.22
SPG11-206ENST00000558093 I3L3M4 83 aa1.17□□□□□ -2.22
SPG11-206ENST00000558093 M0R2N4 97 aa1.17□□□□□ -2.22
SPG11-206ENST00000558093 NDUFA4O00483 81 aa1.17□□□□□ -2.22
SPG11-206ENST00000558093 SPINK4O60575 86 aa1.17□□□□□ -2.22
SPG11-206ENST00000558093 ARL14EPLP0DKL9 152 aa1.17□□□□□ -2.22
SPG11-206ENST00000558093 Q6ZQY7 126 aa1.17□□□□□ -2.22
SPG11-206ENST00000558093 KNTC1P50748 2209 aa1.16□□□□□ -2.22
SPG11-206ENST00000558093 COX7BP24311 80 aa1.16□□□□□ -2.22
SPG11-206ENST00000558093 PLNP26678 52 aa1.16□□□□□ -2.22
SPG11-206ENST00000558093 HAMPP81172 84 aa1.16□□□□□ -2.22
SPG11-206ENST00000558093 BPTFQ12830 3046 aa1.15□□□□□ -2.22
SPG11-206ENST00000558093 TULP4Q9NRJ4 1543 aa1.15□□□□□ -2.22
SPG11-206ENST00000558093 CLTCL1P53675 1640 aa1.15□□□□□ -2.22
SPG11-206ENST00000558093 A0A0G2JMZ2 1700 aa1.15□□□□□ -2.22
SPG11-206ENST00000558093 ASXL3Q9C0F0 2248 aa1.15□□□□□ -2.23
SPG11-206ENST00000558093 G3V318 75 aa1.15□□□□□ -2.23
SPG11-206ENST00000558093 SSBP3-AS1Q7Z2R9 100 aa1.15□□□□□ -2.23
SPG11-206ENST00000558093 SSC5DA1L4H1 1573 aa1.15□□□□□ -2.23
SPG11-206ENST00000558093 FBN3Q75N90 2809 aa1.15□□□□□ -2.23
SPG11-206ENST00000558093 ASCC3Q8N3C0 2202 aaKnown RBP1.15□□□□□ -2.23
SPG11-206ENST00000558093 ATP7AQ04656 1500 aa1.15□□□□□ -2.23
SPG11-206ENST00000558093 IGIPA6NJ69 53 aa1.14□□□□□ -2.23
SPG11-206ENST00000558093 PRB1P04280 392 aa1.14□□□□□ -2.23
SPG11-206ENST00000558093 COX6B1P14854 86 aa1.14□□□□□ -2.23
SPG11-206ENST00000558093 SERF2P84101 59 aa1.14□□□□□ -2.23
SPG11-206ENST00000558093 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.14□□□□□ -2.23
SPG11-206ENST00000558093 Q6ZRX8 168 aa1.14□□□□□ -2.23
SPG11-206ENST00000558093 LRRC37AA6NMS7 1700 aa1.14□□□□□ -2.23
SPG11-206ENST00000558093 ANKRD17O75179 2603 aaKnown RBP1.14□□□□□ -2.23
SPG11-206ENST00000558093 A0A096LNT2 108 aa1.13□□□□□ -2.23
SPG11-206ENST00000558093 GVQW2A0A096LPI5 108 aaPredicted RBP1.13□□□□□ -2.23
SPG11-206ENST00000558093 NCR3O14931 201 aa1.13□□□□□ -2.23
SPG11-206ENST00000558093 SNRPGP62308 76 aaKnown RBP1.13□□□□□ -2.23
SPG11-206ENST00000558093 KRTAP21-3Q3LHN1 58 aa1.13□□□□□ -2.23
SPG11-206ENST00000558093 SMIM11BQ8TCY0 68 aa1.13□□□□□ -2.23
SPG11-206ENST00000558093 PLAC4Q8WY50 150 aa1.13□□□□□ -2.23
SPG11-206ENST00000558093 GCC2Q8IWJ2 1684 aa1.13□□□□□ -2.23
SPG11-206ENST00000558093 LMO7Q8WWI1 1683 aa1.13□□□□□ -2.23
SPG11-206ENST00000558093 AHCTF1Q8WYP5 2266 aa1.13□□□□□ -2.23
SPG11-206ENST00000558093 ETDCA0A1B0GVM5 59 aa1.12□□□□□ -2.23
SPG11-206ENST00000558093 NDUFA3O95167 84 aa1.12□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms