RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 DNAH2Q9P225 4427 aa10.82□□□□□ -0.68
SNX1-203ENST00000558040 A0A096LNI7 61 aa10.82□□□□□ -0.68
SNX1-203ENST00000558040 A4D1N5 150 aa10.82□□□□□ -0.68
SNX1-203ENST00000558040 EIF4EBP3O60516 100 aaPredicted RBP10.82□□□□□ -0.68
SNX1-203ENST00000558040 FUSP35637 526 aaKnown RBP eCLIP10.82□□□□□ -0.68
SNX1-203ENST00000558040 FXYD2P54710 66 aa10.82□□□□□ -0.68
SNX1-203ENST00000558040 LINC01620Q4KN68 170 aa10.82□□□□□ -0.68
SNX1-203ENST00000558040 IGKV2-24A0A0C4DH68 120 aa10.81□□□□□ -0.68
SNX1-203ENST00000558040 NDUFC2O95298 119 aa10.81□□□□□ -0.68
SNX1-203ENST00000558040 C9orf129Q5T035 196 aaKnown RBP10.81□□□□□ -0.68
SNX1-203ENST00000558040 DNAH17Q9UFH2 4485 aa10.8□□□□□ -0.68
SNX1-203ENST00000558040 BATFQ16520 125 aa10.8□□□□□ -0.68
SNX1-203ENST00000558040 A6NDN8 102 aa10.79□□□□□ -0.68
SNX1-203ENST00000558040 PLA2G2DQ9UNK4 145 aa10.79□□□□□ -0.68
SNX1-203ENST00000558040 RYR2Q92736 4967 aa10.79□□□□□ -0.68
SNX1-203ENST00000558040 FRAS1Q86XX4 4008 aa10.79□□□□□ -0.68
SNX1-203ENST00000558040 NHP2Q9NX24 153 aaKnown RBP10.77□□□□□ -0.69
SNX1-203ENST00000558040 A0A0B4J2C4 111 aa10.76□□□□□ -0.69
SNX1-203ENST00000558040 A0A1B0GVY2 172 aa10.76□□□□□ -0.69
SNX1-203ENST00000558040 CHTF8P0CG12 524 aa10.76□□□□□ -0.69
SNX1-203ENST00000558040 VPREB1P12018 145 aa10.76□□□□□ -0.69
SNX1-203ENST00000558040 RAB37Q96AX2 223 aa10.76□□□□□ -0.69
SNX1-203ENST00000558040 KMT2CQ8NEZ4 4911 aaKnown RBP10.75□□□□□ -0.69
SNX1-203ENST00000558040 TRBV10-2A0A0K0K1G8 114 aa10.75□□□□□ -0.69
SNX1-203ENST00000558040 CFC1BP0CG36 223 aa10.75□□□□□ -0.69
SNX1-203ENST00000558040 CFC1P0CG37 223 aa10.75□□□□□ -0.69
SNX1-203ENST00000558040 NKAPP1Q8N9T2 125 aa10.75□□□□□ -0.69
SNX1-203ENST00000558040 SPACA4Q8TDM5 124 aa10.75□□□□□ -0.69
SNX1-203ENST00000558040 SNHG12Q9BXW3 62 aa10.75□□□□□ -0.69
SNX1-203ENST00000558040 TRAV13-2A0A0B4J235 113 aa10.74□□□□□ -0.69
SNX1-203ENST00000558040 NCR3O14931 201 aa10.74□□□□□ -0.69
SNX1-203ENST00000558040 Q8NDZ9 215 aa10.74□□□□□ -0.69
SNX1-203ENST00000558040 DPH3Q96FX2 82 aa10.74□□□□□ -0.69
SNX1-203ENST00000558040 IGLV5-37A0A075B6J1 123 aa10.73□□□□□ -0.69
SNX1-203ENST00000558040 IGKV2-28A0A075B6P5 120 aa10.73□□□□□ -0.69
SNX1-203ENST00000558040 A0A1B0GWB2 263 aa10.73□□□□□ -0.69
SNX1-203ENST00000558040 IGKV2D-28P01615 120 aa10.73□□□□□ -0.69
SNX1-203ENST00000558040 SERTAD4-AS1Q5TG53 156 aa10.73□□□□□ -0.69
SNX1-203ENST00000558040 FAM19A5Q7Z5A7 132 aaPredicted RBP10.73□□□□□ -0.69
SNX1-203ENST00000558040 FAM168BA1KXE4 195 aa10.72□□□□□ -0.69
SNX1-203ENST00000558040 M0R378 163 aa10.72□□□□□ -0.69
SNX1-203ENST00000558040 PRR3P79522 188 aaKnown RBP10.72□□□□□ -0.69
SNX1-203ENST00000558040 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.72□□□□□ -0.69
SNX1-203ENST00000558040 PRO1854Q9UHT4 67 aa10.71□□□□□ -0.69
SNX1-203ENST00000558040 A0A1W2PNN7 141 aa10.7□□□□□ -0.7
SNX1-203ENST00000558040 PANO1I0J062 215 aa10.7□□□□□ -0.7
SNX1-203ENST00000558040 K7ERJ3 54 aa10.7□□□□□ -0.7
SNX1-203ENST00000558040 S100A7L2Q5SY68 101 aa10.7□□□□□ -0.7
SNX1-203ENST00000558040 LINC00337Q8N6G1 96 aa10.7□□□□□ -0.7
SNX1-203ENST00000558040 OR13C6PQ8NH95 151 aa10.7□□□□□ -0.7
SNX1-203ENST00000558040 M0QXV9 152 aa10.69□□□□□ -0.7
SNX1-203ENST00000558040 KRTAP10-1P60331 282 aa10.69□□□□□ -0.7
SNX1-203ENST00000558040 COL5A1-AS1Q5SY13 56 aa10.69□□□□□ -0.7
SNX1-203ENST00000558040 TMEM126AQ9H061 195 aa10.69□□□□□ -0.7
SNX1-203ENST00000558040 C22orf24Q9Y442 160 aa10.69□□□□□ -0.7
SNX1-203ENST00000558040 FAT2Q9NYQ8 4349 aa10.69□□□□□ -0.7
SNX1-203ENST00000558040 RPL13AP40429 203 aaKnown RBP10.68□□□□□ -0.7
SNX1-203ENST00000558040 LBHQ53QV2 105 aaPredicted RBP10.68□□□□□ -0.7
SNX1-203ENST00000558040 MRPL55Q7Z7F7 128 aaKnown RBP10.68□□□□□ -0.7
SNX1-203ENST00000558040 A0A087WYN8 130 aa10.67□□□□□ -0.7
SNX1-203ENST00000558040 KRTAP7-1Q8IUC3 87 aa10.67□□□□□ -0.7
SNX1-203ENST00000558040 CBY1Q9Y3M2 126 aa10.67□□□□□ -0.7
SNX1-203ENST00000558040 Q6ZSA8 131 aa10.66□□□□□ -0.7
SNX1-203ENST00000558040 C7orf33Q8WU49 177 aa10.66□□□□□ -0.7
SNX1-203ENST00000558040 KRTAP3-3Q9BYR6 98 aa10.66□□□□□ -0.7
SNX1-203ENST00000558040 KRTAP3-2Q9BYR7 98 aa10.66□□□□□ -0.7
SNX1-203ENST00000558040 EPM2AB3EWF7 344 aa10.65□□□□□ -0.7
SNX1-203ENST00000558040 IGLV6-57P01721 117 aa10.65□□□□□ -0.7
SNX1-203ENST00000558040 Q1RN00 199 aa10.65□□□□□ -0.7
SNX1-203ENST00000558040 PLAC8Q9NZF1 115 aa10.65□□□□□ -0.7
SNX1-203ENST00000558040 TRBV10-3A0A0K0K1G6 114 aa10.64□□□□□ -0.71
SNX1-203ENST00000558040 GAGE10A6NGK3 116 aa10.64□□□□□ -0.71
SNX1-203ENST00000558040 H7C2G1 150 aa10.64□□□□□ -0.71
SNX1-203ENST00000558040 LINC00167Q96N53 147 aa10.63□□□□□ -0.71
SNX1-203ENST00000558040 FAM30AQ9NZY2 134 aa10.63□□□□□ -0.71
SNX1-203ENST00000558040 TSPAN13O95857 204 aa10.61□□□□□ -0.71
SNX1-203ENST00000558040 PHF5AQ7RTV0 110 aaKnown RBP10.61□□□□□ -0.71
SNX1-203ENST00000558040 HECTD4Q9Y4D8 3996 aa10.61□□□□□ -0.71
SNX1-203ENST00000558040 DNAH11Q96DT5 4516 aa10.61□□□□□ -0.71
SNX1-203ENST00000558040 IGLV1-50A0A075B6I6 118 aa10.6□□□□□ -0.71
SNX1-203ENST00000558040 TRAV23DV6A0A075B6W5 121 aa10.6□□□□□ -0.71
SNX1-203ENST00000558040 RPL37AP8A6NKH3 93 aa10.6□□□□□ -0.71
SNX1-203ENST00000558040 TAX1BP3O14907 124 aa10.6□□□□□ -0.71
SNX1-203ENST00000558040 UBE2BP63146 152 aa10.6□□□□□ -0.71
SNX1-203ENST00000558040 SCXQ7RTU7 201 aa10.59□□□□□ -0.71
SNX1-203ENST00000558040 CIRBP-AS1Q8TBR5 109 aa10.59□□□□□ -0.71
SNX1-203ENST00000558040 SMIM11BQ8TCY0 68 aa10.59□□□□□ -0.71
SNX1-203ENST00000558040 PKD1P98161 4303 aa10.58□□□□□ -0.72
SNX1-203ENST00000558040 PRYO14603 147 aa10.58□□□□□ -0.72
SNX1-203ENST00000558040 RPL28P46779 137 aaKnown RBP10.58□□□□□ -0.72
SNX1-203ENST00000558040 PSMB2P49721 201 aa10.58□□□□□ -0.72
SNX1-203ENST00000558040 KCNQ1DNQ9H478 68 aa10.58□□□□□ -0.72
SNX1-203ENST00000558040 C9orf118A6NHY6 69 aa10.57□□□□□ -0.72
SNX1-203ENST00000558040 ZNF73O43830 326 aaPredicted RBP10.56□□□□□ -0.72
SNX1-203ENST00000558040 DIRC1Q969H9 104 aa10.56□□□□□ -0.72
SNX1-203ENST00000558040 RYR3Q15413 4870 aa10.55□□□□□ -0.72
SNX1-203ENST00000558040 H3BUT2 72 aa10.55□□□□□ -0.72
SNX1-203ENST00000558040 COX6CP09669 75 aa10.55□□□□□ -0.72
SNX1-203ENST00000558040 TRIAP1O43715 76 aa10.54□□□□□ -0.72
SNX1-203ENST00000558040 VAMP3Q15836 100 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms