RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 SCO1O75880 301 aa7.96□□□□□ -1.14
SNRPA1-204ENST00000558020 ZNF625Q96I27 306 aaPredicted RBP7.96□□□□□ -1.14
SNRPA1-204ENST00000558020 A0A096LNJ9 63 aa7.95□□□□□ -1.14
SNRPA1-204ENST00000558020 LINC00158P58513 81 aa7.95□□□□□ -1.14
SNRPA1-204ENST00000558020 PRLHP81277 87 aa7.95□□□□□ -1.14
SNRPA1-204ENST00000558020 KRTAP13-2Q52LG2 175 aa7.95□□□□□ -1.14
SNRPA1-204ENST00000558020 TMEM238C9JI98 176 aa7.94□□□□□ -1.14
SNRPA1-204ENST00000558020 ATP6V1G1O75348 118 aa7.94□□□□□ -1.14
SNRPA1-204ENST00000558020 PMCHL1Q16048 86 aa7.94□□□□□ -1.14
SNRPA1-204ENST00000558020 CBLN2Q8IUK8 224 aa7.94□□□□□ -1.14
SNRPA1-204ENST00000558020 C11orf86A6NJI1 115 aa7.93□□□□□ -1.14
SNRPA1-204ENST00000558020 M0R378 163 aa7.93□□□□□ -1.14
SNRPA1-204ENST00000558020 PLEKHB2Q96CS7 222 aa7.93□□□□□ -1.14
SNRPA1-204ENST00000558020 URB1-AS1Q96HZ7 61 aa7.93□□□□□ -1.14
SNRPA1-204ENST00000558020 CHTOPQ9Y3Y2 248 aaKnown RBP7.93□□□□□ -1.14
SNRPA1-204ENST00000558020 MUC2Q02817 5179 aa7.92□□□□□ -1.14
SNRPA1-204ENST00000558020 HIGD2AQ9BW72 106 aa7.91□□□□□ -1.14
SNRPA1-204ENST00000558020 CDIP1Q9H305 208 aa7.91□□□□□ -1.14
SNRPA1-204ENST00000558020 LINC00587B1AMM8 73 aa7.9□□□□□ -1.14
SNRPA1-204ENST00000558020 SPAG11AQ6PDA7 123 aa7.9□□□□□ -1.14
SNRPA1-204ENST00000558020 RETNLBQ9BQ08 111 aa7.9□□□□□ -1.14
SNRPA1-204ENST00000558020 ZNF706Q9Y5V0 76 aaPredicted RBP7.9□□□□□ -1.14
SNRPA1-204ENST00000558020 IGLV7-46A0A075B6I9 117 aa7.89□□□□□ -1.15
SNRPA1-204ENST00000558020 CHCHD1Q96BP2 118 aaKnown RBP7.89□□□□□ -1.15
SNRPA1-204ENST00000558020 YPEL4Q96NS1 127 aa7.89□□□□□ -1.15
SNRPA1-204ENST00000558020 TRAV12-1A0A0B4J245 112 aa7.88□□□□□ -1.15
SNRPA1-204ENST00000558020 S100A12P80511 92 aa7.88□□□□□ -1.15
SNRPA1-204ENST00000558020 IFI27L1Q96BM0 104 aa7.88□□□□□ -1.15
SNRPA1-204ENST00000558020 A0A0U1RRA0 63 aa7.87□□□□□ -1.15
SNRPA1-204ENST00000558020 TMEM223A0PJW6 202 aa7.87□□□□□ -1.15
SNRPA1-204ENST00000558020 HERV-K104P63124 156 aa7.87□□□□□ -1.15
SNRPA1-204ENST00000558020 TPRXLQ17RH7 258 aa7.87□□□□□ -1.15
SNRPA1-204ENST00000558020 Q8NDZ9 215 aa7.87□□□□□ -1.15
SNRPA1-204ENST00000558020 MEIG1Q5JSS6 88 aa7.86□□□□□ -1.15
SNRPA1-204ENST00000558020 BOD1L2Q8IYS8 172 aa7.86□□□□□ -1.15
SNRPA1-204ENST00000558020 MAP1LC3CQ9BXW4 147 aa7.86□□□□□ -1.15
SNRPA1-204ENST00000558020 PRYO14603 147 aa7.85□□□□□ -1.15
SNRPA1-204ENST00000558020 SMIM13P0DJ93 91 aa7.85□□□□□ -1.15
SNRPA1-204ENST00000558020 SPRR4Q96PI1 79 aa7.85□□□□□ -1.15
SNRPA1-204ENST00000558020 MYMXA0A1B0GTQ4 84 aa7.84□□□□□ -1.15
SNRPA1-204ENST00000558020 C3orf22Q8N5N4 141 aa7.84□□□□□ -1.15
SNRPA1-204ENST00000558020 LINC00337Q8N6G1 96 aa7.84□□□□□ -1.15
SNRPA1-204ENST00000558020 ETDCA0A1B0GVM5 59 aa7.83□□□□□ -1.16
SNRPA1-204ENST00000558020 HSBP1O75506 76 aa7.83□□□□□ -1.16
SNRPA1-204ENST00000558020 MIR7-3HGQ8N6C7 128 aa7.83□□□□□ -1.16
SNRPA1-204ENST00000558020 PPDPFQ9H3Y8 114 aa7.83□□□□□ -1.16
SNRPA1-204ENST00000558020 KCNQ1DNQ9H478 68 aa7.83□□□□□ -1.16
SNRPA1-204ENST00000558020 NDUFA12Q9UI09 145 aa7.82□□□□□ -1.16
SNRPA1-204ENST00000558020 LCE2BO14633 110 aa7.81□□□□□ -1.16
SNRPA1-204ENST00000558020 TRGC2P03986 189 aa7.81□□□□□ -1.16
SNRPA1-204ENST00000558020 FP248Q71RG6 208 aaPredicted RBP7.81□□□□□ -1.16
SNRPA1-204ENST00000558020 SMCR5Q8TEV8 140 aa7.81□□□□□ -1.16
SNRPA1-204ENST00000558020 A6NJY4 79 aa7.8□□□□□ -1.16
SNRPA1-204ENST00000558020 NCR3O14931 201 aa7.8□□□□□ -1.16
SNRPA1-204ENST00000558020 SPRR1AP35321 89 aa7.8□□□□□ -1.16
SNRPA1-204ENST00000558020 COLCA2A8K830 154 aa7.79□□□□□ -1.16
SNRPA1-204ENST00000558020 SPINK1P00995 79 aa7.79□□□□□ -1.16
SNRPA1-204ENST00000558020 TRBV10-3A0A0K0K1G6 114 aa7.78□□□□□ -1.16
SNRPA1-204ENST00000558020 H0Y8G0 127 aa7.78□□□□□ -1.16
SNRPA1-204ENST00000558020 PLNP26678 52 aa7.78□□□□□ -1.16
SNRPA1-204ENST00000558020 FAM19A2Q8N3H0 131 aa7.78□□□□□ -1.16
SNRPA1-204ENST00000558020 Q8NBF4 154 aa7.78□□□□□ -1.16
SNRPA1-204ENST00000558020 LEPROTL1O95214 131 aa7.77□□□□□ -1.17
SNRPA1-204ENST00000558020 MIEN1Q9BRT3 115 aa7.77□□□□□ -1.17
SNRPA1-204ENST00000558020 TRBV10-2A0A0K0K1G8 114 aa7.76□□□□□ -1.17
SNRPA1-204ENST00000558020 KRTAP4-16G5E9R7 235 aaPredicted RBP7.76□□□□□ -1.17
SNRPA1-204ENST00000558020 LEPROTO15243 131 aa7.76□□□□□ -1.17
SNRPA1-204ENST00000558020 HERVK_113P61574 105 aa7.76□□□□□ -1.17
SNRPA1-204ENST00000558020 DAND5Q8N907 189 aa7.76□□□□□ -1.17
SNRPA1-204ENST00000558020 LOC107984156A0A0G2JMH3 177 aa7.75□□□□□ -1.17
SNRPA1-204ENST00000558020 DDTP30046 118 aa7.75□□□□□ -1.17
SNRPA1-204ENST00000558020 SMCPP49901 116 aaPredicted RBP7.75□□□□□ -1.17
SNRPA1-204ENST00000558020 LINC00483Q53H64 154 aa7.75□□□□□ -1.17
SNRPA1-204ENST00000558020 GAGE2AQ6NT46 116 aa7.75□□□□□ -1.17
SNRPA1-204ENST00000558020 ARL17AQ8IVW1 177 aa7.75□□□□□ -1.17
SNRPA1-204ENST00000558020 HSPB8Q9UJY1 196 aa7.75□□□□□ -1.17
SNRPA1-204ENST00000558020 B5MCH6 92 aa7.74□□□□□ -1.17
SNRPA1-204ENST00000558020 NMUP48645 174 aa7.74□□□□□ -1.17
SNRPA1-204ENST00000558020 SSBP3-AS1Q7Z2R9 100 aa7.74□□□□□ -1.17
SNRPA1-204ENST00000558020 J3QQQ9 107 aa7.73□□□□□ -1.17
SNRPA1-204ENST00000558020 DPM2O94777 84 aa7.73□□□□□ -1.17
SNRPA1-204ENST00000558020 S100A1P23297 94 aa7.73□□□□□ -1.17
SNRPA1-204ENST00000558020 JOSD1Q15040 202 aaPredicted RBP7.73□□□□□ -1.17
SNRPA1-204ENST00000558020 S100A7L2Q5SY68 101 aa7.73□□□□□ -1.17
SNRPA1-204ENST00000558020 SPANXB1Q9NS25 103 aaPredicted RBP7.73□□□□□ -1.17
SNRPA1-204ENST00000558020 SERF1AO75920 110 aa7.72□□□□□ -1.17
SNRPA1-204ENST00000558020 LGALS3P17931 250 aaKnown RBP7.72□□□□□ -1.17
SNRPA1-204ENST00000558020 LCE2AQ5TA79 106 aaPredicted RBP7.72□□□□□ -1.17
SNRPA1-204ENST00000558020 IGLV9-49A0A0B4J1Y8 123 aa7.71□□□□□ -1.18
SNRPA1-204ENST00000558020 NDUFC2O95298 119 aa7.71□□□□□ -1.18
SNRPA1-204ENST00000558020 Q6ZRX8 168 aa7.71□□□□□ -1.18
SNRPA1-204ENST00000558020 CBY1Q9Y3M2 126 aa7.71□□□□□ -1.18
SNRPA1-204ENST00000558020 FABP4P15090 132 aa7.7□□□□□ -1.18
SNRPA1-204ENST00000558020 TSPEAR-AS2P59090 65 aa7.7□□□□□ -1.18
SNRPA1-204ENST00000558020 RPS29P62273 56 aaKnown RBP7.7□□□□□ -1.18
SNRPA1-204ENST00000558020 MOBPQ13875 183 aa7.7□□□□□ -1.18
SNRPA1-204ENST00000558020 KRTAP13-3Q3SY46 172 aa7.7□□□□□ -1.18
SNRPA1-204ENST00000558020 SLC25A20O43772 301 aa7.69□□□□□ -1.18
SNRPA1-204ENST00000558020 IGKCP01834 107 aa7.69□□□□□ -1.18
SNRPA1-204ENST00000558020 HINT1P49773 126 aaPredicted RBP7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms