RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 ZNF625Q96I27 306 aaPredicted RBP9.12□□□□□ -0.95
SCFD1-224ENST00000557713 PPDPFQ9H3Y8 114 aa9.12□□□□□ -0.95
SCFD1-224ENST00000557713 URB1-AS1Q96HZ7 61 aa9.11□□□□□ -0.95
SCFD1-224ENST00000557713 SPAG11AQ6PDA7 123 aa9.1□□□□□ -0.95
SCFD1-224ENST00000557713 HIGD2AQ9BW72 106 aa9.1□□□□□ -0.95
SCFD1-224ENST00000557713 SPRR4Q96PI1 79 aa9.09□□□□□ -0.95
SCFD1-224ENST00000557713 SEC11CQ9BY50 192 aa9.09□□□□□ -0.95
SCFD1-224ENST00000557713 C11orf86A6NJI1 115 aa9.08□□□□□ -0.96
SCFD1-224ENST00000557713 SFTA2Q6UW10 78 aa9.08□□□□□ -0.96
SCFD1-224ENST00000557713 LINC00614P0C842 121 aa9.07□□□□□ -0.96
SCFD1-224ENST00000557713 KRTAP9-6A0A140TA67 174 aa9.06□□□□□ -0.96
SCFD1-224ENST00000557713 HBDP02042 147 aa9.06□□□□□ -0.96
SCFD1-224ENST00000557713 TMEM170BQ5T4T1 132 aa9.06□□□□□ -0.96
SCFD1-224ENST00000557713 FP248Q71RG6 208 aaPredicted RBP9.06□□□□□ -0.96
SCFD1-224ENST00000557713 BAGE3Q86Y29 109 aa9.06□□□□□ -0.96
SCFD1-224ENST00000557713 C18orf32Q8TCD1 76 aa9.06□□□□□ -0.96
SCFD1-224ENST00000557713 LINC00158P58513 81 aa9.05□□□□□ -0.96
SCFD1-224ENST00000557713 PMCHL1Q16048 86 aa9.05□□□□□ -0.96
SCFD1-224ENST00000557713 KRTAP13-3Q3SY46 172 aa9.03□□□□□ -0.96
SCFD1-224ENST00000557713 C4orf48Q5BLP8 95 aa9.03□□□□□ -0.96
SCFD1-224ENST00000557713 ZNF706Q9Y5V0 76 aaPredicted RBP9.03□□□□□ -0.96
SCFD1-224ENST00000557713 A0A0U1RRA0 63 aa9.02□□□□□ -0.97
SCFD1-224ENST00000557713 IFITM2Q01629 132 aa9.02□□□□□ -0.97
SCFD1-224ENST00000557713 C10orf91Q5T1B1 145 aa9.02□□□□□ -0.97
SCFD1-224ENST00000557713 DAND5Q8N907 189 aa9.02□□□□□ -0.97
SCFD1-224ENST00000557713 Q8NBF4 154 aa9.02□□□□□ -0.97
SCFD1-224ENST00000557713 SPRR1AP35321 89 aa9.01□□□□□ -0.97
SCFD1-224ENST00000557713 LINC00337Q8N6G1 96 aa9.01□□□□□ -0.97
SCFD1-224ENST00000557713 RPS10P5Q9NQ39 176 aa9.01□□□□□ -0.97
SCFD1-224ENST00000557713 CHTOPQ9Y3Y2 248 aaKnown RBP9.01□□□□□ -0.97
SCFD1-224ENST00000557713 TRAPPC1Q9Y5R8 145 aa9.01□□□□□ -0.97
SCFD1-224ENST00000557713 TMEM223A0PJW6 202 aa9□□□□□ -0.97
SCFD1-224ENST00000557713 KRTAP4-16G5E9R7 235 aaPredicted RBP9□□□□□ -0.97
SCFD1-224ENST00000557713 PRYO14603 147 aa9□□□□□ -0.97
SCFD1-224ENST00000557713 RHEBQ15382 184 aa9□□□□□ -0.97
SCFD1-224ENST00000557713 ASB16-AS1Q495Z4 193 aa9□□□□□ -0.97
SCFD1-224ENST00000557713 SMCR5Q8TEV8 140 aa9□□□□□ -0.97
SCFD1-224ENST00000557713 KCNQ1DNQ9H478 68 aa9□□□□□ -0.97
SCFD1-224ENST00000557713 SMIM13P0DJ93 91 aa8.99□□□□□ -0.97
SCFD1-224ENST00000557713 SPINK1P00995 79 aa8.98□□□□□ -0.97
SCFD1-224ENST00000557713 BOD1L2Q8IYS8 172 aa8.98□□□□□ -0.97
SCFD1-224ENST00000557713 LINC00483Q53H64 154 aa8.97□□□□□ -0.97
SCFD1-224ENST00000557713 TRAV12-1A0A0B4J245 112 aa8.96□□□□□ -0.98
SCFD1-224ENST00000557713 NCR3O14931 201 aa8.96□□□□□ -0.98
SCFD1-224ENST00000557713 ATP6V1G1O75348 118 aa8.96□□□□□ -0.98
SCFD1-224ENST00000557713 MIR7-3HGQ8N6C7 128 aa8.96□□□□□ -0.98
SCFD1-224ENST00000557713 KRTAP4-1Q9BYQ7 146 aa8.96□□□□□ -0.98
SCFD1-224ENST00000557713 COMMD7Q86VX2 200 aa8.95□□□□□ -0.98
SCFD1-224ENST00000557713 TRBV10-3A0A0K0K1G6 114 aa8.94□□□□□ -0.98
SCFD1-224ENST00000557713 ETDCA0A1B0GVM5 59 aa8.94□□□□□ -0.98
SCFD1-224ENST00000557713 MEIG1Q5JSS6 88 aa8.94□□□□□ -0.98
SCFD1-224ENST00000557713 HERV-K104P63124 156 aa8.93□□□□□ -0.98
SCFD1-224ENST00000557713 LINC01547P58512 204 aaPredicted RBP8.92□□□□□ -0.98
SCFD1-224ENST00000557713 GAGE2AQ6NT46 116 aa8.92□□□□□ -0.98
SCFD1-224ENST00000557713 IFI27L1Q96BM0 104 aa8.92□□□□□ -0.98
SCFD1-224ENST00000557713 LINC00587B1AMM8 73 aa8.91□□□□□ -0.98
SCFD1-224ENST00000557713 B5MCH6 92 aa8.91□□□□□ -0.98
SCFD1-224ENST00000557713 LCE2BO14633 110 aa8.91□□□□□ -0.98
SCFD1-224ENST00000557713 SEC61BP60468 96 aaKnown RBP8.91□□□□□ -0.98
SCFD1-224ENST00000557713 RPS29P62273 56 aaKnown RBP8.91□□□□□ -0.98
SCFD1-224ENST00000557713 SSBP3-AS1Q7Z2R9 100 aa8.91□□□□□ -0.98
SCFD1-224ENST00000557713 Q8N377 158 aa8.91□□□□□ -0.98
SCFD1-224ENST00000557713 ERC2-IT1O76042 136 aa8.9□□□□□ -0.98
SCFD1-224ENST00000557713 CHCHD1Q96BP2 118 aaKnown RBP8.9□□□□□ -0.98
SCFD1-224ENST00000557713 NDUFA12Q9UI09 145 aa8.9□□□□□ -0.98
SCFD1-224ENST00000557713 LOC107984156A0A0G2JMH3 177 aa8.89□□□□□ -0.99
SCFD1-224ENST00000557713 MOBPQ13875 183 aa8.89□□□□□ -0.99
SCFD1-224ENST00000557713 ARL17AQ8IVW1 177 aa8.89□□□□□ -0.99
SCFD1-224ENST00000557713 IGLV9-49A0A0B4J1Y8 123 aa8.88□□□□□ -0.99
SCFD1-224ENST00000557713 MYMXA0A1B0GTQ4 84 aa8.88□□□□□ -0.99
SCFD1-224ENST00000557713 MAP1LC3CQ9BXW4 147 aa8.88□□□□□ -0.99
SCFD1-224ENST00000557713 S100A12P80511 92 aa8.87□□□□□ -0.99
SCFD1-224ENST00000557713 Q9BRP9 147 aa8.87□□□□□ -0.99
SCFD1-224ENST00000557713 TRBV10-2A0A0K0K1G8 114 aa8.86□□□□□ -0.99
SCFD1-224ENST00000557713 SLC25A20O43772 301 aa8.86□□□□□ -0.99
SCFD1-224ENST00000557713 DDTP30046 118 aa8.86□□□□□ -0.99
SCFD1-224ENST00000557713 FAM19A2Q8N3H0 131 aa8.86□□□□□ -0.99
SCFD1-224ENST00000557713 XP32Q5T750 250 aa8.85□□□□□ -0.99
SCFD1-224ENST00000557713 APOC3P02656 99 aa8.84□□□□□ -0.99
SCFD1-224ENST00000557713 TSPEAR-AS2P59090 65 aa8.84□□□□□ -0.99
SCFD1-224ENST00000557713 Q6ZRX8 168 aa8.84□□□□□ -0.99
SCFD1-224ENST00000557713 YPEL4Q96NS1 127 aa8.84□□□□□ -0.99
SCFD1-224ENST00000557713 LEPROTO15243 131 aa8.82□□□□□ -1
SCFD1-224ENST00000557713 SNAPINO95295 136 aa8.81□□□□□ -1
SCFD1-224ENST00000557713 IGLV6-57P01721 117 aa8.81□□□□□ -1
SCFD1-224ENST00000557713 HSBP1O75506 76 aa8.8□□□□□ -1
SCFD1-224ENST00000557713 LCE2CQ5TA81 110 aa8.8□□□□□ -1
SCFD1-224ENST00000557713 SVBPQ8N300 66 aa8.8□□□□□ -1
SCFD1-224ENST00000557713 SPANXB1Q9NS25 103 aaPredicted RBP8.8□□□□□ -1
SCFD1-224ENST00000557713 H0Y8G0 127 aa8.79□□□□□ -1
SCFD1-224ENST00000557713 NDUFC2O95298 119 aa8.79□□□□□ -1
SCFD1-224ENST00000557713 J3QQQ9 107 aa8.78□□□□□ -1
SCFD1-224ENST00000557713 JOSD1Q15040 202 aaPredicted RBP8.77□□□□□ -1.01
SCFD1-224ENST00000557713 S100A7L2Q5SY68 101 aa8.77□□□□□ -1.01
SCFD1-224ENST00000557713 TRAV23DV6A0A075B6W5 121 aa8.76□□□□□ -1.01
SCFD1-224ENST00000557713 LEPROTL1O95214 131 aa8.76□□□□□ -1.01
SCFD1-224ENST00000557713 NMUP48645 174 aa8.76□□□□□ -1.01
SCFD1-224ENST00000557713 NDUFA5Q16718 116 aa8.76□□□□□ -1.01
SCFD1-224ENST00000557713 C9orf153Q5TBE3 101 aa8.76□□□□□ -1.01
SCFD1-224ENST00000557713 ST20-AS1Q8NBB2 130 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms