RNA–Protein interactions for RNA: ENST00000557702.5

PABPN1-208, Transcript of poly(A) binding protein nuclear 1, human

TSL 2 BASIC

Gene PABPN1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPN1-208	ENST00000557702	MACF1	Q9UPN3	7388 aa	Known RBP	5.29	□□□□□ -1.56
PABPN1-208	ENST00000557702	TRAV12-1	A0A0B4J245	112 aa		5.29	□□□□□ -1.56
PABPN1-208	ENST00000557702	C20orf202	A1L168	122 aa		5.29	□□□□□ -1.56
PABPN1-208	ENST00000557702		F8WDY8	70 aa		5.29	□□□□□ -1.56
PABPN1-208	ENST00000557702		H0Y8G0	127 aa		5.29	□□□□□ -1.56
PABPN1-208	ENST00000557702	NDUFA1	O15239	70 aa		5.29	□□□□□ -1.56
PABPN1-208	ENST00000557702	SCGB1D1	O95968	90 aa		5.29	□□□□□ -1.56
PABPN1-208	ENST00000557702	MRPS36	P82909	103 aa	Known RBP	5.29	□□□□□ -1.56
PABPN1-208	ENST00000557702	PYY3	Q5JQD4	70 aa		5.29	□□□□□ -1.56
PABPN1-208	ENST00000557702	PAPPA-AS1	Q5QFB9	102 aa		5.29	□□□□□ -1.56
PABPN1-208	ENST00000557702	LINC00242	Q5T6M2	205 aa		5.29	□□□□□ -1.56
PABPN1-208	ENST00000557702	C5orf38	Q86SI9	138 aa		5.29	□□□□□ -1.56
PABPN1-208	ENST00000557702	CDC42SE2	Q9NRR3	84 aa		5.29	□□□□□ -1.56
PABPN1-208	ENST00000557702	SMIM6	P0DI80	62 aa		5.28	□□□□□ -1.56
PABPN1-208	ENST00000557702	PMVK	Q15126	192 aa		5.28	□□□□□ -1.56
PABPN1-208	ENST00000557702	LINC01545	Q5VT33	79 aa		5.28	□□□□□ -1.56
PABPN1-208	ENST00000557702		Q6ZUT4	128 aa		5.28	□□□□□ -1.56
PABPN1-208	ENST00000557702	FAM104A	Q969W3	186 aa		5.28	□□□□□ -1.56
PABPN1-208	ENST00000557702	AMELX	Q99217	191 aa		5.28	□□□□□ -1.56
PABPN1-208	ENST00000557702	ZC2HC1B	Q5TFG8	222 aa		5.27	□□□□□ -1.57
PABPN1-208	ENST00000557702	TEX43	Q6ZNM6	134 aa		5.27	□□□□□ -1.57
PABPN1-208	ENST00000557702	VCX2	Q9H322	139 aa		5.27	□□□□□ -1.57
PABPN1-208	ENST00000557702	CST9L	Q9H4G1	147 aa		5.27	□□□□□ -1.57
PABPN1-208	ENST00000557702	CHTOP	Q9Y3Y2	248 aa	Known RBP	5.27	□□□□□ -1.57
PABPN1-208	ENST00000557702		F8VRH5	84 aa		5.26	□□□□□ -1.57
PABPN1-208	ENST00000557702	BCE1	O60756	84 aa		5.26	□□□□□ -1.57
PABPN1-208	ENST00000557702	LBH	Q53QV2	105 aa	Predicted RBP	5.26	□□□□□ -1.57
PABPN1-208	ENST00000557702	RNASE13	Q5GAN3	156 aa	Known RBP	5.26	□□□□□ -1.57
PABPN1-208	ENST00000557702	C10orf25	Q5T742	122 aa		5.26	□□□□□ -1.57
PABPN1-208	ENST00000557702	SPAG11A	Q6PDA7	123 aa		5.26	□□□□□ -1.57
PABPN1-208	ENST00000557702	UNQ6190/PRO20217	Q6UXQ8	127 aa		5.26	□□□□□ -1.57
PABPN1-208	ENST00000557702	PMCHL2	Q9BQD1	86 aa		5.26	□□□□□ -1.57
PABPN1-208	ENST00000557702	C2orf88	Q9BSF0	95 aa		5.26	□□□□□ -1.57
PABPN1-208	ENST00000557702	C6orf48	Q9UBA6	75 aa		5.26	□□□□□ -1.57
PABPN1-208	ENST00000557702	IGKC	P01834	107 aa		5.25	□□□□□ -1.57
PABPN1-208	ENST00000557702	C9orf129	Q5T035	196 aa	Known RBP	5.25	□□□□□ -1.57
PABPN1-208	ENST00000557702	LINC00518	Q8N0U6	118 aa		5.25	□□□□□ -1.57
PABPN1-208	ENST00000557702	ORAOV1	Q8WV07	137 aa		5.25	□□□□□ -1.57
PABPN1-208	ENST00000557702	FLG	P20930	4061 aa	Predicted RBP	5.24	□□□□□ -1.57
PABPN1-208	ENST00000557702	TRAV13-1	A0A0B4J241	112 aa		5.24	□□□□□ -1.57
PABPN1-208	ENST00000557702	DPM2	O94777	84 aa		5.24	□□□□□ -1.57
PABPN1-208	ENST00000557702	PLN	P26678	52 aa		5.24	□□□□□ -1.57
PABPN1-208	ENST00000557702	FAM19A3	Q7Z5A8	133 aa		5.24	□□□□□ -1.57
PABPN1-208	ENST00000557702	ATOH7	Q8N100	152 aa		5.24	□□□□□ -1.57
PABPN1-208	ENST00000557702	C12orf57	Q99622	126 aa		5.24	□□□□□ -1.57
PABPN1-208	ENST00000557702	C22orf24	Q9Y442	160 aa		5.24	□□□□□ -1.57
PABPN1-208	ENST00000557702	IGLC3	P0DOY3	106 aa		5.23	□□□□□ -1.57
PABPN1-208	ENST00000557702	S100A12	P80511	92 aa		5.23	□□□□□ -1.57
PABPN1-208	ENST00000557702	XP32	Q5T750	250 aa		5.23	□□□□□ -1.57
PABPN1-208	ENST00000557702	DAND5	Q8N907	189 aa		5.23	□□□□□ -1.57
PABPN1-208	ENST00000557702	TINCR	A0A1B0GVN0	87 aa		5.22	□□□□□ -1.57
PABPN1-208	ENST00000557702	C11orf86	A6NJI1	115 aa		5.22	□□□□□ -1.57
PABPN1-208	ENST00000557702	NDUFC2-KCTD14	E9PQ53	114 aa		5.22	□□□□□ -1.57
PABPN1-208	ENST00000557702	HERVK_113	P63121	156 aa		5.22	□□□□□ -1.57
PABPN1-208	ENST00000557702	SEC11A	P67812	179 aa		5.22	□□□□□ -1.57
PABPN1-208	ENST00000557702	C4orf48	Q5BLP8	95 aa		5.22	□□□□□ -1.57
PABPN1-208	ENST00000557702	VAMP8	Q9BV40	100 aa		5.22	□□□□□ -1.57
PABPN1-208	ENST00000557702	HSBP1L1	C9JCN9	74 aa		5.21	□□□□□ -1.58
PABPN1-208	ENST00000557702	ZNF22	P17026	224 aa	Predicted RBP	5.21	□□□□□ -1.58
PABPN1-208	ENST00000557702	UBE2A	P49459	152 aa		5.21	□□□□□ -1.58
PABPN1-208	ENST00000557702	TMEM170B	Q5T4T1	132 aa		5.21	□□□□□ -1.58
PABPN1-208	ENST00000557702	GEMIN7	Q9H840	131 aa	Known RBP	5.21	□□□□□ -1.58
PABPN1-208	ENST00000557702	PAM16	Q9Y3D7	125 aa		5.21	□□□□□ -1.58
PABPN1-208	ENST00000557702	IGLV8-61	A0A075B6I0	122 aa		5.2	□□□□□ -1.58
PABPN1-208	ENST00000557702	IGLV5-45	A0A087WSX0	123 aa		5.2	□□□□□ -1.58
PABPN1-208	ENST00000557702	TRBV30	A0A0K0K1B3	111 aa		5.2	□□□□□ -1.58
PABPN1-208	ENST00000557702	SPATA45	Q537H7	98 aa		5.2	□□□□□ -1.58
PABPN1-208	ENST00000557702	ANKRD39	Q53RE8	183 aa		5.2	□□□□□ -1.58
PABPN1-208	ENST00000557702	TMEM223	A0PJW6	202 aa		5.19	□□□□□ -1.58
PABPN1-208	ENST00000557702	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	5.19	□□□□□ -1.58
PABPN1-208	ENST00000557702	HERVK_113	P61574	105 aa		5.19	□□□□□ -1.58
PABPN1-208	ENST00000557702	MRPL55	Q7Z7F7	128 aa	Known RBP	5.19	□□□□□ -1.58
PABPN1-208	ENST00000557702	KRTAP19-1	Q8IUB9	90 aa		5.19	□□□□□ -1.58
PABPN1-208	ENST00000557702	C3orf22	Q8N5N4	141 aa		5.19	□□□□□ -1.58
PABPN1-208	ENST00000557702	LINC00469	Q8N7U9	141 aa		5.19	□□□□□ -1.58
PABPN1-208	ENST00000557702	TP73-AS1	Q9UF72	201 aa		5.19	□□□□□ -1.58
PABPN1-208	ENST00000557702	CDKN2A-AS1	Q9UH64	79 aa		5.19	□□□□□ -1.58
PABPN1-208	ENST00000557702	NDUFA12	Q9UI09	145 aa		5.19	□□□□□ -1.58
PABPN1-208	ENST00000557702	IGHV3OR16-9	A0A0B4J2B5	98 aa		5.18	□□□□□ -1.58
PABPN1-208	ENST00000557702		E9PLD3	99 aa		5.18	□□□□□ -1.58
PABPN1-208	ENST00000557702		H3BRM9	83 aa		5.18	□□□□□ -1.58
PABPN1-208	ENST00000557702	PCOTH	Q58A44	107 aa		5.17	□□□□□ -1.58
PABPN1-208	ENST00000557702	COX6B2	Q6YFQ2	88 aa		5.17	□□□□□ -1.58
PABPN1-208	ENST00000557702	KRTAP13-1	Q8IUC0	172 aa		5.17	□□□□□ -1.58
PABPN1-208	ENST00000557702	LINC01561	Q8N1V8	128 aa		5.17	□□□□□ -1.58
PABPN1-208	ENST00000557702	RPL37AP8	A6NKH3	93 aa		5.16	□□□□□ -1.58
PABPN1-208	ENST00000557702	LEPROT	O15243	131 aa		5.16	□□□□□ -1.58
PABPN1-208	ENST00000557702	SPINK8	P0C7L1	97 aa		5.16	□□□□□ -1.58
PABPN1-208	ENST00000557702	CFC1	P0CG37	223 aa		5.16	□□□□□ -1.58
PABPN1-208	ENST00000557702	NMU	P48645	174 aa		5.16	□□□□□ -1.58
PABPN1-208	ENST00000557702	PRO1933	Q9H354	126 aa		5.16	□□□□□ -1.58
PABPN1-208	ENST00000557702	IGLV5-39	A0A0G2JS06	123 aa		5.15	□□□□□ -1.59
PABPN1-208	ENST00000557702	SMIM1	B2RUZ4	78 aa		5.15	□□□□□ -1.59
PABPN1-208	ENST00000557702	TSTD3	H0UI37	97 aa		5.15	□□□□□ -1.59
PABPN1-208	ENST00000557702	COX8A	P10176	69 aa		5.15	□□□□□ -1.59
PABPN1-208	ENST00000557702	KIAA0087	Q14695	138 aa		5.15	□□□□□ -1.59
PABPN1-208	ENST00000557702	PLEKHB2	Q96CS7	222 aa		5.15	□□□□□ -1.59
PABPN1-208	ENST00000557702	C14orf144	Q96I85	54 aa		5.15	□□□□□ -1.59
PABPN1-208	ENST00000557702	XAGE1A	Q9HD64	81 aa		5.15	□□□□□ -1.59
PABPN1-208	ENST00000557702		J3QQQ9	107 aa		5.14	□□□□□ -1.59

Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms