RNA–Protein interactions for RNA: ENST00000557685.5

EFCAB11-213, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 3

Gene EFCAB11, Length 698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-213ENST00000557685 UNQ5815/PRO19632Q6UWF5 114 aa0.72□□□□□ -2.29
EFCAB11-213ENST00000557685 Q6ZUT4 128 aa0.72□□□□□ -2.29
EFCAB11-213ENST00000557685 Q86TA4 180 aa0.72□□□□□ -2.29
EFCAB11-213ENST00000557685 C5orf56Q8N8D9 126 aa0.72□□□□□ -2.29
EFCAB11-213ENST00000557685 DPH3Q96FX2 82 aa0.72□□□□□ -2.29
EFCAB11-213ENST00000557685 TSC22D3Q99576 134 aa0.72□□□□□ -2.29
EFCAB11-213ENST00000557685 LINC00470Q9BZP3 86 aa0.72□□□□□ -2.29
EFCAB11-213ENST00000557685 SAR1AQ9NR31 198 aa0.72□□□□□ -2.29
EFCAB11-213ENST00000557685 PDCD11Q14690 1871 aaKnown RBP0.71□□□□□ -2.3
EFCAB11-213ENST00000557685 LPAP08519 4548 aa0.71□□□□□ -2.3
EFCAB11-213ENST00000557685 TRAV2A0A0B4J234 112 aa0.71□□□□□ -2.3
EFCAB11-213ENST00000557685 TRBV10-1A0A0K0K1A3 114 aa0.71□□□□□ -2.3
EFCAB11-213ENST00000557685 CLPSL1A2RUU4 121 aa0.71□□□□□ -2.3
EFCAB11-213ENST00000557685 DEFB108AA8MXU0 73 aa0.71□□□□□ -2.3
EFCAB11-213ENST00000557685 RRAS2P62070 204 aaPredicted RBP0.71□□□□□ -2.3
EFCAB11-213ENST00000557685 WFDC9Q8NEX5 89 aa0.71□□□□□ -2.3
EFCAB11-213ENST00000557685 PPDPFLQ8WWR9 84 aa0.71□□□□□ -2.3
EFCAB11-213ENST00000557685 NDUFA12Q9UI09 145 aa0.71□□□□□ -2.3
EFCAB11-213ENST00000557685 MYO7BQ6PIF6 2116 aa0.71□□□□□ -2.3
EFCAB11-213ENST00000557685 DSTQ03001 7570 aaKnown RBP0.71□□□□□ -2.3
EFCAB11-213ENST00000557685 FOCADQ5VW36 1801 aa0.71□□□□□ -2.3
EFCAB11-213ENST00000557685 LOC100130705A0A1B0GUX0 176 aa0.7□□□□□ -2.3
EFCAB11-213ENST00000557685 H3BQF6 201 aa0.7□□□□□ -2.3
EFCAB11-213ENST00000557685 ZNF56Q15929 161 aa0.7□□□□□ -2.3
EFCAB11-213ENST00000557685 WHAMMP3Q1A5X7 153 aa0.7□□□□□ -2.3
EFCAB11-213ENST00000557685 OR2T2Q6IF00 324 aa0.7□□□□□ -2.3
EFCAB11-213ENST00000557685 VSTM2AQ8TAG5 236 aa0.7□□□□□ -2.3
EFCAB11-213ENST00000557685 PLAC4Q8WY50 150 aa0.7□□□□□ -2.3
EFCAB11-213ENST00000557685 IFI27L1Q96BM0 104 aa0.7□□□□□ -2.3
EFCAB11-213ENST00000557685 DNAH8Q96JB1 4490 aa0.7□□□□□ -2.3
EFCAB11-213ENST00000557685 A0A0D9SG42 100 aa0.69□□□□□ -2.3
EFCAB11-213ENST00000557685 A0A1B0GV90 55 aa0.69□□□□□ -2.3
EFCAB11-213ENST00000557685 EFCAB10A6NFE3 127 aa0.69□□□□□ -2.3
EFCAB11-213ENST00000557685 PIRTP0C851 137 aa0.69□□□□□ -2.3
EFCAB11-213ENST00000557685 CAV3P56539 151 aa0.69□□□□□ -2.3
EFCAB11-213ENST00000557685 FXYD6P3P58550 94 aa0.69□□□□□ -2.3
EFCAB11-213ENST00000557685 NPC2P61916 151 aa0.69□□□□□ -2.3
EFCAB11-213ENST00000557685 EMX2Q04743 252 aa0.69□□□□□ -2.3
EFCAB11-213ENST00000557685 SPCS2Q15005 226 aa0.69□□□□□ -2.3
EFCAB11-213ENST00000557685 DEFB104AQ8WTQ1 72 aa0.69□□□□□ -2.3
EFCAB11-213ENST00000557685 TSKUQ8WUA8 353 aa0.69□□□□□ -2.3
EFCAB11-213ENST00000557685 TMEM191AQ9H0A3 160 aa0.69□□□□□ -2.3
EFCAB11-213ENST00000557685 TRAV12-2A0A075B6T6 113 aa0.68□□□□□ -2.3
EFCAB11-213ENST00000557685 HIST1H1DP16402 221 aaKnown RBP0.68□□□□□ -2.3
EFCAB11-213ENST00000557685 GUCA1AP43080 201 aaPredicted RBP0.68□□□□□ -2.3
EFCAB11-213ENST00000557685 SPINT3P49223 89 aa0.68□□□□□ -2.3
EFCAB11-213ENST00000557685 GNG11P61952 73 aa0.68□□□□□ -2.3
EFCAB11-213ENST00000557685 SCIMPQ6UWF3 145 aa0.68□□□□□ -2.3
EFCAB11-213ENST00000557685 ARL11Q969Q4 196 aa0.68□□□□□ -2.3
EFCAB11-213ENST00000557685 MUC5ACP98088 5654 aa0.68□□□□□ -2.3
EFCAB11-213ENST00000557685 MUC17Q685J3 4493 aa0.68□□□□□ -2.3
EFCAB11-213ENST00000557685 PVALEFA0A1B0GWK0 134 aa0.67□□□□□ -2.3
EFCAB11-213ENST00000557685 RPL13AP3Q6NVV1 102 aa0.67□□□□□ -2.3
EFCAB11-213ENST00000557685 C10orf99Q6UWK7 81 aa0.67□□□□□ -2.3
EFCAB11-213ENST00000557685 KCNRGQ8N5I3 272 aa0.67□□□□□ -2.3
EFCAB11-213ENST00000557685 LSM10Q969L4 123 aaKnown RBP0.67□□□□□ -2.3
EFCAB11-213ENST00000557685 PSMG3Q9BT73 122 aaPredicted RBP0.67□□□□□ -2.3
EFCAB11-213ENST00000557685 TMEM242Q9NWH2 141 aa0.67□□□□□ -2.3
EFCAB11-213ENST00000557685 MYH7P12883 1935 aa0.67□□□□□ -2.3
EFCAB11-213ENST00000557685 MIF4GDA9UHW6 222 aaKnown RBP0.66□□□□□ -2.3
EFCAB11-213ENST00000557685 CCDC179H3BU77 68 aa0.66□□□□□ -2.3
EFCAB11-213ENST00000557685 TNFP01375 233 aa0.66□□□□□ -2.3
EFCAB11-213ENST00000557685 SMR3BP02814 79 aaPredicted RBP0.66□□□□□ -2.3
EFCAB11-213ENST00000557685 MT1HL1P0DM35 61 aa0.66□□□□□ -2.3
EFCAB11-213ENST00000557685 ZNF137PP52743 207 aa0.66□□□□□ -2.3
EFCAB11-213ENST00000557685 UBE2G1P62253 170 aa0.66□□□□□ -2.3
EFCAB11-213ENST00000557685 GNGT1P63211 74 aa0.66□□□□□ -2.3
EFCAB11-213ENST00000557685 SEC11CQ9BY50 192 aa0.66□□□□□ -2.3
EFCAB11-213ENST00000557685 DNAJC13O75165 2243 aa0.66□□□□□ -2.3
EFCAB11-213ENST00000557685 MYH9P35579 1960 aaKnown RBP0.66□□□□□ -2.3
EFCAB11-213ENST00000557685 TRAV12-3A0A0B4J271 114 aa0.65□□□□□ -2.31
EFCAB11-213ENST00000557685 FXYD1O00168 92 aa0.65□□□□□ -2.31
EFCAB11-213ENST00000557685 DLEU1O43261 78 aa0.65□□□□□ -2.31
EFCAB11-213ENST00000557685 IL5P05113 134 aa0.65□□□□□ -2.31
EFCAB11-213ENST00000557685 ELOF1P60002 83 aaKnown RBP0.65□□□□□ -2.31
EFCAB11-213ENST00000557685 C9orf116Q5BN46 136 aaPredicted RBP0.65□□□□□ -2.31
EFCAB11-213ENST00000557685 MEIG1Q5JSS6 88 aa0.65□□□□□ -2.31
EFCAB11-213ENST00000557685 SPANXN1Q5VSR9 72 aa0.65□□□□□ -2.31
EFCAB11-213ENST00000557685 SLC48A1Q6P1K1 146 aa0.65□□□□□ -2.31
EFCAB11-213ENST00000557685 NDUFA11Q86Y39 141 aa0.65□□□□□ -2.31
EFCAB11-213ENST00000557685 C10orf82Q8WW14 230 aa0.65□□□□□ -2.31
EFCAB11-213ENST00000557685 C1orf54Q8WWF1 131 aa0.65□□□□□ -2.31
EFCAB11-213ENST00000557685 TMEM141Q96I45 108 aa0.65□□□□□ -2.31
EFCAB11-213ENST00000557685 AGPAT4-IT1Q9H0P7 198 aa0.65□□□□□ -2.31
EFCAB11-213ENST00000557685 LINC00846Q9NV44 126 aa0.65□□□□□ -2.31
EFCAB11-213ENST00000557685 CCDC167Q9P0B6 97 aa0.65□□□□□ -2.31
EFCAB11-213ENST00000557685 A0A087WTM6 91 aa0.64□□□□□ -2.31
EFCAB11-213ENST00000557685 TEX49A0A1B0GTD5 131 aa0.64□□□□□ -2.31
EFCAB11-213ENST00000557685 LINC00587B1AMM8 73 aa0.64□□□□□ -2.31
EFCAB11-213ENST00000557685 FAM25AB3EWG3 89 aa0.64□□□□□ -2.31
EFCAB11-213ENST00000557685 FAM25CB3EWG5 89 aa0.64□□□□□ -2.31
EFCAB11-213ENST00000557685 FAM25GB3EWG6 89 aa0.64□□□□□ -2.31
EFCAB11-213ENST00000557685 APOC4-APOC2K7ER74 178 aa0.64□□□□□ -2.31
EFCAB11-213ENST00000557685 APOC2P02655 101 aa0.64□□□□□ -2.31
EFCAB11-213ENST00000557685 SNRPFP62306 86 aaKnown RBP0.64□□□□□ -2.31
EFCAB11-213ENST00000557685 KLKP1Q107X0 134 aa0.64□□□□□ -2.31
EFCAB11-213ENST00000557685 ZNF720Q7Z2F6 126 aa0.64□□□□□ -2.31
EFCAB11-213ENST00000557685 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.64□□□□□ -2.31
EFCAB11-213ENST00000557685 BPESC1Q9GZL8 116 aa0.64□□□□□ -2.31
EFCAB11-213ENST00000557685 FAIMQ9NVQ4 179 aa0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms