RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 RPL18AQ02543 176 aaKnown RBP11.95□□□□□ -0.5
XRCC3-218ENST00000557439 XAGE1AQ9HD64 81 aa11.95□□□□□ -0.5
XRCC3-218ENST00000557439 ANK2Q01484 3957 aa11.95□□□□□ -0.5
XRCC3-218ENST00000557439 TENM3Q9P273 2699 aa11.94□□□□□ -0.5
XRCC3-218ENST00000557439 OXLD1Q5BKU9 147 aa11.94□□□□□ -0.5
XRCC3-218ENST00000557439 LYPD5Q6UWN5 251 aa11.92□□□□□ -0.5
XRCC3-218ENST00000557439 WFDC10BQ8IUB3 73 aa11.92□□□□□ -0.5
XRCC3-218ENST00000557439 LINC00167Q96N53 147 aa11.92□□□□□ -0.5
XRCC3-218ENST00000557439 HIGD2BQ4VC39 106 aa11.91□□□□□ -0.5
XRCC3-218ENST00000557439 PRR34Q9NV39 138 aa11.91□□□□□ -0.5
XRCC3-218ENST00000557439 WFDC9Q8NEX5 89 aa11.9□□□□□ -0.5
XRCC3-218ENST00000557439 C6orf48Q9UBA6 75 aa11.9□□□□□ -0.5
XRCC3-218ENST00000557439 CCKP06307 115 aa11.88□□□□□ -0.51
XRCC3-218ENST00000557439 LINC00575Q6W349 94 aa11.88□□□□□ -0.51
XRCC3-218ENST00000557439 A0A0J9YWU9 116 aa11.86□□□□□ -0.51
XRCC3-218ENST00000557439 TMEM256-PLSCR3K7ERE1 68 aa11.86□□□□□ -0.51
XRCC3-218ENST00000557439 STAB1Q9NY15 2570 aa11.86□□□□□ -0.51
XRCC3-218ENST00000557439 TRBV10-3A0A0K0K1G6 114 aa11.86□□□□□ -0.51
XRCC3-218ENST00000557439 Q6ZTC4 211 aa11.86□□□□□ -0.51
XRCC3-218ENST00000557439 M0R2N4 97 aa11.85□□□□□ -0.51
XRCC3-218ENST00000557439 KRTAP10-11P60412 298 aa11.85□□□□□ -0.51
XRCC3-218ENST00000557439 KPRPQ5T749 579 aaPredicted RBP11.85□□□□□ -0.51
XRCC3-218ENST00000557439 F8P00451 2351 aa11.85□□□□□ -0.51
XRCC3-218ENST00000557439 C9orf153Q5TBE3 101 aa11.85□□□□□ -0.51
XRCC3-218ENST00000557439 Q6JHZ5 121 aa11.85□□□□□ -0.51
XRCC3-218ENST00000557439 A0A1B0GX51 115 aa11.84□□□□□ -0.51
XRCC3-218ENST00000557439 hADV29S1A0JD25 119 aa11.84□□□□□ -0.51
XRCC3-218ENST00000557439 SMIM20Q8N5G0 67 aa11.84□□□□□ -0.51
XRCC3-218ENST00000557439 C3orf22Q8N5N4 141 aa11.84□□□□□ -0.51
XRCC3-218ENST00000557439 IGLV6-57P01721 117 aa11.83□□□□□ -0.52
XRCC3-218ENST00000557439 HIST1H4AP62805 103 aaKnown RBP11.83□□□□□ -0.52
XRCC3-218ENST00000557439 JMJD7-PLA2G4BH0Y9G9 81 aa11.82□□□□□ -0.52
XRCC3-218ENST00000557439 Q6ZQY7 126 aa11.82□□□□□ -0.52
XRCC3-218ENST00000557439 C2orf48Q96LS8 159 aa11.82□□□□□ -0.52
XRCC3-218ENST00000557439 LAMTOR3Q9UHA4 124 aa11.81□□□□□ -0.52
XRCC3-218ENST00000557439 FBN1P35555 2871 aaKnown RBP11.81□□□□□ -0.52
XRCC3-218ENST00000557439 CYSTM1Q9H1C7 97 aa11.81□□□□□ -0.52
XRCC3-218ENST00000557439 CAMK2N2Q96S95 79 aa11.8□□□□□ -0.52
XRCC3-218ENST00000557439 ZNF561-AS1K7EIQ3 104 aa11.79□□□□□ -0.52
XRCC3-218ENST00000557439 FAM19A1Q7Z5A9 133 aa11.79□□□□□ -0.52
XRCC3-218ENST00000557439 FLNBO75369 2602 aaKnown RBP11.79□□□□□ -0.52
XRCC3-218ENST00000557439 UQCRQO14949 82 aa11.79□□□□□ -0.52
XRCC3-218ENST00000557439 NOTCH1P46531 2555 aa11.79□□□□□ -0.52
XRCC3-218ENST00000557439 ESRGQ1W209 222 aa11.78□□□□□ -0.52
XRCC3-218ENST00000557439 Q6ZRU5 148 aa11.78□□□□□ -0.52
XRCC3-218ENST00000557439 TRAV23DV6A0A075B6W5 121 aa11.78□□□□□ -0.52
XRCC3-218ENST00000557439 COX7CP15954 63 aa11.78□□□□□ -0.52
XRCC3-218ENST00000557439 KRTAP26-1Q6PEX3 210 aa11.77□□□□□ -0.52
XRCC3-218ENST00000557439 MAST4O15021 2626 aa11.77□□□□□ -0.52
XRCC3-218ENST00000557439 RBM3P98179 157 aaKnown RBP11.76□□□□□ -0.53
XRCC3-218ENST00000557439 GVQW2A0A096LPI5 108 aaPredicted RBP11.76□□□□□ -0.53
XRCC3-218ENST00000557439 USP17L23D6RBM5 183 aa11.76□□□□□ -0.53
XRCC3-218ENST00000557439 ATOX1O00244 68 aa11.76□□□□□ -0.53
XRCC3-218ENST00000557439 WIPF1O43516 503 aa11.76□□□□□ -0.53
XRCC3-218ENST00000557439 C15orf56Q8N910 161 aa11.76□□□□□ -0.53
XRCC3-218ENST00000557439 CMYA5Q8N3K9 4069 aa11.75□□□□□ -0.53
XRCC3-218ENST00000557439 Q6ZQT0 140 aa11.75□□□□□ -0.53
XRCC3-218ENST00000557439 DIRC1Q969H9 104 aa11.74□□□□□ -0.53
XRCC3-218ENST00000557439 ZNF73O43830 326 aaPredicted RBP11.74□□□□□ -0.53
XRCC3-218ENST00000557439 VPREB1P12018 145 aa11.73□□□□□ -0.53
XRCC3-218ENST00000557439 IGKV2D-24A0A075B6R9 120 aa11.72□□□□□ -0.53
XRCC3-218ENST00000557439 MUC7Q8TAX7 377 aa11.7□□□□□ -0.54
XRCC3-218ENST00000557439 UBL5Q9BZL1 73 aa11.7□□□□□ -0.54
XRCC3-218ENST00000557439 COX7BP24311 80 aa11.7□□□□□ -0.54
XRCC3-218ENST00000557439 Q6ZRP5 223 aa11.7□□□□□ -0.54
XRCC3-218ENST00000557439 PRB2P02812 416 aaPredicted RBP11.68□□□□□ -0.54
XRCC3-218ENST00000557439 C1orf43Q9BWL3 253 aa11.68□□□□□ -0.54
XRCC3-218ENST00000557439 DEFB131BA0A096LNP1 70 aa11.68□□□□□ -0.54
XRCC3-218ENST00000557439 DSCR8Q96T75 97 aa11.68□□□□□ -0.54
XRCC3-218ENST00000557439 HAMPP81172 84 aa11.67□□□□□ -0.54
XRCC3-218ENST00000557439 EGFEM1PQ0D2K5 195 aa11.67□□□□□ -0.54
XRCC3-218ENST00000557439 KRTAP24-1Q3LI83 254 aa11.67□□□□□ -0.54
XRCC3-218ENST00000557439 SERP2Q8N6R1 65 aa11.67□□□□□ -0.54
XRCC3-218ENST00000557439 ELOF1P60002 83 aaKnown RBP11.66□□□□□ -0.54
XRCC3-218ENST00000557439 UPK3BQ9BT76 320 aa11.66□□□□□ -0.54
XRCC3-218ENST00000557439 LOC110117498A0A087WWA1 95 aa11.66□□□□□ -0.54
XRCC3-218ENST00000557439 NDUFC2-KCTD14E9PQ53 114 aa11.66□□□□□ -0.54
XRCC3-218ENST00000557439 CRYGAP11844 174 aa11.66□□□□□ -0.54
XRCC3-218ENST00000557439 GHRHP01286 108 aa11.65□□□□□ -0.54
XRCC3-218ENST00000557439 SCXQ7RTU7 201 aa11.65□□□□□ -0.55
XRCC3-218ENST00000557439 H3BNG1 76 aa11.64□□□□□ -0.55
XRCC3-218ENST00000557439 Q6ZVQ6 151 aa11.64□□□□□ -0.55
XRCC3-218ENST00000557439 C11orf45Q8TAV5 145 aa11.64□□□□□ -0.55
XRCC3-218ENST00000557439 LOC107984640A0A0U1RRK4 108 aa11.63□□□□□ -0.55
XRCC3-218ENST00000557439 M0R378 163 aa11.63□□□□□ -0.55
XRCC3-218ENST00000557439 LINC01547P58512 204 aaPredicted RBP11.63□□□□□ -0.55
XRCC3-218ENST00000557439 CASC10Q5T4H9 136 aa11.62□□□□□ -0.55
XRCC3-218ENST00000557439 SERTAD4-AS1Q5TG53 156 aa11.62□□□□□ -0.55
XRCC3-218ENST00000557439 ATP5EP2Q5VTU8 51 aa11.61□□□□□ -0.55
XRCC3-218ENST00000557439 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.61□□□□□ -0.55
XRCC3-218ENST00000557439 SYCNQ0VAF6 134 aa11.6□□□□□ -0.55
XRCC3-218ENST00000557439 LINC01556Q5JQF7 62 aa11.6□□□□□ -0.55
XRCC3-218ENST00000557439 LINC00528Q8N1L1 170 aa11.6□□□□□ -0.55
XRCC3-218ENST00000557439 NBEAL1Q6ZS30 2694 aa11.59□□□□□ -0.55
XRCC3-218ENST00000557439 TRBV7-4A0A0J9YYF1 115 aa11.58□□□□□ -0.56
XRCC3-218ENST00000557439 DEFB105AQ8NG35 78 aa11.58□□□□□ -0.56
XRCC3-218ENST00000557439 BAHCC1Q9P281 2608 aa11.57□□□□□ -0.56
XRCC3-218ENST00000557439 FAM168BA1KXE4 195 aa11.57□□□□□ -0.56
XRCC3-218ENST00000557439 COL6A5A8TX70 2615 aa11.57□□□□□ -0.56
XRCC3-218ENST00000557439 TRAV10A0A0B4J240 114 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms