RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 NDUFA4O00483 81 aa2.1□□□□□ -2.07
PRPF39-210ENST00000556718 PRM2P04554 102 aa2.1□□□□□ -2.07
PRPF39-210ENST00000556718 COX17Q14061 63 aa2.1□□□□□ -2.07
PRPF39-210ENST00000556718 DEFB114Q30KQ6 69 aa2.1□□□□□ -2.07
PRPF39-210ENST00000556718 USMG5Q96IX5 58 aa2.1□□□□□ -2.07
PRPF39-210ENST00000556718 FAM215AQ9Y5M1 114 aa2.1□□□□□ -2.07
PRPF39-210ENST00000556718 MYO7AQ13402 2215 aa2.1□□□□□ -2.07
PRPF39-210ENST00000556718 LTBP2Q14767 1821 aa2.1□□□□□ -2.07
PRPF39-210ENST00000556718 ETDCA0A1B0GVM5 59 aa2.09□□□□□ -2.07
PRPF39-210ENST00000556718 A8MUN3 132 aa2.09□□□□□ -2.07
PRPF39-210ENST00000556718 PRB4P10163 310 aaPredicted RBP2.09□□□□□ -2.07
PRPF39-210ENST00000556718 CCL18P55774 89 aa2.09□□□□□ -2.07
PRPF39-210ENST00000556718 DEFB119Q8N690 84 aa2.09□□□□□ -2.07
PRPF39-210ENST00000556718 CDC42SE1Q9NRR8 79 aa2.09□□□□□ -2.07
PRPF39-210ENST00000556718 ESPL1Q14674 2120 aa2.09□□□□□ -2.08
PRPF39-210ENST00000556718 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.08□□□□□ -2.08
PRPF39-210ENST00000556718 A6NN06 94 aa2.08□□□□□ -2.08
PRPF39-210ENST00000556718 H3BUA1 57 aa2.08□□□□□ -2.08
PRPF39-210ENST00000556718 COX7BP24311 80 aa2.08□□□□□ -2.08
PRPF39-210ENST00000556718 C9orf116Q5BN46 136 aaPredicted RBP2.08□□□□□ -2.08
PRPF39-210ENST00000556718 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.08□□□□□ -2.08
PRPF39-210ENST00000556718 LINC00575Q6W349 94 aa2.08□□□□□ -2.08
PRPF39-210ENST00000556718 CASC2Q6XLA1 102 aa2.08□□□□□ -2.08
PRPF39-210ENST00000556718 LINC00467Q9BRT7 94 aa2.08□□□□□ -2.08
PRPF39-210ENST00000556718 PRR15LQ9BU68 103 aa2.08□□□□□ -2.08
PRPF39-210ENST00000556718 TOMM7Q9P0U1 55 aa2.08□□□□□ -2.08
PRPF39-210ENST00000556718 DSCAMO60469 2012 aa2.08□□□□□ -2.08
PRPF39-210ENST00000556718 TRGV2A0A075B6R0 118 aa2.07□□□□□ -2.08
PRPF39-210ENST00000556718 TRGV4A0A0C4DH28 118 aa2.07□□□□□ -2.08
PRPF39-210ENST00000556718 C3orf84H3BNL1 204 aa2.07□□□□□ -2.08
PRPF39-210ENST00000556718 COX6A2Q02221 97 aa2.07□□□□□ -2.08
PRPF39-210ENST00000556718 LINC01554Q52M75 96 aa2.07□□□□□ -2.08
PRPF39-210ENST00000556718 Q6ZTI0 123 aa2.07□□□□□ -2.08
PRPF39-210ENST00000556718 DEFB104AQ8WTQ1 72 aa2.07□□□□□ -2.08
PRPF39-210ENST00000556718 LINC00208Q96KT6 92 aa2.07□□□□□ -2.08
PRPF39-210ENST00000556718 Q9BRP9 147 aa2.07□□□□□ -2.08
PRPF39-210ENST00000556718 RHPN1-AS1Q9BWJ2 59 aa2.07□□□□□ -2.08
PRPF39-210ENST00000556718 WFDC10AQ9H1F0 79 aa2.07□□□□□ -2.08
PRPF39-210ENST00000556718 INTS1Q8N201 2190 aaKnown RBP2.07□□□□□ -2.08
PRPF39-210ENST00000556718 DIDO1Q9BTC0 2240 aaKnown RBP2.07□□□□□ -2.08
PRPF39-210ENST00000556718 SDK2Q58EX2 2172 aa2.06□□□□□ -2.08
PRPF39-210ENST00000556718 ZNF407Q9C0G0 2248 aa2.06□□□□□ -2.08
PRPF39-210ENST00000556718 LCE6AA0A183 80 aa2.06□□□□□ -2.08
PRPF39-210ENST00000556718 LOC101927531A0A1B0GV80 90 aa2.06□□□□□ -2.08
PRPF39-210ENST00000556718 C19orf84I3L1E1 186 aa2.06□□□□□ -2.08
PRPF39-210ENST00000556718 CCL5P13501 91 aa2.06□□□□□ -2.08
PRPF39-210ENST00000556718 Q5VV11 94 aa2.06□□□□□ -2.08
PRPF39-210ENST00000556718 RETNLBQ9BQ08 111 aa2.06□□□□□ -2.08
PRPF39-210ENST00000556718 CDC42SE2Q9NRR3 84 aa2.06□□□□□ -2.08
PRPF39-210ENST00000556718 PLXNB1O43157 2135 aa2.06□□□□□ -2.08
PRPF39-210ENST00000556718 RP1P56715 2156 aa2.05□□□□□ -2.08
PRPF39-210ENST00000556718 Q8IZM0 81 aa2.05□□□□□ -2.08
PRPF39-210ENST00000556718 RTTNQ86VV8 2226 aa2.05□□□□□ -2.08
PRPF39-210ENST00000556718 PCNX2A6NKB5 2137 aa2.04□□□□□ -2.08
PRPF39-210ENST00000556718 MSMBP08118 114 aa2.04□□□□□ -2.08
PRPF39-210ENST00000556718 KNTC1P50748 2209 aa2.04□□□□□ -2.08
PRPF39-210ENST00000556718 SPAG11BQ08648 103 aa2.04□□□□□ -2.08
PRPF39-210ENST00000556718 ZCCHC13Q8WW36 166 aaKnown RBP2.04□□□□□ -2.08
PRPF39-210ENST00000556718 MED12Q93074 2177 aa2.03□□□□□ -2.08
PRPF39-210ENST00000556718 IGKV3-7A0A075B6H7 116 aa2.03□□□□□ -2.08
PRPF39-210ENST00000556718 HTN1P15515 57 aa2.03□□□□□ -2.08
PRPF39-210ENST00000556718 SPINK13Q1W4C9 94 aa2.03□□□□□ -2.08
PRPF39-210ENST00000556718 Q6ZQY7 126 aa2.03□□□□□ -2.08
PRPF39-210ENST00000556718 FDCSPQ8NFU4 85 aa2.03□□□□□ -2.08
PRPF39-210ENST00000556718 LINC01558Q9Y6Z2 57 aa2.03□□□□□ -2.08
PRPF39-210ENST00000556718 FREM1Q5H8C1 2179 aa2.02□□□□□ -2.09
PRPF39-210ENST00000556718 U3KQA8 63 aa2.02□□□□□ -2.09
PRPF39-210ENST00000556718 POLEQ07864 2286 aa2.02□□□□□ -2.09
PRPF39-210ENST00000556718 TNCP24821 2201 aa2.02□□□□□ -2.09
PRPF39-210ENST00000556718 HIVEP2P31629 2446 aa2.01□□□□□ -2.09
PRPF39-210ENST00000556718 LINC00959A0A1B0GUT2 108 aa2.01□□□□□ -2.09
PRPF39-210ENST00000556718 G3V318 75 aa2.01□□□□□ -2.09
PRPF39-210ENST00000556718 PRB3Q04118 309 aaPredicted RBP2.01□□□□□ -2.09
PRPF39-210ENST00000556718 C5orf56Q8N8D9 126 aa2.01□□□□□ -2.09
PRPF39-210ENST00000556718 KCNQ1DNQ9H478 68 aa2.01□□□□□ -2.09
PRPF39-210ENST00000556718 A0A0C4DFX4 3053 aa2.01□□□□□ -2.09
PRPF39-210ENST00000556718 TRGV1A0A0A0MS02 117 aa2□□□□□ -2.09
PRPF39-210ENST00000556718 IGKV3OR2-268A0A0C4DH90 116 aa2□□□□□ -2.09
PRPF39-210ENST00000556718 H0Y9P7 68 aa2□□□□□ -2.09
PRPF39-210ENST00000556718 CNBPP62633 177 aaKnown RBP2□□□□□ -2.09
PRPF39-210ENST00000556718 DEFB112Q30KQ8 113 aa2□□□□□ -2.09
PRPF39-210ENST00000556718 SPAG11AQ6PDA7 123 aa2□□□□□ -2.09
PRPF39-210ENST00000556718 PRRC2BQ5JSZ5 2229 aaKnown RBP2□□□□□ -2.09
PRPF39-210ENST00000556718 PI4KAP42356 2102 aa2□□□□□ -2.09
PRPF39-210ENST00000556718 ZGRF1Q86YA3 2104 aa2□□□□□ -2.09
PRPF39-210ENST00000556718 ARFGEF3Q5TH69 2177 aa1.99□□□□□ -2.09
PRPF39-210ENST00000556718 A0A096LNT2 108 aa1.99□□□□□ -2.09
PRPF39-210ENST00000556718 A8MTW9 85 aa1.99□□□□□ -2.09
PRPF39-210ENST00000556718 PRB1P04280 392 aa1.99□□□□□ -2.09
PRPF39-210ENST00000556718 DEFB1P60022 68 aa1.99□□□□□ -2.09
PRPF39-210ENST00000556718 COA5Q86WW8 74 aa1.99□□□□□ -2.09
PRPF39-210ENST00000556718 TP53AIP1Q9HCN2 124 aa1.99□□□□□ -2.09
PRPF39-210ENST00000556718 DOCK10Q96BY6 2186 aa1.98□□□□□ -2.09
PRPF39-210ENST00000556718 DEFB131AP59861 70 aa1.98□□□□□ -2.09
PRPF39-210ENST00000556718 PRO2289Q9P1D8 64 aa1.98□□□□□ -2.09
PRPF39-210ENST00000556718 NAV3Q8IVL0 2385 aa1.97□□□□□ -2.09
PRPF39-210ENST00000556718 IGLV5-48A0A075B6I7 105 aa1.97□□□□□ -2.09
PRPF39-210ENST00000556718 GVQW2A0A096LPI5 108 aaPredicted RBP1.97□□□□□ -2.09
PRPF39-210ENST00000556718 A0A0G2JQZ4 141 aa1.97□□□□□ -2.09
PRPF39-210ENST00000556718 LYNX1G3V0Z9 82 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms