RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 FP248Q71RG6 208 aaPredicted RBP8.08□□□□□ -1.12
CHMP4BP1-201ENST00000556017 C11orf86A6NJI1 115 aa8.07□□□□□ -1.12
CHMP4BP1-201ENST00000556017 DAND5Q8N907 189 aa8.07□□□□□ -1.12
CHMP4BP1-201ENST00000556017 KRTAP4-16G5E9R7 235 aaPredicted RBP8.06□□□□□ -1.12
CHMP4BP1-201ENST00000556017 FA2HQ7L5A8 372 aa8.06□□□□□ -1.12
CHMP4BP1-201ENST00000556017 SPRR1AP35321 89 aa8.05□□□□□ -1.12
CHMP4BP1-201ENST00000556017 CLLU1Q5K131 121 aa8.05□□□□□ -1.12
CHMP4BP1-201ENST00000556017 Q8NBF4 154 aa8.05□□□□□ -1.12
CHMP4BP1-201ENST00000556017 TMEM218A2RU14 115 aa8.04□□□□□ -1.12
CHMP4BP1-201ENST00000556017 PMCHL1Q16048 86 aa8.03□□□□□ -1.12
CHMP4BP1-201ENST00000556017 LCE2CQ5TA81 110 aa8.03□□□□□ -1.12
CHMP4BP1-201ENST00000556017 C18orf32Q8TCD1 76 aa8.03□□□□□ -1.12
CHMP4BP1-201ENST00000556017 NDUFA6P56556 154 aa8.02□□□□□ -1.13
CHMP4BP1-201ENST00000556017 FABP9Q0Z7S8 132 aa8.02□□□□□ -1.13
CHMP4BP1-201ENST00000556017 SMCO4Q9NRQ5 59 aa8.02□□□□□ -1.13
CHMP4BP1-201ENST00000556017 LINC00483Q53H64 154 aa8.01□□□□□ -1.13
CHMP4BP1-201ENST00000556017 SMCR5Q8TEV8 140 aa8.01□□□□□ -1.13
CHMP4BP1-201ENST00000556017 A0A0U1RRA0 63 aa8□□□□□ -1.13
CHMP4BP1-201ENST00000556017 KRTAP19-2Q3LHN2 52 aa8□□□□□ -1.13
CHMP4BP1-201ENST00000556017 TMEM170BQ5T4T1 132 aa8□□□□□ -1.13
CHMP4BP1-201ENST00000556017 LINC00337Q8N6G1 96 aa8□□□□□ -1.13
CHMP4BP1-201ENST00000556017 KCNQ1DNQ9H478 68 aa8□□□□□ -1.13
CHMP4BP1-201ENST00000556017 PRYO14603 147 aa7.99□□□□□ -1.13
CHMP4BP1-201ENST00000556017 SPINK1P00995 79 aa7.99□□□□□ -1.13
CHMP4BP1-201ENST00000556017 HBDP02042 147 aa7.99□□□□□ -1.13
CHMP4BP1-201ENST00000556017 LINC00614P0C842 121 aa7.99□□□□□ -1.13
CHMP4BP1-201ENST00000556017 LINC00158P58513 81 aa7.99□□□□□ -1.13
CHMP4BP1-201ENST00000556017 COX19Q49B96 90 aa7.99□□□□□ -1.13
CHMP4BP1-201ENST00000556017 UQCC3Q6UW78 93 aa7.99□□□□□ -1.13
CHMP4BP1-201ENST00000556017 BAGE3Q86Y29 109 aa7.99□□□□□ -1.13
CHMP4BP1-201ENST00000556017 Q8N377 158 aa7.99□□□□□ -1.13
CHMP4BP1-201ENST00000556017 SEC11CQ9BY50 192 aa7.99□□□□□ -1.13
CHMP4BP1-201ENST00000556017 TMEM223A0PJW6 202 aa7.98□□□□□ -1.13
CHMP4BP1-201ENST00000556017 ERC2-IT1O76042 136 aa7.98□□□□□ -1.13
CHMP4BP1-201ENST00000556017 SMIM13P0DJ93 91 aa7.98□□□□□ -1.13
CHMP4BP1-201ENST00000556017 S100PP25815 95 aa7.98□□□□□ -1.13
CHMP4BP1-201ENST00000556017 LINC01547P58512 204 aaPredicted RBP7.98□□□□□ -1.13
CHMP4BP1-201ENST00000556017 IFITM2Q01629 132 aa7.98□□□□□ -1.13
CHMP4BP1-201ENST00000556017 SFTA2Q6UW10 78 aa7.98□□□□□ -1.13
CHMP4BP1-201ENST00000556017 ZNF706Q9Y5V0 76 aaPredicted RBP7.98□□□□□ -1.13
CHMP4BP1-201ENST00000556017 C4orf48Q5BLP8 95 aa7.97□□□□□ -1.13
CHMP4BP1-201ENST00000556017 C10orf91Q5T1B1 145 aa7.97□□□□□ -1.13
CHMP4BP1-201ENST00000556017 CRCT1Q9UGL9 99 aa7.97□□□□□ -1.13
CHMP4BP1-201ENST00000556017 TRBV10-3A0A0K0K1G6 114 aa7.96□□□□□ -1.14
CHMP4BP1-201ENST00000556017 NCR3O14931 201 aa7.96□□□□□ -1.14
CHMP4BP1-201ENST00000556017 SEC61BP60468 96 aaKnown RBP7.95□□□□□ -1.14
CHMP4BP1-201ENST00000556017 XP32Q5T750 250 aa7.95□□□□□ -1.14
CHMP4BP1-201ENST00000556017 BOD1L2Q8IYS8 172 aa7.95□□□□□ -1.14
CHMP4BP1-201ENST00000556017 FSIP2Q5CZC0 6907 aa7.94□□□□□ -1.14
CHMP4BP1-201ENST00000556017 B5MCH6 92 aa7.94□□□□□ -1.14
CHMP4BP1-201ENST00000556017 RPS29P62273 56 aaKnown RBP7.94□□□□□ -1.14
CHMP4BP1-201ENST00000556017 MIR7-3HGQ8N6C7 128 aa7.94□□□□□ -1.14
CHMP4BP1-201ENST00000556017 Q9BRP9 147 aa7.94□□□□□ -1.14
CHMP4BP1-201ENST00000556017 CHTOPQ9Y3Y2 248 aaKnown RBP7.94□□□□□ -1.14
CHMP4BP1-201ENST00000556017 MOBPQ13875 183 aa7.92□□□□□ -1.14
CHMP4BP1-201ENST00000556017 GAGE2AQ6NT46 116 aa7.92□□□□□ -1.14
CHMP4BP1-201ENST00000556017 TRAV12-1A0A0B4J245 112 aa7.91□□□□□ -1.14
CHMP4BP1-201ENST00000556017 ETDCA0A1B0GVM5 59 aa7.91□□□□□ -1.14
CHMP4BP1-201ENST00000556017 RPS10P5Q9NQ39 176 aa7.91□□□□□ -1.14
CHMP4BP1-201ENST00000556017 TRAPPC1Q9Y5R8 145 aa7.91□□□□□ -1.14
CHMP4BP1-201ENST00000556017 IGLV9-49A0A0B4J1Y8 123 aa7.9□□□□□ -1.14
CHMP4BP1-201ENST00000556017 LOC107984156A0A0G2JMH3 177 aa7.9□□□□□ -1.14
CHMP4BP1-201ENST00000556017 RHEBQ15382 184 aa7.9□□□□□ -1.14
CHMP4BP1-201ENST00000556017 SSBP3-AS1Q7Z2R9 100 aa7.9□□□□□ -1.14
CHMP4BP1-201ENST00000556017 ARL17AQ8IVW1 177 aa7.9□□□□□ -1.14
CHMP4BP1-201ENST00000556017 TSPEAR-AS2P59090 65 aa7.89□□□□□ -1.15
CHMP4BP1-201ENST00000556017 MEIG1Q5JSS6 88 aa7.88□□□□□ -1.15
CHMP4BP1-201ENST00000556017 HERV-K104P63124 156 aa7.87□□□□□ -1.15
CHMP4BP1-201ENST00000556017 MT1HP80294 61 aa7.87□□□□□ -1.15
CHMP4BP1-201ENST00000556017 Q6ZRX8 168 aa7.87□□□□□ -1.15
CHMP4BP1-201ENST00000556017 IFI27L1Q96BM0 104 aa7.87□□□□□ -1.15
CHMP4BP1-201ENST00000556017 NDUFA12Q9UI09 145 aa7.87□□□□□ -1.15
CHMP4BP1-201ENST00000556017 SLC25A20O43772 301 aa7.86□□□□□ -1.15
CHMP4BP1-201ENST00000556017 COMMD7Q86VX2 200 aa7.86□□□□□ -1.15
CHMP4BP1-201ENST00000556017 FAM19A2Q8N3H0 131 aa7.86□□□□□ -1.15
CHMP4BP1-201ENST00000556017 YPEL4Q96NS1 127 aa7.85□□□□□ -1.15
CHMP4BP1-201ENST00000556017 TRBV10-2A0A0K0K1G8 114 aa7.84□□□□□ -1.15
CHMP4BP1-201ENST00000556017 EIF4EBP3O60516 100 aaPredicted RBP7.84□□□□□ -1.15
CHMP4BP1-201ENST00000556017 ATP6V1G1O75348 118 aa7.84□□□□□ -1.15
CHMP4BP1-201ENST00000556017 IGLV6-57P01721 117 aa7.84□□□□□ -1.15
CHMP4BP1-201ENST00000556017 DDTP30046 118 aa7.84□□□□□ -1.15
CHMP4BP1-201ENST00000556017 MYMXA0A1B0GTQ4 84 aa7.82□□□□□ -1.16
CHMP4BP1-201ENST00000556017 ST20-AS1Q8NBB2 130 aa7.82□□□□□ -1.16
CHMP4BP1-201ENST00000556017 CHCHD1Q96BP2 118 aaKnown RBP7.82□□□□□ -1.16
CHMP4BP1-201ENST00000556017 LORP23490 312 aaPredicted RBP7.81□□□□□ -1.16
CHMP4BP1-201ENST00000556017 SOSTDC1Q6X4U4 206 aa7.81□□□□□ -1.16
CHMP4BP1-201ENST00000556017 FLGP20930 4061 aaPredicted RBP7.81□□□□□ -1.16
CHMP4BP1-201ENST00000556017 LINC00587B1AMM8 73 aa7.8□□□□□ -1.16
CHMP4BP1-201ENST00000556017 LINC00310P59036 64 aa7.79□□□□□ -1.16
CHMP4BP1-201ENST00000556017 PCOTHQ58A44 107 aa7.79□□□□□ -1.16
CHMP4BP1-201ENST00000556017 MAP1LC3CQ9BXW4 147 aa7.79□□□□□ -1.16
CHMP4BP1-201ENST00000556017 SPANXB1Q9NS25 103 aaPredicted RBP7.79□□□□□ -1.16
CHMP4BP1-201ENST00000556017 LEPROTO15243 131 aa7.78□□□□□ -1.16
CHMP4BP1-201ENST00000556017 NDUFC2O95298 119 aa7.78□□□□□ -1.16
CHMP4BP1-201ENST00000556017 J3QQQ9 107 aa7.76□□□□□ -1.17
CHMP4BP1-201ENST00000556017 KRTAP10-6P60371 365 aaPredicted RBP7.76□□□□□ -1.17
CHMP4BP1-201ENST00000556017 S100A12P80511 92 aa7.76□□□□□ -1.17
CHMP4BP1-201ENST00000556017 ADAMTSL4-AS1Q5T5F5 129 aa7.76□□□□□ -1.17
CHMP4BP1-201ENST00000556017 C9orf153Q5TBE3 101 aa7.76□□□□□ -1.17
CHMP4BP1-201ENST00000556017 IGLV8-61A0A075B6I0 122 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms