RNA–Protein interactions for RNA: ENST00000555964.5

XRCC3-215, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-215ENST00000555964 C3orf22Q8N5N4 141 aa9.71□□□□□ -0.86
XRCC3-215ENST00000555964 LINC00337Q8N6G1 96 aa9.71□□□□□ -0.86
XRCC3-215ENST00000555964 ZNF22P17026 224 aaPredicted RBP9.7□□□□□ -0.86
XRCC3-215ENST00000555964 SPRR4Q96PI1 79 aa9.69□□□□□ -0.86
XRCC3-215ENST00000555964 FABP9Q0Z7S8 132 aa9.67□□□□□ -0.86
XRCC3-215ENST00000555964 ZNF625Q96I27 306 aaPredicted RBP9.67□□□□□ -0.86
XRCC3-215ENST00000555964 UQCC3Q6UW78 93 aa9.66□□□□□ -0.86
XRCC3-215ENST00000555964 HBDP02042 147 aa9.65□□□□□ -0.86
XRCC3-215ENST00000555964 LINC00158P58513 81 aa9.65□□□□□ -0.86
XRCC3-215ENST00000555964 TMEM170BQ5T4T1 132 aa9.65□□□□□ -0.86
XRCC3-215ENST00000555964 PRYO14603 147 aa9.64□□□□□ -0.87
XRCC3-215ENST00000555964 CLLU1Q5K131 121 aa9.64□□□□□ -0.87
XRCC3-215ENST00000555964 NDUFA12Q9UI09 145 aa9.64□□□□□ -0.87
XRCC3-215ENST00000555964 SPINK1P00995 79 aa9.63□□□□□ -0.87
XRCC3-215ENST00000555964 LINC01547P58512 204 aaPredicted RBP9.63□□□□□ -0.87
XRCC3-215ENST00000555964 ASB16-AS1Q495Z4 193 aa9.63□□□□□ -0.87
XRCC3-215ENST00000555964 Q8NBF4 154 aa9.63□□□□□ -0.87
XRCC3-215ENST00000555964 Q8NDZ9 215 aa9.63□□□□□ -0.87
XRCC3-215ENST00000555964 SEC11CQ9BY50 192 aa9.63□□□□□ -0.87
XRCC3-215ENST00000555964 TMEM218A2RU14 115 aa9.62□□□□□ -0.87
XRCC3-215ENST00000555964 ATP6V1G1O75348 118 aa9.62□□□□□ -0.87
XRCC3-215ENST00000555964 KRTAP13-3Q3SY46 172 aa9.62□□□□□ -0.87
XRCC3-215ENST00000555964 C11orf86A6NJI1 115 aa9.61□□□□□ -0.87
XRCC3-215ENST00000555964 LINC00614P0C842 121 aa9.61□□□□□ -0.87
XRCC3-215ENST00000555964 SEC61BP60468 96 aaKnown RBP9.61□□□□□ -0.87
XRCC3-215ENST00000555964 S100A12P80511 92 aa9.61□□□□□ -0.87
XRCC3-215ENST00000555964 BAGE3Q86Y29 109 aa9.61□□□□□ -0.87
XRCC3-215ENST00000555964 FAM19A2Q8N3H0 131 aa9.61□□□□□ -0.87
XRCC3-215ENST00000555964 A0A096LNJ9 63 aa9.6□□□□□ -0.87
XRCC3-215ENST00000555964 ETDCA0A1B0GVM5 59 aa9.59□□□□□ -0.87
XRCC3-215ENST00000555964 DAND5Q8N907 189 aa9.58□□□□□ -0.88
XRCC3-215ENST00000555964 LINC00587B1AMM8 73 aa9.57□□□□□ -0.88
XRCC3-215ENST00000555964 SPRR1AP35321 89 aa9.57□□□□□ -0.88
XRCC3-215ENST00000555964 BOD1L2Q8IYS8 172 aa9.57□□□□□ -0.88
XRCC3-215ENST00000555964 C18orf32Q8TCD1 76 aa9.57□□□□□ -0.88
XRCC3-215ENST00000555964 KCNQ1DNQ9H478 68 aa9.57□□□□□ -0.88
XRCC3-215ENST00000555964 A0A0U1RRA0 63 aa9.56□□□□□ -0.88
XRCC3-215ENST00000555964 RPS29P62273 56 aaKnown RBP9.56□□□□□ -0.88
XRCC3-215ENST00000555964 RHEBQ15382 184 aa9.56□□□□□ -0.88
XRCC3-215ENST00000555964 MEIG1Q5JSS6 88 aa9.56□□□□□ -0.88
XRCC3-215ENST00000555964 SMCR5Q8TEV8 140 aa9.56□□□□□ -0.88
XRCC3-215ENST00000555964 CHTOPQ9Y3Y2 248 aaKnown RBP9.56□□□□□ -0.88
XRCC3-215ENST00000555964 LINC00483Q53H64 154 aa9.55□□□□□ -0.88
XRCC3-215ENST00000555964 TRAPPC1Q9Y5R8 145 aa9.55□□□□□ -0.88
XRCC3-215ENST00000555964 NCR3O14931 201 aa9.54□□□□□ -0.88
XRCC3-215ENST00000555964 HERV-K104P63124 156 aa9.54□□□□□ -0.88
XRCC3-215ENST00000555964 PMCHL1Q16048 86 aa9.54□□□□□ -0.88
XRCC3-215ENST00000555964 URB1-AS1Q96HZ7 61 aa9.54□□□□□ -0.88
XRCC3-215ENST00000555964 TMEM223A0PJW6 202 aa9.53□□□□□ -0.88
XRCC3-215ENST00000555964 SMIM13P0DJ93 91 aa9.53□□□□□ -0.88
XRCC3-215ENST00000555964 MAP1LC3CQ9BXW4 147 aa9.53□□□□□ -0.88
XRCC3-215ENST00000555964 KRTAP4-16G5E9R7 235 aaPredicted RBP9.52□□□□□ -0.89
XRCC3-215ENST00000555964 GAGE2AQ6NT46 116 aa9.52□□□□□ -0.89
XRCC3-215ENST00000555964 SSBP3-AS1Q7Z2R9 100 aa9.52□□□□□ -0.89
XRCC3-215ENST00000555964 MIR7-3HGQ8N6C7 128 aa9.52□□□□□ -0.89
XRCC3-215ENST00000555964 RPS10P5Q9NQ39 176 aa9.52□□□□□ -0.89
XRCC3-215ENST00000555964 TRAV12-1A0A0B4J245 112 aa9.51□□□□□ -0.89
XRCC3-215ENST00000555964 SLC25A20O43772 301 aa9.51□□□□□ -0.89
XRCC3-215ENST00000555964 TRBV10-3A0A0K0K1G6 114 aa9.5□□□□□ -0.89
XRCC3-215ENST00000555964 MOBPQ13875 183 aa9.5□□□□□ -0.89
XRCC3-215ENST00000555964 IGLV9-49A0A0B4J1Y8 123 aa9.49□□□□□ -0.89
XRCC3-215ENST00000555964 Q8N377 158 aa9.49□□□□□ -0.89
XRCC3-215ENST00000555964 MYMXA0A1B0GTQ4 84 aa9.48□□□□□ -0.89
XRCC3-215ENST00000555964 IFI27L1Q96BM0 104 aa9.48□□□□□ -0.89
XRCC3-215ENST00000555964 TRBV10-2A0A0K0K1G8 114 aa9.46□□□□□ -0.9
XRCC3-215ENST00000555964 B5MCH6 92 aa9.46□□□□□ -0.9
XRCC3-215ENST00000555964 C10orf91Q5T1B1 145 aa9.46□□□□□ -0.9
XRCC3-215ENST00000555964 CHCHD1Q96BP2 118 aaKnown RBP9.46□□□□□ -0.9
XRCC3-215ENST00000555964 COMMD7Q86VX2 200 aa9.45□□□□□ -0.9
XRCC3-215ENST00000555964 DDTP30046 118 aa9.44□□□□□ -0.9
XRCC3-215ENST00000555964 XP32Q5T750 250 aa9.44□□□□□ -0.9
XRCC3-215ENST00000555964 Q6ZRX8 168 aa9.44□□□□□ -0.9
XRCC3-215ENST00000555964 JOSD1Q15040 202 aaPredicted RBP9.43□□□□□ -0.9
XRCC3-215ENST00000555964 MIEN1Q9BRT3 115 aa9.43□□□□□ -0.9
XRCC3-215ENST00000555964 KRTAP4-1Q9BYQ7 146 aa9.43□□□□□ -0.9
XRCC3-215ENST00000555964 IFITM2Q01629 132 aa9.42□□□□□ -0.9
XRCC3-215ENST00000555964 C9orf153Q5TBE3 101 aa9.42□□□□□ -0.9
XRCC3-215ENST00000555964 SPANXB1Q9NS25 103 aaPredicted RBP9.42□□□□□ -0.9
XRCC3-215ENST00000555964 LOC107984156A0A0G2JMH3 177 aa9.41□□□□□ -0.9
XRCC3-215ENST00000555964 ERC2-IT1O76042 136 aa9.41□□□□□ -0.9
XRCC3-215ENST00000555964 ARL17AQ8IVW1 177 aa9.41□□□□□ -0.9
XRCC3-215ENST00000555964 S100A7L2Q5SY68 101 aa9.4□□□□□ -0.9
XRCC3-215ENST00000555964 Q9BRP9 147 aa9.4□□□□□ -0.9
XRCC3-215ENST00000555964 CBY1Q9Y3M2 126 aa9.38□□□□□ -0.91
XRCC3-215ENST00000555964 C5orf52A6NGY3 159 aa9.37□□□□□ -0.91
XRCC3-215ENST00000555964 HSBP1O75506 76 aa9.37□□□□□ -0.91
XRCC3-215ENST00000555964 CRCT1Q9UGL9 99 aa9.37□□□□□ -0.91
XRCC3-215ENST00000555964 TRAV23DV6A0A075B6W5 121 aa9.36□□□□□ -0.91
XRCC3-215ENST00000555964 LEPROTO15243 131 aa9.36□□□□□ -0.91
XRCC3-215ENST00000555964 NDUFC2O95298 119 aa9.36□□□□□ -0.91
XRCC3-215ENST00000555964 NMUP48645 174 aa9.36□□□□□ -0.91
XRCC3-215ENST00000555964 NDUFA5Q16718 116 aa9.36□□□□□ -0.91
XRCC3-215ENST00000555964 LIMD2Q9BT23 127 aa9.36□□□□□ -0.91
XRCC3-215ENST00000555964 SNAPINO95295 136 aa9.35□□□□□ -0.91
XRCC3-215ENST00000555964 IGLV6-57P01721 117 aa9.35□□□□□ -0.91
XRCC3-215ENST00000555964 PLNP26678 52 aa9.35□□□□□ -0.91
XRCC3-215ENST00000555964 HINT1P49773 126 aaPredicted RBP9.35□□□□□ -0.91
XRCC3-215ENST00000555964 HERVK_113P61574 105 aa9.35□□□□□ -0.91
XRCC3-215ENST00000555964 H0Y8G0 127 aa9.34□□□□□ -0.91
XRCC3-215ENST00000555964 SLC25A34Q6PIV7 304 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms