RNA–Protein interactions for RNA: ENST00000555858.1

MTHFD1-212, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 386 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-212ENST00000555858 TRGV1A0A0A0MS02 117 aa1.52□□□□□ -2.17
MTHFD1-212ENST00000555858 LINC00959A0A1B0GUT2 108 aa1.52□□□□□ -2.17
MTHFD1-212ENST00000555858 IGKV2-29A2NJV5 120 aaPredicted RBP1.52□□□□□ -2.17
MTHFD1-212ENST00000555858 LOC730098B7Z3J9 87 aa1.52□□□□□ -2.17
MTHFD1-212ENST00000555858 NCR3O14931 201 aa1.52□□□□□ -2.17
MTHFD1-212ENST00000555858 RNASE3P12724 160 aaKnown RBP1.52□□□□□ -2.17
MTHFD1-212ENST00000555858 COX7BP24311 80 aa1.52□□□□□ -2.17
MTHFD1-212ENST00000555858 LINC00308Q8TCZ7 52 aa1.52□□□□□ -2.17
MTHFD1-212ENST00000555858 TTTY10Q9BZA0 68 aa1.52□□□□□ -2.17
MTHFD1-212ENST00000555858 LINC00472Q9H8W2 130 aa1.52□□□□□ -2.17
MTHFD1-212ENST00000555858 MALRD1Q5VYJ5 2156 aa1.52□□□□□ -2.17
MTHFD1-212ENST00000555858 COL4A5P29400 1685 aa1.51□□□□□ -2.17
MTHFD1-212ENST00000555858 COL4A4P53420 1690 aaPredicted RBP1.51□□□□□ -2.17
MTHFD1-212ENST00000555858 HEATR5BQ9P2D3 2071 aa1.51□□□□□ -2.17
MTHFD1-212ENST00000555858 DEFB131BA0A096LNP1 70 aa1.51□□□□□ -2.17
MTHFD1-212ENST00000555858 NBDYA0A0U1RRE5 68 aa1.51□□□□□ -2.17
MTHFD1-212ENST00000555858 RPL37AP61513 92 aaKnown RBP1.51□□□□□ -2.17
MTHFD1-212ENST00000555858 LCE3DQ9BYE3 92 aa1.51□□□□□ -2.17
MTHFD1-212ENST00000555858 COL5A1P20908 1838 aaPredicted RBP1.51□□□□□ -2.17
MTHFD1-212ENST00000555858 SPAG17Q6Q759 2223 aa1.51□□□□□ -2.17
MTHFD1-212ENST00000555858 A0A0G2JQZ4 141 aa1.5□□□□□ -2.17
MTHFD1-212ENST00000555858 A0A1B0GU69 56 aa1.5□□□□□ -2.17
MTHFD1-212ENST00000555858 KRTAP10-8P60410 259 aa1.5□□□□□ -2.17
MTHFD1-212ENST00000555858 ARFGEF3Q5TH69 2177 aa1.49□□□□□ -2.17
MTHFD1-212ENST00000555858 MED12Q93074 2177 aa1.49□□□□□ -2.17
MTHFD1-212ENST00000555858 CUL9Q8IWT3 2517 aa1.49□□□□□ -2.17
MTHFD1-212ENST00000555858 CR1P17927 2039 aa1.49□□□□□ -2.17
MTHFD1-212ENST00000555858 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.49□□□□□ -2.17
MTHFD1-212ENST00000555858 KRTAP10-10P60014 251 aa1.49□□□□□ -2.17
MTHFD1-212ENST00000555858 C5orf56Q8N8D9 126 aa1.49□□□□□ -2.17
MTHFD1-212ENST00000555858 DNAJC13O75165 2243 aa1.48□□□□□ -2.17
MTHFD1-212ENST00000555858 DIDO1Q9BTC0 2240 aaKnown RBP1.48□□□□□ -2.17
MTHFD1-212ENST00000555858 ZGRF1Q86YA3 2104 aa1.48□□□□□ -2.17
MTHFD1-212ENST00000555858 C10orf55Q5SWW7 151 aa1.48□□□□□ -2.17
MTHFD1-212ENST00000555858 Q6ZQY7 126 aa1.48□□□□□ -2.17
MTHFD1-212ENST00000555858 Q96NJ1 140 aa1.48□□□□□ -2.17
MTHFD1-212ENST00000555858 CCL26Q9Y258 94 aa1.48□□□□□ -2.17
MTHFD1-212ENST00000555858 LINC00158P58513 81 aa1.47□□□□□ -2.17
MTHFD1-212ENST00000555858 BRD3OSQ6XYD6 125 aa1.47□□□□□ -2.17
MTHFD1-212ENST00000555858 SMIM11BQ8TCY0 68 aa1.47□□□□□ -2.17
MTHFD1-212ENST00000555858 ARHGAP32A7KAX9 2087 aa1.46□□□□□ -2.18
MTHFD1-212ENST00000555858 LY6G6CO95867 125 aa1.46□□□□□ -2.18
MTHFD1-212ENST00000555858 ACYP2P14621 99 aa1.46□□□□□ -2.18
MTHFD1-212ENST00000555858 CRIP1P50238 77 aa1.46□□□□□ -2.18
MTHFD1-212ENST00000555858 Q8IZM0 81 aa1.46□□□□□ -2.18
MTHFD1-212ENST00000555858 CEP192Q8TEP8 1941 aa1.45□□□□□ -2.18
MTHFD1-212ENST00000555858 MDC1Q14676 2089 aaKnown RBP1.45□□□□□ -2.18
MTHFD1-212ENST00000555858 INE1O15225 51 aa1.45□□□□□ -2.18
MTHFD1-212ENST00000555858 ANGP03950 147 aaKnown RBP1.45□□□□□ -2.18
MTHFD1-212ENST00000555858 POLR2KP53803 58 aaKnown RBP1.45□□□□□ -2.18
MTHFD1-212ENST00000555858 PRCDQ00LT1 54 aa1.45□□□□□ -2.18
MTHFD1-212ENST00000555858 CCL19Q99731 98 aa1.45□□□□□ -2.18
MTHFD1-212ENST00000555858 COL4A2P08572 1712 aa1.44□□□□□ -2.18
MTHFD1-212ENST00000555858 M0R2N4 97 aa1.44□□□□□ -2.18
MTHFD1-212ENST00000555858 TPRXLQ17RH7 258 aa1.44□□□□□ -2.18
MTHFD1-212ENST00000555858 SPACA4Q8TDM5 124 aa1.44□□□□□ -2.18
MTHFD1-212ENST00000555858 TNCP24821 2201 aa1.44□□□□□ -2.18
MTHFD1-212ENST00000555858 ESPL1Q14674 2120 aa1.43□□□□□ -2.18
MTHFD1-212ENST00000555858 FREM1Q5H8C1 2179 aa1.43□□□□□ -2.18
MTHFD1-212ENST00000555858 SPTY2D1-AS1A0A0U1RR47 76 aa1.43□□□□□ -2.18
MTHFD1-212ENST00000555858 LYNX1G3V0Z9 82 aa1.43□□□□□ -2.18
MTHFD1-212ENST00000555858 H3BSH0 61 aa1.43□□□□□ -2.18
MTHFD1-212ENST00000555858 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.43□□□□□ -2.18
MTHFD1-212ENST00000555858 LINC00575Q6W349 94 aa1.43□□□□□ -2.18
MTHFD1-212ENST00000555858 TP53AIP1Q9HCN2 124 aa1.43□□□□□ -2.18
MTHFD1-212ENST00000555858 ABCA4P78363 2273 aa1.42□□□□□ -2.18
MTHFD1-212ENST00000555858 GOLGA4Q13439 2230 aaKnown RBP1.42□□□□□ -2.18
MTHFD1-212ENST00000555858 PIGYQ3MUY2 71 aa1.42□□□□□ -2.18
MTHFD1-212ENST00000555858 SDK1Q7Z5N4 2213 aa1.42□□□□□ -2.18
MTHFD1-212ENST00000555858 DOCK10Q96BY6 2186 aa1.41□□□□□ -2.18
MTHFD1-212ENST00000555858 H3BRN7 92 aa1.41□□□□□ -2.18
MTHFD1-212ENST00000555858 RPS27P42677 84 aaKnown RBP1.41□□□□□ -2.18
MTHFD1-212ENST00000555858 LCE3AQ5TA76 89 aa1.41□□□□□ -2.18
MTHFD1-212ENST00000555858 C10orf99Q6UWK7 81 aa1.41□□□□□ -2.18
MTHFD1-212ENST00000555858 DEFB106AQ8N104 65 aa1.41□□□□□ -2.18
MTHFD1-212ENST00000555858 CDKN2A-AS1Q9UH64 79 aa1.41□□□□□ -2.18
MTHFD1-212ENST00000555858 A0A096LNT2 108 aa1.4□□□□□ -2.19
MTHFD1-212ENST00000555858 G3V318 75 aa1.4□□□□□ -2.19
MTHFD1-212ENST00000555858 RPL39P62891 51 aaKnown RBP1.4□□□□□ -2.19
MTHFD1-212ENST00000555858 PP632Q6XCG6 107 aa1.4□□□□□ -2.19
MTHFD1-212ENST00000555858 COX6B2Q6YFQ2 88 aa1.4□□□□□ -2.19
MTHFD1-212ENST00000555858 SSBP3-AS1Q7Z2R9 100 aa1.4□□□□□ -2.19
MTHFD1-212ENST00000555858 IGLV5-48A0A075B6I7 105 aa1.39□□□□□ -2.19
MTHFD1-212ENST00000555858 CCL22O00626 93 aa1.39□□□□□ -2.19
MTHFD1-212ENST00000555858 SPINK9Q5DT21 86 aa1.39□□□□□ -2.19
MTHFD1-212ENST00000555858 Q6ZRX8 168 aa1.39□□□□□ -2.19
MTHFD1-212ENST00000555858 RPL39LQ96EH5 51 aaKnown RBP1.39□□□□□ -2.19
MTHFD1-212ENST00000555858 CACNA1GO43497 2377 aa1.39□□□□□ -2.19
MTHFD1-212ENST00000555858 GVQW2A0A096LPI5 108 aaPredicted RBP1.38□□□□□ -2.19
MTHFD1-212ENST00000555858 K7EQZ3 153 aa1.38□□□□□ -2.19
MTHFD1-212ENST00000555858 PRB1P04280 392 aa1.38□□□□□ -2.19
MTHFD1-212ENST00000555858 PLAC4Q8WY50 150 aa1.38□□□□□ -2.19
MTHFD1-212ENST00000555858 BRWD1Q9NSI6 2320 aa1.37□□□□□ -2.19
MTHFD1-212ENST00000555858 PRO3102Q9H379 93 aa1.37□□□□□ -2.19
MTHFD1-212ENST00000555858 C6orf48Q9UBA6 75 aa1.37□□□□□ -2.19
MTHFD1-212ENST00000555858 UNC13CQ8NB66 2214 aa1.37□□□□□ -2.19
MTHFD1-212ENST00000555858 ICE1Q9Y2F5 2266 aa1.37□□□□□ -2.19
MTHFD1-212ENST00000555858 ZFHX2Q9C0A1 2572 aaPredicted RBP1.37□□□□□ -2.19
MTHFD1-212ENST00000555858 MED13LQ71F56 2210 aa1.36□□□□□ -2.19
MTHFD1-212ENST00000555858 I3L2K1 104 aa1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms