RNA–Protein interactions for RNA: ENST00000555801.1

LINC00640-202, long intergenic non-protein coding RNA 640, humanhuman

TSL 3

Gene LINC00640, Length 392 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-202ENST00000555801 DPH3Q96FX2 82 aa2.79□□□□□ -1.96
LINC00640-202ENST00000555801 CNFNQ9BYD5 112 aa2.79□□□□□ -1.96
LINC00640-202ENST00000555801 MACF1Q9UPN3 7388 aaKnown RBP2.79□□□□□ -1.96
LINC00640-202ENST00000555801 TRBV6-4A0A1B0GX49 114 aa2.78□□□□□ -1.96
LINC00640-202ENST00000555801 CRPP02741 224 aa2.78□□□□□ -1.96
LINC00640-202ENST00000555801 IFI27P40305 119 aaPredicted RBP2.78□□□□□ -1.96
LINC00640-202ENST00000555801 CEND1Q8N111 149 aa2.78□□□□□ -1.96
LINC00640-202ENST00000555801 NRACQ8N912 160 aa2.78□□□□□ -1.96
LINC00640-202ENST00000555801 PRSS3P2Q8NHM4 247 aa2.78□□□□□ -1.96
LINC00640-202ENST00000555801 C7orf33Q8WU49 177 aa2.78□□□□□ -1.96
LINC00640-202ENST00000555801 IFI27L1Q96BM0 104 aa2.78□□□□□ -1.96
LINC00640-202ENST00000555801 C20orf78Q9BR46 151 aa2.78□□□□□ -1.96
LINC00640-202ENST00000555801 CHCHD7Q9BUK0 85 aa2.78□□□□□ -1.96
LINC00640-202ENST00000555801 TRBV7-3A0A075B6L6 115 aa2.77□□□□□ -1.97
LINC00640-202ENST00000555801 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.77□□□□□ -1.97
LINC00640-202ENST00000555801 IGKV3OR2-268A0A0C4DH90 116 aa2.77□□□□□ -1.97
LINC00640-202ENST00000555801 IGKV2-29A2NJV5 120 aaPredicted RBP2.77□□□□□ -1.97
LINC00640-202ENST00000555801 SDHAF1A6NFY7 115 aa2.77□□□□□ -1.97
LINC00640-202ENST00000555801 CCDC179H3BU77 68 aa2.77□□□□□ -1.97
LINC00640-202ENST00000555801 DPM2O94777 84 aa2.77□□□□□ -1.97
LINC00640-202ENST00000555801 SLPIP03973 132 aa2.77□□□□□ -1.97
LINC00640-202ENST00000555801 NMUP48645 174 aa2.77□□□□□ -1.97
LINC00640-202ENST00000555801 UBE2D3P61077 147 aa2.77□□□□□ -1.97
LINC00640-202ENST00000555801 UBE2D2P62837 147 aa2.77□□□□□ -1.97
LINC00640-202ENST00000555801 RPL36AP83881 106 aaKnown RBP2.77□□□□□ -1.97
LINC00640-202ENST00000555801 RNASE13Q5GAN3 156 aaKnown RBP2.77□□□□□ -1.97
LINC00640-202ENST00000555801 ZC2HC1BQ5TFG8 222 aa2.77□□□□□ -1.97
LINC00640-202ENST00000555801 DGAT2L7PQ6IED9 249 aa2.77□□□□□ -1.97
LINC00640-202ENST00000555801 REG3GQ6UW15 175 aa2.77□□□□□ -1.97
LINC00640-202ENST00000555801 CLPSL2Q6UWE3 100 aa2.77□□□□□ -1.97
LINC00640-202ENST00000555801 ZFP2Q6ZN57 461 aa2.77□□□□□ -1.97
LINC00640-202ENST00000555801 NTM-AS1Q6ZSK4 140 aa2.77□□□□□ -1.97
LINC00640-202ENST00000555801 DAZ4Q86SG3 579 aaKnown RBP2.77□□□□□ -1.97
LINC00640-202ENST00000555801 RPL36ALQ969Q0 106 aaKnown RBP2.77□□□□□ -1.97
LINC00640-202ENST00000555801 UBE2WQ96B02 151 aa2.77□□□□□ -1.97
LINC00640-202ENST00000555801 OPRPNQ99935 248 aaPredicted RBP2.77□□□□□ -1.97
LINC00640-202ENST00000555801 NXT2Q9NPJ8 142 aaKnown RBP2.77□□□□□ -1.97
LINC00640-202ENST00000555801 DAZ3Q9NR90 486 aaKnown RBP2.77□□□□□ -1.97
LINC00640-202ENST00000555801 NEBP20929 6669 aa2.77□□□□□ -1.97
LINC00640-202ENST00000555801 TINCRA0A1B0GVN0 87 aa2.76□□□□□ -1.97
LINC00640-202ENST00000555801 H7C1H1 209 aa2.76□□□□□ -1.97
LINC00640-202ENST00000555801 ATP5LO75964 103 aa2.76□□□□□ -1.97
LINC00640-202ENST00000555801 NDUFC2O95298 119 aa2.76□□□□□ -1.97
LINC00640-202ENST00000555801 TSHBP01222 138 aa2.76□□□□□ -1.97
LINC00640-202ENST00000555801 LINC00694P0DN24 101 aa2.76□□□□□ -1.97
LINC00640-202ENST00000555801 COX7CP15954 63 aa2.76□□□□□ -1.97
LINC00640-202ENST00000555801 FCER1GP30273 86 aa2.76□□□□□ -1.97
LINC00640-202ENST00000555801 FXYD2P54710 66 aa2.76□□□□□ -1.97
LINC00640-202ENST00000555801 SUMO2P61956 95 aaKnown RBP2.76□□□□□ -1.97
LINC00640-202ENST00000555801 RPL39P62891 51 aaKnown RBP2.76□□□□□ -1.97
LINC00640-202ENST00000555801 MRPS36P82909 103 aaKnown RBP2.76□□□□□ -1.97
LINC00640-202ENST00000555801 TMEM170BQ5T4T1 132 aa2.76□□□□□ -1.97
LINC00640-202ENST00000555801 C9orf153Q5TBE3 101 aa2.76□□□□□ -1.97
LINC00640-202ENST00000555801 CHCHD5Q9BSY4 110 aa2.76□□□□□ -1.97
LINC00640-202ENST00000555801 KLK12Q9UKR0 248 aa2.76□□□□□ -1.97
LINC00640-202ENST00000555801 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.75□□□□□ -1.97
LINC00640-202ENST00000555801 A0A0J9YXV3 536 aa2.75□□□□□ -1.97
LINC00640-202ENST00000555801 MYMXA0A1B0GTQ4 84 aa2.75□□□□□ -1.97
LINC00640-202ENST00000555801 LINC01549A6NIU2 74 aa2.75□□□□□ -1.97
LINC00640-202ENST00000555801 I3L3M4 83 aa2.75□□□□□ -1.97
LINC00640-202ENST00000555801 ATOX1O00244 68 aa2.75□□□□□ -1.97
LINC00640-202ENST00000555801 VCYO14598 125 aa2.75□□□□□ -1.97
LINC00640-202ENST00000555801 PLNP26678 52 aa2.75□□□□□ -1.97
LINC00640-202ENST00000555801 HERVK_113P63121 156 aa2.75□□□□□ -1.97
LINC00640-202ENST00000555801 PIK3CD-AS1Q5SR53 167 aa2.75□□□□□ -1.97
LINC00640-202ENST00000555801 GAGE2AQ6NT46 116 aa2.75□□□□□ -1.97
LINC00640-202ENST00000555801 PCP2Q8IVA1 136 aa2.75□□□□□ -1.97
LINC00640-202ENST00000555801 ANKRD29Q8N6D5 301 aa2.75□□□□□ -1.97
LINC00640-202ENST00000555801 Q8N8P6 123 aa2.75□□□□□ -1.97
LINC00640-202ENST00000555801 C9orf163Q8N9P6 203 aa2.75□□□□□ -1.97
LINC00640-202ENST00000555801 NAA38Q9BRA0 125 aaKnown RBP2.75□□□□□ -1.97
LINC00640-202ENST00000555801 SMIM2Q9BVW6 85 aa2.75□□□□□ -1.97
LINC00640-202ENST00000555801 IGLV4-60A0A075B6I1 120 aa2.74□□□□□ -1.97
LINC00640-202ENST00000555801 IGHV3-64A0A075B6Q5 118 aa2.74□□□□□ -1.97
LINC00640-202ENST00000555801 IGKV2D-26A0A0A0MRZ7 120 aa2.74□□□□□ -1.97
LINC00640-202ENST00000555801 TRBV10-1A0A0K0K1A3 114 aa2.74□□□□□ -1.97
LINC00640-202ENST00000555801 USP17L23D6RBM5 183 aa2.74□□□□□ -1.97
LINC00640-202ENST00000555801 PANO1I0J062 215 aa2.74□□□□□ -1.97
LINC00640-202ENST00000555801 K7ERJ3 54 aa2.74□□□□□ -1.97
LINC00640-202ENST00000555801 UBE2L6O14933 153 aa2.74□□□□□ -1.97
LINC00640-202ENST00000555801 BCE1O60756 84 aa2.74□□□□□ -1.97
LINC00640-202ENST00000555801 IGKCP01834 107 aa2.74□□□□□ -1.97
LINC00640-202ENST00000555801 TRACP01848 142 aa2.74□□□□□ -1.97
LINC00640-202ENST00000555801 POLR2KP53803 58 aaKnown RBP2.74□□□□□ -1.97
LINC00640-202ENST00000555801 NHP2Q9NX24 153 aaKnown RBP2.74□□□□□ -1.97
LINC00640-202ENST00000555801 IGLV10-54A0A075B6I4 117 aa2.73□□□□□ -1.97
LINC00640-202ENST00000555801 TRBV25-1A0A075B6N4 114 aa2.73□□□□□ -1.97
LINC00640-202ENST00000555801 TRBV6-8A0A0A6YYG3 113 aa2.73□□□□□ -1.97
LINC00640-202ENST00000555801 TRAV12-1A0A0B4J245 112 aa2.73□□□□□ -1.97
LINC00640-202ENST00000555801 TRBV6-5A0A0K0K1A5 114 aa2.73□□□□□ -1.97
LINC00640-202ENST00000555801 TRBV27A0A0K0K1C4 114 aa2.73□□□□□ -1.97
LINC00640-202ENST00000555801 KRTAP23-1A1A580 65 aa2.73□□□□□ -1.97
LINC00640-202ENST00000555801 F8VRH5 84 aa2.73□□□□□ -1.97
LINC00640-202ENST00000555801 H3BT86 120 aa2.73□□□□□ -1.97
LINC00640-202ENST00000555801 K7EMI3 77 aa2.73□□□□□ -1.97
LINC00640-202ENST00000555801 ANGP03950 147 aaKnown RBP2.73□□□□□ -1.97
LINC00640-202ENST00000555801 UBE2D1P51668 147 aa2.73□□□□□ -1.97
LINC00640-202ENST00000555801 KRTAP10-7P60409 375 aaPredicted RBP2.73□□□□□ -1.97
LINC00640-202ENST00000555801 SRSF9Q13242 221 aaKnown RBP eCLIP2.73□□□□□ -1.97
LINC00640-202ENST00000555801 MIAQ16674 131 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 139.5 ms