RNA–Protein interactions for RNA: ENST00000555628.5

PRKCH-218, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-218ENST00000555628 FAM19A1Q7Z5A9 133 aa4.94□□□□□ -1.62
PRKCH-218ENST00000555628 GNB1LQ9BYB4 327 aa4.94□□□□□ -1.62
PRKCH-218ENST00000555628 NAT8BQ9UHF3 227 aa4.94□□□□□ -1.62
PRKCH-218ENST00000555628 GAGE2AQ6NT46 116 aa4.93□□□□□ -1.62
PRKCH-218ENST00000555628 NKAPP1Q8N9T2 125 aa4.93□□□□□ -1.62
PRKCH-218ENST00000555628 SMIM7Q9BQ49 75 aa4.93□□□□□ -1.62
PRKCH-218ENST00000555628 C2orf88Q9BSF0 95 aa4.93□□□□□ -1.62
PRKCH-218ENST00000555628 IGLV5-45A0A087WSX0 123 aa4.92□□□□□ -1.62
PRKCH-218ENST00000555628 A0A1B0GVG6 124 aa4.92□□□□□ -1.62
PRKCH-218ENST00000555628 A0A1B0GW15 77 aa4.92□□□□□ -1.62
PRKCH-218ENST00000555628 PPBPP02775 128 aa4.92□□□□□ -1.62
PRKCH-218ENST00000555628 PCOTHQ58A44 107 aa4.92□□□□□ -1.62
PRKCH-218ENST00000555628 CBLN2Q8IUK8 224 aa4.92□□□□□ -1.62
PRKCH-218ENST00000555628 MACF1Q9UPN3 7388 aaKnown RBP4.92□□□□□ -1.62
PRKCH-218ENST00000555628 HERVK_113P63121 156 aa4.91□□□□□ -1.62
PRKCH-218ENST00000555628 LINC00483Q53H64 154 aa4.91□□□□□ -1.62
PRKCH-218ENST00000555628 IGLV8-61A0A075B6I0 122 aa4.9□□□□□ -1.63
PRKCH-218ENST00000555628 UBE2V1Q13404 147 aa4.9□□□□□ -1.63
PRKCH-218ENST00000555628 HIGD2AQ9BW72 106 aa4.9□□□□□ -1.63
PRKCH-218ENST00000555628 VCX2Q9H322 139 aa4.9□□□□□ -1.63
PRKCH-218ENST00000555628 CYSLTR1Q9Y271 337 aa4.9□□□□□ -1.63
PRKCH-218ENST00000555628 RAB5AP20339 215 aa4.89□□□□□ -1.63
PRKCH-218ENST00000555628 CEBPGP53567 150 aa4.89□□□□□ -1.63
PRKCH-218ENST00000555628 RPL23P62829 140 aaKnown RBP4.89□□□□□ -1.63
PRKCH-218ENST00000555628 PDZD11Q5EBL8 140 aa4.89□□□□□ -1.63
PRKCH-218ENST00000555628 SLC51BQ86UW2 128 aa4.89□□□□□ -1.63
PRKCH-218ENST00000555628 ORMDL3Q8N138 153 aa4.89□□□□□ -1.63
PRKCH-218ENST00000555628 FAM19A2Q8N3H0 131 aa4.89□□□□□ -1.63
PRKCH-218ENST00000555628 COX7B2Q8TF08 81 aa4.89□□□□□ -1.63
PRKCH-218ENST00000555628 SRP19P09132 144 aaKnown RBP4.88□□□□□ -1.63
PRKCH-218ENST00000555628 RAB5BP61020 215 aa4.88□□□□□ -1.63
PRKCH-218ENST00000555628 SEC11AP67812 179 aa4.88□□□□□ -1.63
PRKCH-218ENST00000555628 MRPL54Q6P161 138 aaKnown RBP4.88□□□□□ -1.63
PRKCH-218ENST00000555628 PRELID3AQ96N28 172 aa4.88□□□□□ -1.63
PRKCH-218ENST00000555628 SND1-IT1Q9HBX3 110 aa4.88□□□□□ -1.63
PRKCH-218ENST00000555628 BATF3Q9NR55 127 aa4.88□□□□□ -1.63
PRKCH-218ENST00000555628 NDUFA12Q9UI09 145 aa4.88□□□□□ -1.63
PRKCH-218ENST00000555628 F8W036 122 aa4.87□□□□□ -1.63
PRKCH-218ENST00000555628 KRTAP4-16G5E9R7 235 aaPredicted RBP4.87□□□□□ -1.63
PRKCH-218ENST00000555628 SLC25A20O43772 301 aa4.87□□□□□ -1.63
PRKCH-218ENST00000555628 RGS21Q2M5E4 152 aa4.87□□□□□ -1.63
PRKCH-218ENST00000555628 TMEM136Q6ZRR5 245 aa4.87□□□□□ -1.63
PRKCH-218ENST00000555628 KRTAP2-2Q9BYT5 123 aa4.87□□□□□ -1.63
PRKCH-218ENST00000555628 GEMIN7Q9H840 131 aaKnown RBP4.87□□□□□ -1.63
PRKCH-218ENST00000555628 ZNF706Q9Y5V0 76 aaPredicted RBP4.87□□□□□ -1.63
PRKCH-218ENST00000555628 SYNE2Q8WXH0 6885 aaKnown RBP4.86□□□□□ -1.63
PRKCH-218ENST00000555628 M0R2T5 61 aa4.86□□□□□ -1.63
PRKCH-218ENST00000555628 SPRR1AP35321 89 aa4.86□□□□□ -1.63
PRKCH-218ENST00000555628 Q8N8P6 123 aa4.86□□□□□ -1.63
PRKCH-218ENST00000555628 TIMM17AQ99595 171 aa4.86□□□□□ -1.63
PRKCH-218ENST00000555628 LAMTOR2Q9Y2Q5 125 aa4.86□□□□□ -1.63
PRKCH-218ENST00000555628 TINCRA0A1B0GVN0 87 aa4.85□□□□□ -1.63
PRKCH-218ENST00000555628 S100A8P05109 93 aa4.85□□□□□ -1.63
PRKCH-218ENST00000555628 SMCR5Q8TEV8 140 aa4.85□□□□□ -1.63
PRKCH-218ENST00000555628 LOC389332A0A1B0GUA5 103 aa4.84□□□□□ -1.63
PRKCH-218ENST00000555628 C9JQL5 133 aa4.84□□□□□ -1.63
PRKCH-218ENST00000555628 SPINK8P0C7L1 97 aa4.84□□□□□ -1.63
PRKCH-218ENST00000555628 MOBPQ13875 183 aa4.84□□□□□ -1.63
PRKCH-218ENST00000555628 ORMDL2Q53FV1 153 aa4.84□□□□□ -1.63
PRKCH-218ENST00000555628 K7EMI3 77 aa4.83□□□□□ -1.64
PRKCH-218ENST00000555628 PFN2P35080 140 aa4.83□□□□□ -1.64
PRKCH-218ENST00000555628 ALKAL2Q6UX46 152 aa4.83□□□□□ -1.64
PRKCH-218ENST00000555628 SSBP3-AS1Q7Z2R9 100 aa4.83□□□□□ -1.64
PRKCH-218ENST00000555628 ATP5L2Q7Z4Y8 100 aa4.83□□□□□ -1.64
PRKCH-218ENST00000555628 TCTE3Q8IZS6 198 aa4.83□□□□□ -1.64
PRKCH-218ENST00000555628 TOMM6Q96B49 74 aa4.83□□□□□ -1.64
PRKCH-218ENST00000555628 MAP1LC3AQ9H492 121 aa4.83□□□□□ -1.64
PRKCH-218ENST00000555628 ATP5LO75964 103 aa4.82□□□□□ -1.64
PRKCH-218ENST00000555628 ADCYAP1P18509 176 aa4.82□□□□□ -1.64
PRKCH-218ENST00000555628 RPL24P83731 157 aaKnown RBP4.82□□□□□ -1.64
PRKCH-218ENST00000555628 ADIRFQ15847 76 aa4.82□□□□□ -1.64
PRKCH-218ENST00000555628 PAPPA-AS1Q5QFB9 102 aa4.82□□□□□ -1.64
PRKCH-218ENST00000555628 Q75L30 129 aa4.82□□□□□ -1.64
PRKCH-218ENST00000555628 URB1-AS1Q96HZ7 61 aa4.82□□□□□ -1.64
PRKCH-218ENST00000555628 ERG28Q9UKR5 140 aa4.82□□□□□ -1.64
PRKCH-218ENST00000555628 ERC2-IT1O76042 136 aa4.81□□□□□ -1.64
PRKCH-218ENST00000555628 RAB14P61106 215 aa4.81□□□□□ -1.64
PRKCH-218ENST00000555628 ATP6V1G1O75348 118 aa4.8□□□□□ -1.64
PRKCH-218ENST00000555628 COX17Q14061 63 aa4.8□□□□□ -1.64
PRKCH-218ENST00000555628 ERASQ7Z444 233 aa4.8□□□□□ -1.64
PRKCH-218ENST00000555628 KCNQ1DNQ9H478 68 aa4.8□□□□□ -1.64
PRKCH-218ENST00000555628 CST9LQ9H4G1 147 aa4.8□□□□□ -1.64
PRKCH-218ENST00000555628 NAT8Q9UHE5 227 aa4.8□□□□□ -1.64
PRKCH-218ENST00000555628 PAM16Q9Y3D7 125 aa4.8□□□□□ -1.64
PRKCH-218ENST00000555628 IGLV9-49A0A0B4J1Y8 123 aa4.79□□□□□ -1.64
PRKCH-218ENST00000555628 C9orf92A6NGG3 77 aa4.78□□□□□ -1.64
PRKCH-218ENST00000555628 AKAP14Q86UN6 197 aa4.78□□□□□ -1.64
PRKCH-218ENST00000555628 ZNF625Q96I27 306 aaPredicted RBP4.78□□□□□ -1.64
PRKCH-218ENST00000555628 Q9BRP9 147 aa4.78□□□□□ -1.64
PRKCH-218ENST00000555628 NXT2Q9NPJ8 142 aaKnown RBP4.78□□□□□ -1.64
PRKCH-218ENST00000555628 A0A0U1RRA0 63 aa4.77□□□□□ -1.65
PRKCH-218ENST00000555628 LINC01546A6NGU7 62 aa4.77□□□□□ -1.65
PRKCH-218ENST00000555628 CFC1P0CG37 223 aa4.77□□□□□ -1.65
PRKCH-218ENST00000555628 COX6B2Q6YFQ2 88 aa4.77□□□□□ -1.65
PRKCH-218ENST00000555628 IGLC3P0DOY3 106 aa4.76□□□□□ -1.65
PRKCH-218ENST00000555628 RPL37P61927 97 aaKnown RBP4.76□□□□□ -1.65
PRKCH-218ENST00000555628 SCGB3A1Q96QR1 104 aa4.76□□□□□ -1.65
PRKCH-218ENST00000555628 ZNF22P17026 224 aaPredicted RBP4.75□□□□□ -1.65
PRKCH-218ENST00000555628 TRBV10-3A0A0K0K1G6 114 aa4.74□□□□□ -1.65
PRKCH-218ENST00000555628 H3BRM9 83 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms