RNA–Protein interactions for RNA: ENST00000555585.5

HNRNPC-220, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-220ENST00000555585 NHP2Q9NX24 153 aaKnown RBP6.3□□□□□ -1.4
HNRNPC-220ENST00000555585 A0A087WTM6 91 aa6.29□□□□□ -1.4
HNRNPC-220ENST00000555585 LCE6AA0A183 80 aa6.29□□□□□ -1.4
HNRNPC-220ENST00000555585 KRTAP4-8A0A0G2JLE6 195 aa6.28□□□□□ -1.4
HNRNPC-220ENST00000555585 NDUFC2-KCTD14E9PQ53 114 aa6.28□□□□□ -1.4
HNRNPC-220ENST00000555585 RPL18AQ02543 176 aaKnown RBP6.28□□□□□ -1.4
HNRNPC-220ENST00000555585 COL5A1-AS1Q5SY13 56 aa6.28□□□□□ -1.4
HNRNPC-220ENST00000555585 Q8N814 137 aa6.28□□□□□ -1.4
HNRNPC-220ENST00000555585 SND1-IT1Q9HBX3 110 aa6.28□□□□□ -1.4
HNRNPC-220ENST00000555585 DNAH10Q8IVF4 4471 aa6.28□□□□□ -1.4
HNRNPC-220ENST00000555585 LOC107984640A0A0U1RRK4 108 aa6.27□□□□□ -1.41
HNRNPC-220ENST00000555585 CNBPP62633 177 aaKnown RBP6.27□□□□□ -1.41
HNRNPC-220ENST00000555585 GAGE2EQ4V326 116 aa6.27□□□□□ -1.41
HNRNPC-220ENST00000555585 RAB37Q96AX2 223 aa6.27□□□□□ -1.41
HNRNPC-220ENST00000555585 GAGE2DQ9UEU5 116 aa6.27□□□□□ -1.41
HNRNPC-220ENST00000555585 K7ERJ3 54 aa6.26□□□□□ -1.41
HNRNPC-220ENST00000555585 TLX1NBP0CAT3 122 aa6.26□□□□□ -1.41
HNRNPC-220ENST00000555585 CFC1BP0CG36 223 aa6.26□□□□□ -1.41
HNRNPC-220ENST00000555585 CFC1P0CG37 223 aa6.26□□□□□ -1.41
HNRNPC-220ENST00000555585 GAGE2BQ13066 116 aa6.26□□□□□ -1.41
HNRNPC-220ENST00000555585 Q6ZRP5 223 aa6.26□□□□□ -1.41
HNRNPC-220ENST00000555585 PPDPFQ9H3Y8 114 aa6.26□□□□□ -1.41
HNRNPC-220ENST00000555585 XAGE1AQ9HD64 81 aa6.26□□□□□ -1.41
HNRNPC-220ENST00000555585 KMT2AQ03164 3969 aa6.25□□□□□ -1.41
HNRNPC-220ENST00000555585 LOC107984156A0A0G2JMH3 177 aa6.25□□□□□ -1.41
HNRNPC-220ENST00000555585 RTL8CO15255 209 aa6.25□□□□□ -1.41
HNRNPC-220ENST00000555585 LBHQ53QV2 105 aaPredicted RBP6.25□□□□□ -1.41
HNRNPC-220ENST00000555585 ARL17AQ8IVW1 177 aa6.25□□□□□ -1.41
HNRNPC-220ENST00000555585 A0A0B4J2C4 111 aa6.24□□□□□ -1.41
HNRNPC-220ENST00000555585 A0A1B0GWB2 263 aa6.24□□□□□ -1.41
HNRNPC-220ENST00000555585 PRO1854Q9UHT4 67 aa6.24□□□□□ -1.41
HNRNPC-220ENST00000555585 H7C2G1 150 aa6.23□□□□□ -1.41
HNRNPC-220ENST00000555585 TAX1BP3O14907 124 aa6.23□□□□□ -1.41
HNRNPC-220ENST00000555585 NCR3O14931 201 aa6.23□□□□□ -1.41
HNRNPC-220ENST00000555585 C9orf163Q8N9P6 203 aa6.23□□□□□ -1.41
HNRNPC-220ENST00000555585 PKIGQ9Y2B9 76 aa6.23□□□□□ -1.41
HNRNPC-220ENST00000555585 NDUFC2O95298 119 aa6.22□□□□□ -1.41
HNRNPC-220ENST00000555585 FUSP35637 526 aaKnown RBP eCLIP6.22□□□□□ -1.41
HNRNPC-220ENST00000555585 RPL13AP40429 203 aaKnown RBP6.22□□□□□ -1.41
HNRNPC-220ENST00000555585 PRR3P79522 188 aaKnown RBP6.22□□□□□ -1.41
HNRNPC-220ENST00000555585 Q1RN00 199 aa6.22□□□□□ -1.41
HNRNPC-220ENST00000555585 LINC01620Q4KN68 170 aa6.22□□□□□ -1.41
HNRNPC-220ENST00000555585 C9orf129Q5T035 196 aaKnown RBP6.22□□□□□ -1.41
HNRNPC-220ENST00000555585 OR13C6PQ8NH95 151 aa6.22□□□□□ -1.41
HNRNPC-220ENST00000555585 IGKV2-28A0A075B6P5 120 aa6.21□□□□□ -1.42
HNRNPC-220ENST00000555585 A0A096LNI7 61 aa6.21□□□□□ -1.42
HNRNPC-220ENST00000555585 IGLV5-52A0A0A0MRZ9 124 aa6.21□□□□□ -1.42
HNRNPC-220ENST00000555585 TRAV13-2A0A0B4J235 113 aa6.21□□□□□ -1.42
HNRNPC-220ENST00000555585 IGKV2-24A0A0C4DH68 120 aa6.21□□□□□ -1.42
HNRNPC-220ENST00000555585 IGKV2D-28P01615 120 aa6.21□□□□□ -1.42
HNRNPC-220ENST00000555585 Q8NDZ9 215 aa6.21□□□□□ -1.42
HNRNPC-220ENST00000555585 NAA38Q9BRA0 125 aaKnown RBP6.21□□□□□ -1.42
HNRNPC-220ENST00000555585 DNAH2Q9P225 4427 aa6.21□□□□□ -1.42
HNRNPC-220ENST00000555585 HYDINQ4G0P3 5121 aa6.2□□□□□ -1.42
HNRNPC-220ENST00000555585 C9orf118A6NHY6 69 aa6.2□□□□□ -1.42
HNRNPC-220ENST00000555585 C16orf90A8MZG2 172 aa6.2□□□□□ -1.42
HNRNPC-220ENST00000555585 TSPAN13O95857 204 aa6.2□□□□□ -1.42
HNRNPC-220ENST00000555585 LINC00337Q8N6G1 96 aa6.2□□□□□ -1.42
HNRNPC-220ENST00000555585 FRAS1Q86XX4 4008 aa6.19□□□□□ -1.42
HNRNPC-220ENST00000555585 H3BUT2 72 aa6.19□□□□□ -1.42
HNRNPC-220ENST00000555585 VPREB1P12018 145 aa6.19□□□□□ -1.42
HNRNPC-220ENST00000555585 PSMB2P49721 201 aa6.19□□□□□ -1.42
HNRNPC-220ENST00000555585 S100A7L2Q5SY68 101 aa6.19□□□□□ -1.42
HNRNPC-220ENST00000555585 NKAPP1Q8N9T2 125 aa6.19□□□□□ -1.42
HNRNPC-220ENST00000555585 TRBV10-2A0A0K0K1G8 114 aa6.18□□□□□ -1.42
HNRNPC-220ENST00000555585 FAM168BA1KXE4 195 aa6.18□□□□□ -1.42
HNRNPC-220ENST00000555585 M0R378 163 aa6.18□□□□□ -1.42
HNRNPC-220ENST00000555585 SERTAD4-AS1Q5TG53 156 aa6.18□□□□□ -1.42
HNRNPC-220ENST00000555585 SDIM1Q6ZPB5 146 aa6.18□□□□□ -1.42
HNRNPC-220ENST00000555585 FAM19A5Q7Z5A7 132 aaPredicted RBP6.18□□□□□ -1.42
HNRNPC-220ENST00000555585 DPH3Q96FX2 82 aa6.18□□□□□ -1.42
HNRNPC-220ENST00000555585 PLA2G2DQ9UNK4 145 aa6.18□□□□□ -1.42
HNRNPC-220ENST00000555585 DNAH17Q9UFH2 4485 aa6.18□□□□□ -1.42
HNRNPC-220ENST00000555585 SACSQ9NZJ4 4579 aa6.17□□□□□ -1.42
HNRNPC-220ENST00000555585 A0A1B0GV90 55 aa6.17□□□□□ -1.42
HNRNPC-220ENST00000555585 CHTF8P0CG12 524 aa6.17□□□□□ -1.42
HNRNPC-220ENST00000555585 LINC00336Q6ZUF6 198 aa6.17□□□□□ -1.42
HNRNPC-220ENST00000555585 TMEM126AQ9H061 195 aa6.17□□□□□ -1.42
HNRNPC-220ENST00000555585 LINC00474Q9P2X8 69 aa6.17□□□□□ -1.42
HNRNPC-220ENST00000555585 SCGB1C2P0DMR2 95 aa6.16□□□□□ -1.42
HNRNPC-220ENST00000555585 KRTAP10-2P60368 255 aa6.16□□□□□ -1.42
HNRNPC-220ENST00000555585 IGLV5-37A0A075B6J1 123 aa6.15□□□□□ -1.42
HNRNPC-220ENST00000555585 A0A1W2PPM0 123 aa6.15□□□□□ -1.42
HNRNPC-220ENST00000555585 GAGE10A6NGK3 116 aa6.15□□□□□ -1.42
HNRNPC-220ENST00000555585 FABP2P12104 132 aa6.15□□□□□ -1.42
HNRNPC-220ENST00000555585 VAMP3Q15836 100 aa6.15□□□□□ -1.42
HNRNPC-220ENST00000555585 SMIM11BQ8TCY0 68 aa6.15□□□□□ -1.42
HNRNPC-220ENST00000555585 C22orf24Q9Y442 160 aa6.15□□□□□ -1.42
HNRNPC-220ENST00000555585 TRBV10-3A0A0K0K1G6 114 aa6.14□□□□□ -1.43
HNRNPC-220ENST00000555585 A0A1W2PNN7 141 aa6.14□□□□□ -1.43
HNRNPC-220ENST00000555585 COX6CP09669 75 aa6.14□□□□□ -1.43
HNRNPC-220ENST00000555585 LYRM7Q5U5X0 104 aa6.14□□□□□ -1.43
HNRNPC-220ENST00000555585 C7orf33Q8WU49 177 aa6.14□□□□□ -1.43
HNRNPC-220ENST00000555585 HECTD4Q9Y4D8 3996 aa6.14□□□□□ -1.43
HNRNPC-220ENST00000555585 PANO1I0J062 215 aa6.13□□□□□ -1.43
HNRNPC-220ENST00000555585 M0QXV9 152 aa6.13□□□□□ -1.43
HNRNPC-220ENST00000555585 TRIAP1O43715 76 aa6.13□□□□□ -1.43
HNRNPC-220ENST00000555585 IGLV6-57P01721 117 aa6.13□□□□□ -1.43
HNRNPC-220ENST00000555585 RPL28P46779 137 aaKnown RBP6.13□□□□□ -1.43
HNRNPC-220ENST00000555585 MRPL55Q7Z7F7 128 aaKnown RBP6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms