RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 NCOA3Q9Y6Q9 1424 aa-1.56□□□□□ -2.66
SNX6-204ENST00000555541 PDE4DIPQ5VU43 2346 aa-1.56□□□□□ -2.66
SNX6-204ENST00000555541 UTP20O75691 2785 aaKnown RBP-1.56□□□□□ -2.66
SNX6-204ENST00000555541 OOSP1A8MZH6 123 aa-1.56□□□□□ -2.66
SNX6-204ENST00000555541 GNG7O60262 68 aa-1.56□□□□□ -2.66
SNX6-204ENST00000555541 DEFB107AQ8IZN7 70 aa-1.56□□□□□ -2.66
SNX6-204ENST00000555541 VAMP8Q9BV40 100 aa-1.56□□□□□ -2.66
SNX6-204ENST00000555541 TEX15Q9BXT5 2789 aa-1.57□□□□□ -2.66
SNX6-204ENST00000555541 TRBV7-7A0A0K0K1E9 115 aa-1.57□□□□□ -2.66
SNX6-204ENST00000555541 C7orf77A4D0Y5 90 aa-1.57□□□□□ -2.66
SNX6-204ENST00000555541 H0Y9P7 68 aa-1.57□□□□□ -2.66
SNX6-204ENST00000555541 ARMS2P0C7Q2 107 aa-1.57□□□□□ -2.66
SNX6-204ENST00000555541 SELENOWP63302 87 aa-1.57□□□□□ -2.66
SNX6-204ENST00000555541 HSD52Q0P140 79 aa-1.57□□□□□ -2.66
SNX6-204ENST00000555541 ZNF436-AS1Q8NC38 126 aaPredicted RBP-1.57□□□□□ -2.66
SNX6-204ENST00000555541 LINC00470Q9BZP3 86 aa-1.57□□□□□ -2.66
SNX6-204ENST00000555541 PSENENQ9NZ42 101 aa-1.57□□□□□ -2.66
SNX6-204ENST00000555541 NAIPQ13075 1403 aa-1.57□□□□□ -2.66
SNX6-204ENST00000555541 QRICH2Q9H0J4 1663 aa-1.58□□□□□ -2.66
SNX6-204ENST00000555541 FAM24AA6NFZ4 105 aa-1.58□□□□□ -2.66
SNX6-204ENST00000555541 ATP5EP56381 51 aaPredicted RBP-1.58□□□□□ -2.66
SNX6-204ENST00000555541 MT1HP80294 61 aa-1.58□□□□□ -2.66
SNX6-204ENST00000555541 PAIP2BQ9ULR5 123 aaKnown RBP-1.58□□□□□ -2.66
SNX6-204ENST00000555541 KTN1Q86UP2 1357 aaKnown RBP-1.59□□□□□ -2.66
SNX6-204ENST00000555541 GCN1Q92616 2671 aaKnown RBP-1.59□□□□□ -2.66
SNX6-204ENST00000555541 NBEAL2Q6ZNJ1 2754 aa-1.59□□□□□ -2.66
SNX6-204ENST00000555541 NAP1L6A6NFF2 107 aa-1.59□□□□□ -2.66
SNX6-204ENST00000555541 PP6455Q8WZ26 134 aa-1.59□□□□□ -2.66
SNX6-204ENST00000555541 DPH3P1Q9H4G8 78 aa-1.59□□□□□ -2.66
SNX6-204ENST00000555541 SCN7AQ01118 1682 aa-1.59□□□□□ -2.66
SNX6-204ENST00000555541 PKD1L2Q7Z442 2459 aa-1.59□□□□□ -2.66
SNX6-204ENST00000555541 RELNP78509 3460 aa-1.59□□□□□ -2.66
SNX6-204ENST00000555541 SCAPERQ9BY12 1400 aa-1.59□□□□□ -2.66
SNX6-204ENST00000555541 COL14A1Q05707 1796 aaKnown RBP-1.59□□□□□ -2.66
SNX6-204ENST00000555541 COL6A5A8TX70 2615 aa-1.6□□□□□ -2.67
SNX6-204ENST00000555541 A2ML1A8K2U0 1454 aa-1.6□□□□□ -2.67
SNX6-204ENST00000555541 FGF7P21781 194 aa-1.6□□□□□ -2.67
SNX6-204ENST00000555541 CEP152O94986 1710 aa-1.6□□□□□ -2.67
SNX6-204ENST00000555541 SHROOM2Q13796 1616 aa-1.61□□□□□ -2.67
SNX6-204ENST00000555541 NBEAQ8NFP9 2946 aa-1.61□□□□□ -2.67
SNX6-204ENST00000555541 CRYM-AS1A6NIL9 109 aa-1.61□□□□□ -2.67
SNX6-204ENST00000555541 NMSQ5H8A3 153 aa-1.61□□□□□ -2.67
SNX6-204ENST00000555541 S4R3F8 94 aa-1.61□□□□□ -2.67
SNX6-204ENST00000555541 LRRK2Q5S007 2527 aa-1.61□□□□□ -2.67
SNX6-204ENST00000555541 LRRC37AA6NMS7 1700 aa-1.61□□□□□ -2.67
SNX6-204ENST00000555541 CCDC168Q8NDH2 2452 aa-1.61□□□□□ -2.67
SNX6-204ENST00000555541 DYNC1H1Q14204 4646 aaKnown RBP-1.62□□□□□ -2.67
SNX6-204ENST00000555541 TRIOO75962 3097 aa-1.62□□□□□ -2.67
SNX6-204ENST00000555541 NUP188Q5SRE5 1749 aa-1.62□□□□□ -2.67
SNX6-204ENST00000555541 DIP2CQ9Y2E4 1556 aa-1.62□□□□□ -2.67
SNX6-204ENST00000555541 TMEM262E9PQX1 116 aa-1.62□□□□□ -2.67
SNX6-204ENST00000555541 K7EP13 123 aa-1.62□□□□□ -2.67
SNX6-204ENST00000555541 K7EP34 96 aa-1.62□□□□□ -2.67
SNX6-204ENST00000555541 AKAIN1P0CW23 69 aa-1.62□□□□□ -2.67
SNX6-204ENST00000555541 MBD5Q9P267 1494 aa-1.63□□□□□ -2.67
SNX6-204ENST00000555541 MRC2Q9UBG0 1479 aa-1.63□□□□□ -2.67
SNX6-204ENST00000555541 ROBO1Q9Y6N7 1651 aa-1.63□□□□□ -2.67
SNX6-204ENST00000555541 DNAH8Q96JB1 4490 aa-1.63□□□□□ -2.67
SNX6-204ENST00000555541 TOP2BQ02880 1626 aa-1.63□□□□□ -2.67
SNX6-204ENST00000555541 RIF1Q5UIP0 2472 aaKnown RBP-1.64□□□□□ -2.67
SNX6-204ENST00000555541 ASIPP42127 132 aa-1.64□□□□□ -2.67
SNX6-204ENST00000555541 DEFB1P60022 68 aa-1.64□□□□□ -2.67
SNX6-204ENST00000555541 DEFB110Q30KQ9 67 aa-1.64□□□□□ -2.67
SNX6-204ENST00000555541 C1orf54Q8WWF1 131 aa-1.64□□□□□ -2.67
SNX6-204ENST00000555541 MYH7P12883 1935 aa-1.64□□□□□ -2.67
SNX6-204ENST00000555541 PHLPP1O60346 1717 aa-1.65□□□□□ -2.67
SNX6-204ENST00000555541 H0YAA0 97 aa-1.65□□□□□ -2.67
SNX6-204ENST00000555541 SNAPC5O75971 98 aa-1.65□□□□□ -2.67
SNX6-204ENST00000555541 PSMG4Q5JS54 123 aa-1.65□□□□□ -2.67
SNX6-204ENST00000555541 CGREF1Q99674 301 aa-1.65□□□□□ -2.67
SNX6-204ENST00000555541 AP4S1Q9Y587 144 aa-1.65□□□□□ -2.67
SNX6-204ENST00000555541 A0A0C4DFX4 3053 aa-1.65□□□□□ -2.67
SNX6-204ENST00000555541 TCHHQ07283 1943 aa-1.66□□□□□ -2.67
SNX6-204ENST00000555541 PDCD11Q14690 1871 aaKnown RBP-1.66□□□□□ -2.68
SNX6-204ENST00000555541 H7BZZ5 65 aa-1.66□□□□□ -2.68
SNX6-204ENST00000555541 NDUFA3O95167 84 aa-1.66□□□□□ -2.68
SNX6-204ENST00000555541 KRTDAPP60985 99 aa-1.66□□□□□ -2.68
SNX6-204ENST00000555541 MAPKBP1O60336 1514 aa-1.66□□□□□ -2.68
SNX6-204ENST00000555541 CUX1P39880 1505 aa-1.66□□□□□ -2.68
SNX6-204ENST00000555541 FAM186AA6NE01 2351 aa-1.67□□□□□ -2.68
SNX6-204ENST00000555541 SVBPQ8N300 66 aa-1.67□□□□□ -2.68
SNX6-204ENST00000555541 KNDC1Q76NI1 1749 aa-1.67□□□□□ -2.68
SNX6-204ENST00000555541 ABCC5O15440 1437 aa-1.67□□□□□ -2.68
SNX6-204ENST00000555541 KIAA1551Q9HCM1 1747 aa-1.68□□□□□ -2.68
SNX6-204ENST00000555541 KRTAP20-1Q3LI63 56 aa-1.68□□□□□ -2.68
SNX6-204ENST00000555541 CCDC58Q4VC31 144 aa-1.68□□□□□ -2.68
SNX6-204ENST00000555541 COX6B2Q6YFQ2 88 aa-1.68□□□□□ -2.68
SNX6-204ENST00000555541 TARBP1Q13395 1621 aaKnown RBP-1.69□□□□□ -2.68
SNX6-204ENST00000555541 BCORQ6W2J9 1755 aa-1.69□□□□□ -2.68
SNX6-204ENST00000555541 PMCHL1Q16048 86 aa-1.69□□□□□ -2.68
SNX6-204ENST00000555541 MAP3K1Q13233 1512 aa-1.7□□□□□ -2.68
SNX6-204ENST00000555541 TMEM218A2RU14 115 aa-1.7□□□□□ -2.68
SNX6-204ENST00000555541 CACFD1Q9UGQ2 172 aa-1.7□□□□□ -2.68
SNX6-204ENST00000555541 ACACBO00763 2458 aa-1.71□□□□□ -2.68
SNX6-204ENST00000555541 CEP290O15078 2479 aa-1.71□□□□□ -2.68
SNX6-204ENST00000555541 ITPR1Q14643 2758 aa-1.71□□□□□ -2.68
SNX6-204ENST00000555541 SAMD9Q5K651 1589 aa-1.72□□□□□ -2.68
SNX6-204ENST00000555541 TRBV25-1A0A075B6N4 114 aa-1.72□□□□□ -2.68
SNX6-204ENST00000555541 LOC105371267A0A1B0GV96 52 aa-1.72□□□□□ -2.68
SNX6-204ENST00000555541 hADV29S1A0JD25 119 aa-1.72□□□□□ -2.68
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms