RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 OVOL2Q9BRP0 275 aa11.67□□□□□ -0.54
PPP4R3A-208ENST00000555462 CCKP06307 115 aa11.66□□□□□ -0.54
PPP4R3A-208ENST00000555462 HIGD2BQ4VC39 106 aa11.66□□□□□ -0.54
PPP4R3A-208ENST00000555462 CELA1Q9UNI1 258 aa11.66□□□□□ -0.54
PPP4R3A-208ENST00000555462 NSD1Q96L73 2696 aaPredicted RBP11.66□□□□□ -0.54
PPP4R3A-208ENST00000555462 PRO0255Q9UI72 69 aa11.65□□□□□ -0.54
PPP4R3A-208ENST00000555462 Q6ZQY7 126 aa11.65□□□□□ -0.54
PPP4R3A-208ENST00000555462 SNURFQ9Y675 71 aa11.65□□□□□ -0.54
PPP4R3A-208ENST00000555462 SERP2Q8N6R1 65 aa11.65□□□□□ -0.54
PPP4R3A-208ENST00000555462 CSMD3Q7Z407 3707 aa11.64□□□□□ -0.55
PPP4R3A-208ENST00000555462 OXTP01178 125 aa11.64□□□□□ -0.55
PPP4R3A-208ENST00000555462 KRTAP10-3P60369 221 aa11.64□□□□□ -0.55
PPP4R3A-208ENST00000555462 Q6JHZ5 121 aa11.64□□□□□ -0.55
PPP4R3A-208ENST00000555462 KIAA0087Q14695 138 aa11.64□□□□□ -0.55
PPP4R3A-208ENST00000555462 UPK3BQ9BT76 320 aa11.64□□□□□ -0.55
PPP4R3A-208ENST00000555462 Q8IZM0 81 aa11.63□□□□□ -0.55
PPP4R3A-208ENST00000555462 SPAG11BQ08648 103 aa11.63□□□□□ -0.55
PPP4R3A-208ENST00000555462 X6R8D5 127 aa11.63□□□□□ -0.55
PPP4R3A-208ENST00000555462 CYSRT1A8MQ03 144 aa11.62□□□□□ -0.55
PPP4R3A-208ENST00000555462 J3KT08 172 aa11.62□□□□□ -0.55
PPP4R3A-208ENST00000555462 DAD1P61803 113 aa11.62□□□□□ -0.55
PPP4R3A-208ENST00000555462 C4orf26Q17RF5 130 aa11.61□□□□□ -0.55
PPP4R3A-208ENST00000555462 Q8N9L7 120 aa11.61□□□□□ -0.55
PPP4R3A-208ENST00000555462 CRYGAP11844 174 aa11.6□□□□□ -0.55
PPP4R3A-208ENST00000555462 UBL5Q9BZL1 73 aa11.6□□□□□ -0.55
PPP4R3A-208ENST00000555462 TMEM256-PLSCR3K7ERE1 68 aa11.6□□□□□ -0.55
PPP4R3A-208ENST00000555462 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.6□□□□□ -0.55
PPP4R3A-208ENST00000555462 CD164L2Q6UWJ8 174 aa11.59□□□□□ -0.55
PPP4R3A-208ENST00000555462 OBSCN-AS1Q96MR7 158 aa11.59□□□□□ -0.55
PPP4R3A-208ENST00000555462 RBM3P98179 157 aaKnown RBP11.59□□□□□ -0.55
PPP4R3A-208ENST00000555462 IGHV4-28A0A0C4DH34 117 aa11.58□□□□□ -0.56
PPP4R3A-208ENST00000555462 TRAV10A0A0B4J240 114 aa11.58□□□□□ -0.56
PPP4R3A-208ENST00000555462 TRBV10-3A0A0K0K1G6 114 aa11.58□□□□□ -0.56
PPP4R3A-208ENST00000555462 DPH3Q96FX2 82 aa11.58□□□□□ -0.56
PPP4R3A-208ENST00000555462 HRCT1Q6UXD1 115 aa11.57□□□□□ -0.56
PPP4R3A-208ENST00000555462 LY6G6DO95868 133 aa11.57□□□□□ -0.56
PPP4R3A-208ENST00000555462 DEFB105AQ8NG35 78 aa11.55□□□□□ -0.56
PPP4R3A-208ENST00000555462 JMJD7-PLA2G4BH0Y9G9 81 aa11.54□□□□□ -0.56
PPP4R3A-208ENST00000555462 LINC00575Q6W349 94 aa11.54□□□□□ -0.56
PPP4R3A-208ENST00000555462 A0A1B0GUV1 79 aa11.53□□□□□ -0.56
PPP4R3A-208ENST00000555462 KRTAP1-1Q07627 177 aa11.53□□□□□ -0.56
PPP4R3A-208ENST00000555462 SMIM9A6NGZ8 99 aa11.52□□□□□ -0.56
PPP4R3A-208ENST00000555462 RMI2Q96E14 147 aa11.52□□□□□ -0.57
PPP4R3A-208ENST00000555462 RETNQ9HD89 108 aa11.52□□□□□ -0.57
PPP4R3A-208ENST00000555462 SRRM2Q9UQ35 2752 aaKnown RBP11.5□□□□□ -0.57
PPP4R3A-208ENST00000555462 CMC4P56277 68 aaPredicted RBP11.5□□□□□ -0.57
PPP4R3A-208ENST00000555462 LINC01547P58512 204 aaPredicted RBP11.5□□□□□ -0.57
PPP4R3A-208ENST00000555462 Q6ZVQ6 151 aa11.5□□□□□ -0.57
PPP4R3A-208ENST00000555462 Q6ZQT0 140 aa11.49□□□□□ -0.57
PPP4R3A-208ENST00000555462 C6orf48Q9UBA6 75 aa11.48□□□□□ -0.57
PPP4R3A-208ENST00000555462 C3orf84H3BNL1 204 aa11.47□□□□□ -0.57
PPP4R3A-208ENST00000555462 WFDC10BQ8IUB3 73 aa11.47□□□□□ -0.57
PPP4R3A-208ENST00000555462 MGAM2Q2M2H8 2515 aa11.45□□□□□ -0.58
PPP4R3A-208ENST00000555462 TM2D3Q9BRN9 247 aa11.45□□□□□ -0.58
PPP4R3A-208ENST00000555462 TMEM258P61165 79 aa11.45□□□□□ -0.58
PPP4R3A-208ENST00000555462 CAMK2N2Q96S95 79 aa11.45□□□□□ -0.58
PPP4R3A-208ENST00000555462 ZNF561-AS1K7EIQ3 104 aa11.44□□□□□ -0.58
PPP4R3A-208ENST00000555462 TENM2Q9NT68 2774 aa11.43□□□□□ -0.58
PPP4R3A-208ENST00000555462 INAFM1C9JVW0 142 aa11.43□□□□□ -0.58
PPP4R3A-208ENST00000555462 NDUFC2O95298 119 aa11.42□□□□□ -0.58
PPP4R3A-208ENST00000555462 ZNF73O43830 326 aaPredicted RBP11.42□□□□□ -0.58
PPP4R3A-208ENST00000555462 DIRC1Q969H9 104 aa11.42□□□□□ -0.58
PPP4R3A-208ENST00000555462 LINC00167Q96N53 147 aa11.41□□□□□ -0.58
PPP4R3A-208ENST00000555462 ANK2Q01484 3957 aa11.41□□□□□ -0.58
PPP4R3A-208ENST00000555462 MUC7Q8TAX7 377 aa11.41□□□□□ -0.58
PPP4R3A-208ENST00000555462 PRB2P02812 416 aaPredicted RBP11.41□□□□□ -0.58
PPP4R3A-208ENST00000555462 F8WEM9 126 aa11.4□□□□□ -0.58
PPP4R3A-208ENST00000555462 BPY2O14599 106 aa11.4□□□□□ -0.58
PPP4R3A-208ENST00000555462 COX17Q14061 63 aa11.4□□□□□ -0.58
PPP4R3A-208ENST00000555462 LINC00612Q8N6U2 182 aa11.39□□□□□ -0.59
PPP4R3A-208ENST00000555462 Q6ZRU5 148 aa11.39□□□□□ -0.59
PPP4R3A-208ENST00000555462 RPL37AP8A6NKH3 93 aa11.38□□□□□ -0.59
PPP4R3A-208ENST00000555462 COX7BP24311 80 aa11.38□□□□□ -0.59
PPP4R3A-208ENST00000555462 C16orf95Q9H693 158 aa11.38□□□□□ -0.59
PPP4R3A-208ENST00000555462 KMT2BQ9UMN6 2715 aaPredicted RBP11.38□□□□□ -0.59
PPP4R3A-208ENST00000555462 COL7A1Q02388 2944 aa11.37□□□□□ -0.59
PPP4R3A-208ENST00000555462 IGKV2D-24A0A075B6R9 120 aa11.37□□□□□ -0.59
PPP4R3A-208ENST00000555462 FAM236DA0A1B0GTK5 79 aa11.37□□□□□ -0.59
PPP4R3A-208ENST00000555462 LYRM9A8MSI8 78 aa11.37□□□□□ -0.59
PPP4R3A-208ENST00000555462 IGLV6-57P01721 117 aa11.37□□□□□ -0.59
PPP4R3A-208ENST00000555462 SPART-AS1P0CW21 52 aa11.37□□□□□ -0.59
PPP4R3A-208ENST00000555462 FAM236CP0DP71 79 aa11.37□□□□□ -0.59
PPP4R3A-208ENST00000555462 OXLD1Q5BKU9 147 aa11.37□□□□□ -0.59
PPP4R3A-208ENST00000555462 Q8NAQ8 132 aa11.36□□□□□ -0.59
PPP4R3A-208ENST00000555462 A0A0G2JQZ4 141 aa11.36□□□□□ -0.59
PPP4R3A-208ENST00000555462 A0A1W2PNN7 141 aa11.36□□□□□ -0.59
PPP4R3A-208ENST00000555462 IGHV4-30-4P0DP06 118 aa11.36□□□□□ -0.59
PPP4R3A-208ENST00000555462 C5orf47Q569G3 176 aa11.36□□□□□ -0.59
PPP4R3A-208ENST00000555462 LYPD5Q6UWN5 251 aa11.35□□□□□ -0.59
PPP4R3A-208ENST00000555462 LELP1Q5T871 98 aa11.34□□□□□ -0.59
PPP4R3A-208ENST00000555462 LINC00474Q9P2X8 69 aa11.34□□□□□ -0.59
PPP4R3A-208ENST00000555462 H7BZZ5 65 aa11.33□□□□□ -0.59
PPP4R3A-208ENST00000555462 Q5XG85 94 aa11.33□□□□□ -0.59
PPP4R3A-208ENST00000555462 Q6ZTC4 211 aa11.33□□□□□ -0.6
PPP4R3A-208ENST00000555462 LRCOL1A6NCL2 159 aa11.32□□□□□ -0.6
PPP4R3A-208ENST00000555462 APOC4P55056 127 aa11.31□□□□□ -0.6
PPP4R3A-208ENST00000555462 KPRPQ5T749 579 aaPredicted RBP11.31□□□□□ -0.6
PPP4R3A-208ENST00000555462 ATP5EP2Q5VTU8 51 aa11.31□□□□□ -0.6
PPP4R3A-208ENST00000555462 C9orf66Q5T8R8 295 aa11.3□□□□□ -0.6
PPP4R3A-208ENST00000555462 Q6ZRP5 223 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms