RNA–Protein interactions for RNA: ENST00000555269.5

TRAPPC6B-205, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best)

Gene TRAPPC6B, Length 1,000 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-205ENST00000555269 GAGE10A6NGK3 116 aa7.54□□□□□ -1.2
TRAPPC6B-205ENST00000555269 MRPL55Q7Z7F7 128 aaKnown RBP7.54□□□□□ -1.2
TRAPPC6B-205ENST00000555269 PLA2G2DQ9UNK4 145 aa7.54□□□□□ -1.2
TRAPPC6B-205ENST00000555269 A0A0U1RRA0 63 aa7.53□□□□□ -1.2
TRAPPC6B-205ENST00000555269 PMCHL2Q9BQD1 86 aa7.53□□□□□ -1.2
TRAPPC6B-205ENST00000555269 SND1-IT1Q9HBX3 110 aa7.53□□□□□ -1.2
TRAPPC6B-205ENST00000555269 TP73-AS1Q9UF72 201 aa7.53□□□□□ -1.2
TRAPPC6B-205ENST00000555269 HMCN2Q8NDA2 5059 aa7.53□□□□□ -1.2
TRAPPC6B-205ENST00000555269 HIST1H2BKO60814 126 aa7.52□□□□□ -1.21
TRAPPC6B-205ENST00000555269 HIST1H2BJP06899 126 aa7.52□□□□□ -1.21
TRAPPC6B-205ENST00000555269 HIST1H2BOP23527 126 aa7.52□□□□□ -1.21
TRAPPC6B-205ENST00000555269 HIST1H2BBP33778 126 aa7.52□□□□□ -1.21
TRAPPC6B-205ENST00000555269 LINC00158P58513 81 aa7.52□□□□□ -1.21
TRAPPC6B-205ENST00000555269 HIST1H2BDP58876 126 aa7.52□□□□□ -1.21
TRAPPC6B-205ENST00000555269 HIST1H2BCP62807 126 aa7.52□□□□□ -1.21
TRAPPC6B-205ENST00000555269 HIST2H2BEQ16778 126 aa7.52□□□□□ -1.21
TRAPPC6B-205ENST00000555269 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.52□□□□□ -1.21
TRAPPC6B-205ENST00000555269 HIST1H2BHQ93079 126 aa7.52□□□□□ -1.21
TRAPPC6B-205ENST00000555269 HIST1H2BNQ99877 126 aa7.52□□□□□ -1.21
TRAPPC6B-205ENST00000555269 HIST1H2BMQ99879 126 aa7.52□□□□□ -1.21
TRAPPC6B-205ENST00000555269 KRTAP9-9Q9BYP9 154 aa7.52□□□□□ -1.21
TRAPPC6B-205ENST00000555269 KRTAP9-4Q9BYQ2 154 aa7.52□□□□□ -1.21
TRAPPC6B-205ENST00000555269 HSPB8Q9UJY1 196 aa7.52□□□□□ -1.21
TRAPPC6B-205ENST00000555269 COX17Q14061 63 aa7.51□□□□□ -1.21
TRAPPC6B-205ENST00000555269 Q8NDZ9 215 aa7.51□□□□□ -1.21
TRAPPC6B-205ENST00000555269 DIRC1Q969H9 104 aa7.51□□□□□ -1.21
TRAPPC6B-205ENST00000555269 IGLV5-37A0A075B6J1 123 aa7.5□□□□□ -1.21
TRAPPC6B-205ENST00000555269 H0Y9J4 135 aa7.5□□□□□ -1.21
TRAPPC6B-205ENST00000555269 ZNF861PO60384 105 aa7.49□□□□□ -1.21
TRAPPC6B-205ENST00000555269 SMIM13P0DJ93 91 aa7.49□□□□□ -1.21
TRAPPC6B-205ENST00000555269 VPREB1P12018 145 aa7.49□□□□□ -1.21
TRAPPC6B-205ENST00000555269 NKAPP1Q8N9T2 125 aa7.49□□□□□ -1.21
TRAPPC6B-205ENST00000555269 DPM2O94777 84 aa7.48□□□□□ -1.21
TRAPPC6B-205ENST00000555269 TSPEAR-AS2P59090 65 aa7.48□□□□□ -1.21
TRAPPC6B-205ENST00000555269 SFTA2Q6UW10 78 aa7.48□□□□□ -1.21
TRAPPC6B-205ENST00000555269 PRR26Q8N8Z3 221 aa7.48□□□□□ -1.21
TRAPPC6B-205ENST00000555269 NDUFA12Q9UI09 145 aa7.48□□□□□ -1.21
TRAPPC6B-205ENST00000555269 IGKV2-28A0A075B6P5 120 aa7.47□□□□□ -1.21
TRAPPC6B-205ENST00000555269 LEPROTO15243 131 aa7.47□□□□□ -1.21
TRAPPC6B-205ENST00000555269 BCE1O60756 84 aa7.47□□□□□ -1.21
TRAPPC6B-205ENST00000555269 IGKV2D-28P01615 120 aa7.47□□□□□ -1.21
TRAPPC6B-205ENST00000555269 PLNP26678 52 aa7.47□□□□□ -1.21
TRAPPC6B-205ENST00000555269 MAP1LC3CQ9BXW4 147 aa7.47□□□□□ -1.21
TRAPPC6B-205ENST00000555269 IGKCP01834 107 aa7.46□□□□□ -1.22
TRAPPC6B-205ENST00000555269 KRTAP1-4P0C5Y4 121 aa7.46□□□□□ -1.22
TRAPPC6B-205ENST00000555269 IGLV1-50A0A075B6I6 118 aa7.45□□□□□ -1.22
TRAPPC6B-205ENST00000555269 MYMXA0A1B0GTQ4 84 aa7.45□□□□□ -1.22
TRAPPC6B-205ENST00000555269 ATP6V1G1O75348 118 aa7.45□□□□□ -1.22
TRAPPC6B-205ENST00000555269 RPL24P83731 157 aaKnown RBP7.45□□□□□ -1.22
TRAPPC6B-205ENST00000555269 MEIG1Q5JSS6 88 aa7.45□□□□□ -1.22
TRAPPC6B-205ENST00000555269 MIR7-3HGQ8N6C7 128 aa7.45□□□□□ -1.22
TRAPPC6B-205ENST00000555269 TMEM238C9JI98 176 aa7.44□□□□□ -1.22
TRAPPC6B-205ENST00000555269 SYS1-DBNDD2H3BUS1 97 aa7.44□□□□□ -1.22
TRAPPC6B-205ENST00000555269 J3QQQ9 107 aa7.44□□□□□ -1.22
TRAPPC6B-205ENST00000555269 HERV-K104P63124 156 aa7.44□□□□□ -1.22
TRAPPC6B-205ENST00000555269 PLEKHB2Q96CS7 222 aa7.44□□□□□ -1.22
TRAPPC6B-205ENST00000555269 RPL28P46779 137 aaKnown RBP7.43□□□□□ -1.22
TRAPPC6B-205ENST00000555269 HERVK_113P61574 105 aa7.42□□□□□ -1.22
TRAPPC6B-205ENST00000555269 BOD1L2Q8IYS8 172 aa7.42□□□□□ -1.22
TRAPPC6B-205ENST00000555269 DAND5Q8N907 189 aa7.42□□□□□ -1.22
TRAPPC6B-205ENST00000555269 ANAPC11Q9NYG5 84 aa7.42□□□□□ -1.22
TRAPPC6B-205ENST00000555269 M0R378 163 aa7.41□□□□□ -1.22
TRAPPC6B-205ENST00000555269 LGALS3P17931 250 aaKnown RBP7.41□□□□□ -1.22
TRAPPC6B-205ENST00000555269 UBE2AP49459 152 aa7.41□□□□□ -1.22
TRAPPC6B-205ENST00000555269 KRTAP13-1Q8IUC0 172 aa7.41□□□□□ -1.22
TRAPPC6B-205ENST00000555269 TMEM126AQ9H061 195 aa7.41□□□□□ -1.22
TRAPPC6B-205ENST00000555269 LINC00587B1AMM8 73 aa7.4□□□□□ -1.22
TRAPPC6B-205ENST00000555269 C3orf79P0CE67 100 aa7.4□□□□□ -1.22
TRAPPC6B-205ENST00000555269 PRLHP81277 87 aa7.4□□□□□ -1.22
TRAPPC6B-205ENST00000555269 COA6Q5JTJ3 125 aaKnown RBP7.4□□□□□ -1.22
TRAPPC6B-205ENST00000555269 LINC01545Q5VT33 79 aa7.4□□□□□ -1.22
TRAPPC6B-205ENST00000555269 PET117Q6UWS5 81 aa7.4□□□□□ -1.22
TRAPPC6B-205ENST00000555269 NCR3O14931 201 aa7.39□□□□□ -1.23
TRAPPC6B-205ENST00000555269 ANKRD39Q53RE8 183 aa7.39□□□□□ -1.23
TRAPPC6B-205ENST00000555269 FAM19A1Q7Z5A9 133 aa7.39□□□□□ -1.23
TRAPPC6B-205ENST00000555269 E9PLD3 99 aa7.38□□□□□ -1.23
TRAPPC6B-205ENST00000555269 NMUP48645 174 aa7.38□□□□□ -1.23
TRAPPC6B-205ENST00000555269 ADAMTSL4-AS1Q5T5F5 129 aa7.38□□□□□ -1.23
TRAPPC6B-205ENST00000555269 A0A0J9YXY3 114 aa7.37□□□□□ -1.23
TRAPPC6B-205ENST00000555269 KRTDAPP60985 99 aa7.37□□□□□ -1.23
TRAPPC6B-205ENST00000555269 UBR4Q5T4S7 5183 aa7.37□□□□□ -1.23
TRAPPC6B-205ENST00000555269 A0A087X002 238 aa7.36□□□□□ -1.23
TRAPPC6B-205ENST00000555269 LOC107984156A0A0G2JMH3 177 aa7.36□□□□□ -1.23
TRAPPC6B-205ENST00000555269 S100A1P23297 94 aa7.36□□□□□ -1.23
TRAPPC6B-205ENST00000555269 ARL17AQ8IVW1 177 aa7.36□□□□□ -1.23
TRAPPC6B-205ENST00000555269 IGKV2D-26A0A0A0MRZ7 120 aa7.35□□□□□ -1.23
TRAPPC6B-205ENST00000555269 NPC2P61916 151 aa7.35□□□□□ -1.23
TRAPPC6B-205ENST00000555269 TTTY13Q9BZ97 58 aa7.35□□□□□ -1.23
TRAPPC6B-205ENST00000555269 LRP2P98164 4655 aa7.34□□□□□ -1.23
TRAPPC6B-205ENST00000555269 KRTAP4-8A0A0G2JLE6 195 aa7.34□□□□□ -1.23
TRAPPC6B-205ENST00000555269 TRBV10-3A0A0K0K1G6 114 aa7.34□□□□□ -1.23
TRAPPC6B-205ENST00000555269 SOSTDC1Q6X4U4 206 aa7.34□□□□□ -1.23
TRAPPC6B-205ENST00000555269 RPL13AP40429 203 aaKnown RBP7.33□□□□□ -1.24
TRAPPC6B-205ENST00000555269 KCNQ1DNQ9H478 68 aa7.33□□□□□ -1.24
TRAPPC6B-205ENST00000555269 CRYGAP11844 174 aa7.32□□□□□ -1.24
TRAPPC6B-205ENST00000555269 KRTAP13-2Q52LG2 175 aa7.32□□□□□ -1.24
TRAPPC6B-205ENST00000555269 ATOH7Q8N100 152 aa7.32□□□□□ -1.24
TRAPPC6B-205ENST00000555269 HIGD2AQ9BW72 106 aa7.32□□□□□ -1.24
TRAPPC6B-205ENST00000555269 PRYO14603 147 aa7.31□□□□□ -1.24
TRAPPC6B-205ENST00000555269 LITAFQ99732 161 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms