RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 SMIM17P0DL12 118 aa1.84□□□□□ -2.11
CKS1BP1-201ENST00000555221 DEFB130BP0DP73 79 aa1.84□□□□□ -2.11
CKS1BP1-201ENST00000555221 DEFB130AP0DP74 79 aa1.84□□□□□ -2.11
CKS1BP1-201ENST00000555221 PYYP10082 97 aa1.84□□□□□ -2.11
CKS1BP1-201ENST00000555221 MGST1P10620 155 aaKnown RBP1.84□□□□□ -2.11
CKS1BP1-201ENST00000555221 ASIPP42127 132 aa1.84□□□□□ -2.11
CKS1BP1-201ENST00000555221 GNG4P50150 75 aa1.84□□□□□ -2.11
CKS1BP1-201ENST00000555221 GOLT1AQ6ZVE7 132 aa1.84□□□□□ -2.11
CKS1BP1-201ENST00000555221 EXOC3-AS1Q8N2X6 119 aa1.84□□□□□ -2.11
CKS1BP1-201ENST00000555221 FAM24BQ8N5W8 94 aa1.84□□□□□ -2.11
CKS1BP1-201ENST00000555221 C9orf163Q8N9P6 203 aa1.84□□□□□ -2.11
CKS1BP1-201ENST00000555221 TOMM6Q96B49 74 aa1.84□□□□□ -2.11
CKS1BP1-201ENST00000555221 SCGB3A1Q96QR1 104 aa1.84□□□□□ -2.11
CKS1BP1-201ENST00000555221 SLC35B3Q9H1N7 401 aa1.84□□□□□ -2.11
CKS1BP1-201ENST00000555221 NOP10Q9NPE3 64 aaKnown RBP1.84□□□□□ -2.11
CKS1BP1-201ENST00000555221 MED9Q9NWA0 146 aa1.84□□□□□ -2.11
CKS1BP1-201ENST00000555221 PRO0255Q9UI72 69 aa1.84□□□□□ -2.11
CKS1BP1-201ENST00000555221 LY96Q9Y6Y9 160 aa1.84□□□□□ -2.11
CKS1BP1-201ENST00000555221 TRGV1A0A0A0MS02 117 aa1.83□□□□□ -2.12
CKS1BP1-201ENST00000555221 TRAV4A0A0B4J268 109 aa1.83□□□□□ -2.12
CKS1BP1-201ENST00000555221 TRBV6-4A0A1B0GX49 114 aa1.83□□□□□ -2.12
CKS1BP1-201ENST00000555221 M0R3E3 92 aa1.83□□□□□ -2.12
CKS1BP1-201ENST00000555221 G0S2P27469 103 aa1.83□□□□□ -2.12
CKS1BP1-201ENST00000555221 Q5BKY6 102 aa1.83□□□□□ -2.12
CKS1BP1-201ENST00000555221 GDF5OSQ5U4N7 250 aa1.83□□□□□ -2.12
CKS1BP1-201ENST00000555221 UBE2DNLQ8IWF7 75 aa1.83□□□□□ -2.12
CKS1BP1-201ENST00000555221 BTF3L4Q96K17 158 aa1.83□□□□□ -2.12
CKS1BP1-201ENST00000555221 WFDC10AQ9H1F0 79 aa1.83□□□□□ -2.12
CKS1BP1-201ENST00000555221 GNG13Q9P2W3 67 aa1.83□□□□□ -2.12
CKS1BP1-201ENST00000555221 HECTD4Q9Y4D8 3996 aa1.82□□□□□ -2.12
CKS1BP1-201ENST00000555221 FRAS1Q86XX4 4008 aa1.82□□□□□ -2.12
CKS1BP1-201ENST00000555221 TRAV12-2A0A075B6T6 113 aa1.82□□□□□ -2.12
CKS1BP1-201ENST00000555221 TRAV9-1A0A075B6T8 112 aa1.82□□□□□ -2.12
CKS1BP1-201ENST00000555221 IGKV2-40A0A087WW87 121 aaPredicted RBP1.82□□□□□ -2.12
CKS1BP1-201ENST00000555221 TRBV10-1A0A0K0K1A3 114 aa1.82□□□□□ -2.12
CKS1BP1-201ENST00000555221 SPINK4O60575 86 aa1.82□□□□□ -2.12
CKS1BP1-201ENST00000555221 LY6G6CO95867 125 aa1.82□□□□□ -2.12
CKS1BP1-201ENST00000555221 IGKV2D-40P01614 121 aaPredicted RBP1.82□□□□□ -2.12
CKS1BP1-201ENST00000555221 S100A6P06703 90 aa1.82□□□□□ -2.12
CKS1BP1-201ENST00000555221 BCL2P10415 239 aa1.82□□□□□ -2.12
CKS1BP1-201ENST00000555221 EVI2AP22794 236 aa1.82□□□□□ -2.12
CKS1BP1-201ENST00000555221 SRIP30626 198 aa1.82□□□□□ -2.12
CKS1BP1-201ENST00000555221 RPL35P42766 123 aaKnown RBP1.82□□□□□ -2.12
CKS1BP1-201ENST00000555221 RAB4BP61018 213 aa1.82□□□□□ -2.12
CKS1BP1-201ENST00000555221 C12orf74Q32Q52 190 aa1.82□□□□□ -2.12
CKS1BP1-201ENST00000555221 SPANXN1Q5VSR9 72 aa1.82□□□□□ -2.12
CKS1BP1-201ENST00000555221 Q6ZSA8 131 aa1.82□□□□□ -2.12
CKS1BP1-201ENST00000555221 TRAV26-2A0A0B4J265 109 aa1.81□□□□□ -2.12
CKS1BP1-201ENST00000555221 LCE6AA0A183 80 aa1.81□□□□□ -2.12
CKS1BP1-201ENST00000555221 LINC01549A6NIU2 74 aa1.81□□□□□ -2.12
CKS1BP1-201ENST00000555221 ZNF727A8MUV8 499 aa1.81□□□□□ -2.12
CKS1BP1-201ENST00000555221 MT-ND4LP03901 98 aa1.81□□□□□ -2.12
CKS1BP1-201ENST00000555221 HTN3P15516 51 aa1.81□□□□□ -2.12
CKS1BP1-201ENST00000555221 RHOHQ15669 191 aa1.81□□□□□ -2.12
CKS1BP1-201ENST00000555221 ALKAL2Q6UX46 152 aa1.81□□□□□ -2.12
CKS1BP1-201ENST00000555221 C9orf62Q8N4C0 152 aa1.81□□□□□ -2.12
CKS1BP1-201ENST00000555221 SMIM7Q9BQ49 75 aa1.81□□□□□ -2.12
CKS1BP1-201ENST00000555221 TP73-AS1Q9UF72 201 aa1.81□□□□□ -2.12
CKS1BP1-201ENST00000555221 HMCN2Q8NDA2 5059 aa1.81□□□□□ -2.12
CKS1BP1-201ENST00000555221 DMBT1Q9UGM3 2413 aaPredicted RBP1.81□□□□□ -2.12
CKS1BP1-201ENST00000555221 TRBV7-3A0A075B6L6 115 aa1.8□□□□□ -2.12
CKS1BP1-201ENST00000555221 A0A087WX48 190 aa1.8□□□□□ -2.12
CKS1BP1-201ENST00000555221 A0A1B0GUT8 65 aa1.8□□□□□ -2.12
CKS1BP1-201ENST00000555221 DEFB4AO15263 64 aa1.8□□□□□ -2.12
CKS1BP1-201ENST00000555221 CCL25O15444 150 aa1.8□□□□□ -2.12
CKS1BP1-201ENST00000555221 ARMS2P0C7Q2 107 aa1.8□□□□□ -2.12
CKS1BP1-201ENST00000555221 S100PP25815 95 aa1.8□□□□□ -2.12
CKS1BP1-201ENST00000555221 CRYBA4P53673 196 aa1.8□□□□□ -2.12
CKS1BP1-201ENST00000555221 FOXA3P55318 350 aaPredicted RBP1.8□□□□□ -2.12
CKS1BP1-201ENST00000555221 Q0VG73 95 aa1.8□□□□□ -2.12
CKS1BP1-201ENST00000555221 C1orf134Q5TEV5 83 aa1.8□□□□□ -2.12
CKS1BP1-201ENST00000555221 Q86TA4 180 aa1.8□□□□□ -2.12
CKS1BP1-201ENST00000555221 ATP6V0E2Q8NHE4 81 aa1.8□□□□□ -2.12
CKS1BP1-201ENST00000555221 Q8TAT8 98 aa1.8□□□□□ -2.12
CKS1BP1-201ENST00000555221 TSKUQ8WUA8 353 aa1.8□□□□□ -2.12
CKS1BP1-201ENST00000555221 AP1S3Q96PC3 154 aa1.8□□□□□ -2.12
CKS1BP1-201ENST00000555221 OSTCQ9NRP0 149 aa1.8□□□□□ -2.12
CKS1BP1-201ENST00000555221 NAT8BQ9UHF3 227 aa1.8□□□□□ -2.12
CKS1BP1-201ENST00000555221 APLNQ9ULZ1 77 aa1.8□□□□□ -2.12
CKS1BP1-201ENST00000555221 DNAH3Q8TD57 4116 aa1.79□□□□□ -2.12
CKS1BP1-201ENST00000555221 TMEM262E9PQX1 116 aa1.79□□□□□ -2.12
CKS1BP1-201ENST00000555221 K7EMI3 77 aa1.79□□□□□ -2.12
CKS1BP1-201ENST00000555221 NCR2O95944 276 aa1.79□□□□□ -2.12
CKS1BP1-201ENST00000555221 ANGP03950 147 aaKnown RBP1.79□□□□□ -2.12
CKS1BP1-201ENST00000555221 DEFB1P60022 68 aa1.79□□□□□ -2.12
CKS1BP1-201ENST00000555221 GNG5P63218 68 aa1.79□□□□□ -2.12
CKS1BP1-201ENST00000555221 CLLU1Q5K131 121 aa1.79□□□□□ -2.12
CKS1BP1-201ENST00000555221 LELP1Q5T871 98 aa1.79□□□□□ -2.12
CKS1BP1-201ENST00000555221 CFAP126Q5VTH2 177 aa1.79□□□□□ -2.12
CKS1BP1-201ENST00000555221 ZC2HC1AQ96GY0 325 aa1.79□□□□□ -2.12
CKS1BP1-201ENST00000555221 DPH3P1Q9H4G8 78 aa1.79□□□□□ -2.12
CKS1BP1-201ENST00000555221 NIT2Q9NQR4 276 aa1.79□□□□□ -2.12
CKS1BP1-201ENST00000555221 TMEM242Q9NWH2 141 aa1.79□□□□□ -2.12
CKS1BP1-201ENST00000555221 LAMTOR2Q9Y2Q5 125 aa1.79□□□□□ -2.12
CKS1BP1-201ENST00000555221 MUC4Q99102 2169 aa1.78□□□□□ -2.12
CKS1BP1-201ENST00000555221 TRBV25-1A0A075B6N4 114 aa1.78□□□□□ -2.12
CKS1BP1-201ENST00000555221 A0A0J9YY99 117 aa1.78□□□□□ -2.12
CKS1BP1-201ENST00000555221 NBDYA0A0U1RRE5 68 aa1.78□□□□□ -2.12
CKS1BP1-201ENST00000555221 HIGD1CA8MV81 97 aa1.78□□□□□ -2.12
CKS1BP1-201ENST00000555221 H3BVH4 76 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms