RNA–Protein interactions for RNA: ENST00000554973.1

FCF1-207, Transcript of FCF1, rRNA-processing protein, humanhuman

TSL 3

Gene FCF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-207ENST00000554973 ADAMTS12P58397 1594 aa1.56□□□□□ -2.16
FCF1-207ENST00000554973 ZC3H13Q5T200 1668 aaKnown RBP1.56□□□□□ -2.16
FCF1-207ENST00000554973 TRAV21A0A0B4J279 112 aa1.56□□□□□ -2.16
FCF1-207ENST00000554973 UMAD1C9J7I0 102 aa1.56□□□□□ -2.16
FCF1-207ENST00000554973 POLR1AO95602 1720 aaPredicted RBP1.56□□□□□ -2.16
FCF1-207ENST00000554973 UBR3Q6ZT12 1888 aa1.56□□□□□ -2.16
FCF1-207ENST00000554973 F8P00451 2351 aa1.56□□□□□ -2.16
FCF1-207ENST00000554973 CLIP1P30622 1438 aa1.55□□□□□ -2.16
FCF1-207ENST00000554973 COL14A1Q05707 1796 aaKnown RBP1.54□□□□□ -2.16
FCF1-207ENST00000554973 CACNA1EQ15878 2313 aa1.54□□□□□ -2.16
FCF1-207ENST00000554973 IFI27P40305 119 aaPredicted RBP1.54□□□□□ -2.16
FCF1-207ENST00000554973 GAFA1Q96PS6 74 aa1.54□□□□□ -2.16
FCF1-207ENST00000554973 CRCT1Q9UGL9 99 aa1.54□□□□□ -2.16
FCF1-207ENST00000554973 A0A087WXM4 84 aa1.53□□□□□ -2.16
FCF1-207ENST00000554973 POLQO75417 2590 aa1.53□□□□□ -2.16
FCF1-207ENST00000554973 USF3Q68DE3 2245 aa1.53□□□□□ -2.16
FCF1-207ENST00000554973 USMG5Q96IX5 58 aa1.53□□□□□ -2.16
FCF1-207ENST00000554973 DUOX2Q9NRD8 1548 aa1.53□□□□□ -2.16
FCF1-207ENST00000554973 K7EQZ3 153 aa1.52□□□□□ -2.17
FCF1-207ENST00000554973 COX7BP24311 80 aa1.52□□□□□ -2.17
FCF1-207ENST00000554973 PTPRZ1P23471 2315 aaPredicted RBP1.52□□□□□ -2.17
FCF1-207ENST00000554973 ERICH3Q5RHP9 1530 aa1.51□□□□□ -2.17
FCF1-207ENST00000554973 CD163L1Q9NR16 1453 aa1.51□□□□□ -2.17
FCF1-207ENST00000554973 WFDC9Q8NEX5 89 aa1.51□□□□□ -2.17
FCF1-207ENST00000554973 FXYD6-FXYD2A0A087WZ82 144 aa1.5□□□□□ -2.17
FCF1-207ENST00000554973 CFAP43Q8NDM7 1665 aa1.5□□□□□ -2.17
FCF1-207ENST00000554973 TIAM2Q8IVF5 1701 aa1.49□□□□□ -2.17
FCF1-207ENST00000554973 SPTY2D1-AS1A0A0U1RR47 76 aa1.49□□□□□ -2.17
FCF1-207ENST00000554973 MEGF8Q7Z7M0 2845 aa1.48□□□□□ -2.17
FCF1-207ENST00000554973 HEPN1Q6WQI6 88 aa1.48□□□□□ -2.17
FCF1-207ENST00000554973 CRIPTQ9P021 101 aa1.48□□□□□ -2.17
FCF1-207ENST00000554973 DOT1LQ8TEK3 1739 aa1.47□□□□□ -2.17
FCF1-207ENST00000554973 SMIM31A0A1B0GVY4 71 aa1.47□□□□□ -2.17
FCF1-207ENST00000554973 IFI6P09912 130 aa1.47□□□□□ -2.17
FCF1-207ENST00000554973 Q5BKY6 102 aa1.47□□□□□ -2.17
FCF1-207ENST00000554973 ABCA12Q86UK0 2595 aa1.47□□□□□ -2.17
FCF1-207ENST00000554973 BCORQ6W2J9 1755 aa1.47□□□□□ -2.17
FCF1-207ENST00000554973 PTPRQQ9UMZ3 2332 aa1.46□□□□□ -2.18
FCF1-207ENST00000554973 PIEZO2Q9H5I5 2752 aa1.46□□□□□ -2.18
FCF1-207ENST00000554973 COX6B1P14854 86 aa1.46□□□□□ -2.18
FCF1-207ENST00000554973 Q5VSD8 79 aa1.46□□□□□ -2.18
FCF1-207ENST00000554973 BDP1A6H8Y1 2624 aa1.46□□□□□ -2.18
FCF1-207ENST00000554973 FMN2Q9NZ56 1722 aa1.46□□□□□ -2.18
FCF1-207ENST00000554973 MROH1Q8NDA8 1641 aa1.45□□□□□ -2.18
FCF1-207ENST00000554973 COX8AP10176 69 aa1.45□□□□□ -2.18
FCF1-207ENST00000554973 RPL38P63173 70 aaKnown RBP1.45□□□□□ -2.18
FCF1-207ENST00000554973 ITSN1Q15811 1721 aa1.44□□□□□ -2.18
FCF1-207ENST00000554973 KRTAP4-1Q9BYQ7 146 aa1.44□□□□□ -2.18
FCF1-207ENST00000554973 EIF2AK4Q9P2K8 1649 aaKnown RBP1.44□□□□□ -2.18
FCF1-207ENST00000554973 MROH2BQ7Z745 1585 aa1.43□□□□□ -2.18
FCF1-207ENST00000554973 ANKRD50Q9ULJ7 1429 aa1.43□□□□□ -2.18
FCF1-207ENST00000554973 I3L3M4 83 aa1.43□□□□□ -2.18
FCF1-207ENST00000554973 SPTBN1Q01082 2364 aaKnown RBP1.43□□□□□ -2.18
FCF1-207ENST00000554973 PLCH1Q4KWH8 1693 aa1.42□□□□□ -2.18
FCF1-207ENST00000554973 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.42□□□□□ -2.18
FCF1-207ENST00000554973 CICQ96RK0 1608 aaPredicted RBP1.42□□□□□ -2.18
FCF1-207ENST00000554973 LCE6AA0A183 80 aa1.42□□□□□ -2.18
FCF1-207ENST00000554973 NREPQ16612 68 aa1.42□□□□□ -2.18
FCF1-207ENST00000554973 FRAS1Q86XX4 4008 aa1.42□□□□□ -2.18
FCF1-207ENST00000554973 PREX1Q8TCU6 1659 aa1.42□□□□□ -2.18
FCF1-207ENST00000554973 TOP2AP11388 1531 aaKnown RBP1.41□□□□□ -2.18
FCF1-207ENST00000554973 PARP4Q9UKK3 1724 aaKnown RBP1.41□□□□□ -2.18
FCF1-207ENST00000554973 CPSF4LA6NMK7 179 aaKnown RBP1.41□□□□□ -2.18
FCF1-207ENST00000554973 HMGA1P17096 107 aaKnown RBP1.41□□□□□ -2.18
FCF1-207ENST00000554973 TENM1Q9UKZ4 2725 aa1.41□□□□□ -2.18
FCF1-207ENST00000554973 WIZO95785 1651 aa1.41□□□□□ -2.18
FCF1-207ENST00000554973 EFCAB5A4FU69 1503 aa1.4□□□□□ -2.18
FCF1-207ENST00000554973 TSC2P49815 1807 aa1.4□□□□□ -2.18
FCF1-207ENST00000554973 FBN3Q75N90 2809 aa1.4□□□□□ -2.19
FCF1-207ENST00000554973 ASXL1Q8IXJ9 1541 aa1.4□□□□□ -2.19
FCF1-207ENST00000554973 CNOT1A5YKK6 2376 aaKnown RBP1.4□□□□□ -2.19
FCF1-207ENST00000554973 CDC42BPGQ6DT37 1551 aa1.39□□□□□ -2.19
FCF1-207ENST00000554973 INO80Q9ULG1 1556 aaPredicted RBP1.39□□□□□ -2.19
FCF1-207ENST00000554973 KRTAP19-3Q7Z4W3 81 aa1.39□□□□□ -2.19
FCF1-207ENST00000554973 ABCA9Q8IUA7 1624 aa1.39□□□□□ -2.19
FCF1-207ENST00000554973 PIEZO1Q92508 2521 aa1.39□□□□□ -2.19
FCF1-207ENST00000554973 LMTK2Q8IWU2 1503 aa1.39□□□□□ -2.19
FCF1-207ENST00000554973 NWD1Q149M9 1564 aa1.38□□□□□ -2.19
FCF1-207ENST00000554973 TNCP24821 2201 aa1.38□□□□□ -2.19
FCF1-207ENST00000554973 MADDQ8WXG6 1647 aa1.38□□□□□ -2.19
FCF1-207ENST00000554973 ZNF292O60281 2723 aa1.38□□□□□ -2.19
FCF1-207ENST00000554973 H3BVH4 76 aa1.37□□□□□ -2.19
FCF1-207ENST00000554973 MRPL34Q9BQ48 92 aaKnown RBP1.37□□□□□ -2.19
FCF1-207ENST00000554973 TPRP12270 2363 aaKnown RBP1.37□□□□□ -2.19
FCF1-207ENST00000554973 RICTORQ6R327 1708 aa1.37□□□□□ -2.19
FCF1-207ENST00000554973 NESP48681 1621 aa1.37□□□□□ -2.19
FCF1-207ENST00000554973 THOC2Q8NI27 1593 aaKnown RBP1.36□□□□□ -2.19
FCF1-207ENST00000554973 ANK2Q01484 3957 aa1.36□□□□□ -2.19
FCF1-207ENST00000554973 GVINP1Q7Z2Y8 2422 aa1.36□□□□□ -2.19
FCF1-207ENST00000554973 FBN2P35556 2912 aa1.36□□□□□ -2.19
FCF1-207ENST00000554973 ZNF469Q96JG9 3925 aaPredicted RBP1.35□□□□□ -2.19
FCF1-207ENST00000554973 SPRR1AP35321 89 aa1.35□□□□□ -2.19
FCF1-207ENST00000554973 FANCD2Q9BXW9 1451 aa1.35□□□□□ -2.19
FCF1-207ENST00000554973 CCL22O00626 93 aa1.34□□□□□ -2.19
FCF1-207ENST00000554973 SPRR1BP22528 89 aa1.34□□□□□ -2.19
FCF1-207ENST00000554973 SPINK6Q6UWN8 80 aa1.34□□□□□ -2.19
FCF1-207ENST00000554973 NHSQ6T4R5 1651 aa1.34□□□□□ -2.19
FCF1-207ENST00000554973 ABCC8Q09428 1581 aa1.34□□□□□ -2.2
FCF1-207ENST00000554973 HILPDAQ9Y5L2 63 aa1.33□□□□□ -2.2
FCF1-207ENST00000554973 ABCA5Q8WWZ7 1642 aa1.33□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms