RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 RPL18AQ02543 176 aaKnown RBP10.61□□□□□ -0.71
ARHGEF40-203ENST00000554514 ENHOQ6UWT2 76 aa10.61□□□□□ -0.71
ARHGEF40-203ENST00000554514 PKD1L1Q8TDX9 2849 aa10.61□□□□□ -0.71
ARHGEF40-203ENST00000554514 NDUFC2O95298 119 aa10.61□□□□□ -0.71
ARHGEF40-203ENST00000554514 XAGE1AQ9HD64 81 aa10.61□□□□□ -0.71
ARHGEF40-203ENST00000554514 IMUPQ9GZP8 106 aa10.6□□□□□ -0.71
ARHGEF40-203ENST00000554514 LYPD5Q6UWN5 251 aa10.6□□□□□ -0.71
ARHGEF40-203ENST00000554514 HIGD2BQ4VC39 106 aa10.59□□□□□ -0.71
ARHGEF40-203ENST00000554514 OBSCN-AS1Q96MR7 158 aa10.59□□□□□ -0.71
ARHGEF40-203ENST00000554514 WFDC10BQ8IUB3 73 aa10.58□□□□□ -0.72
ARHGEF40-203ENST00000554514 F8WDY8 70 aa10.56□□□□□ -0.72
ARHGEF40-203ENST00000554514 A0A087WVE0 104 aa10.56□□□□□ -0.72
ARHGEF40-203ENST00000554514 PRR34Q9NV39 138 aa10.56□□□□□ -0.72
ARHGEF40-203ENST00000554514 WFDC9Q8NEX5 89 aa10.55□□□□□ -0.72
ARHGEF40-203ENST00000554514 TMEM256-PLSCR3K7ERE1 68 aa10.55□□□□□ -0.72
ARHGEF40-203ENST00000554514 KPRPQ5T749 579 aaPredicted RBP10.55□□□□□ -0.72
ARHGEF40-203ENST00000554514 Q6ZTC4 211 aa10.55□□□□□ -0.72
ARHGEF40-203ENST00000554514 C6orf48Q9UBA6 75 aa10.55□□□□□ -0.72
ARHGEF40-203ENST00000554514 F8P00451 2351 aa10.54□□□□□ -0.72
ARHGEF40-203ENST00000554514 J3KT08 172 aa10.54□□□□□ -0.72
ARHGEF40-203ENST00000554514 LINC00167Q96N53 147 aa10.54□□□□□ -0.72
ARHGEF40-203ENST00000554514 CCKP06307 115 aa10.53□□□□□ -0.72
ARHGEF40-203ENST00000554514 KRTAP10-11P60412 298 aa10.53□□□□□ -0.72
ARHGEF40-203ENST00000554514 LINC00575Q6W349 94 aa10.53□□□□□ -0.72
ARHGEF40-203ENST00000554514 A0A0J9YWU9 116 aa10.52□□□□□ -0.72
ARHGEF40-203ENST00000554514 TENM3Q9P273 2699 aa10.52□□□□□ -0.73
ARHGEF40-203ENST00000554514 ANK2Q01484 3957 aa10.52□□□□□ -0.73
ARHGEF40-203ENST00000554514 TRBV10-3A0A0K0K1G6 114 aa10.52□□□□□ -0.73
ARHGEF40-203ENST00000554514 hADV29S1A0JD25 119 aa10.52□□□□□ -0.73
ARHGEF40-203ENST00000554514 ZNF561-AS1K7EIQ3 104 aa10.52□□□□□ -0.73
ARHGEF40-203ENST00000554514 LAMTOR3Q9UHA4 124 aa10.52□□□□□ -0.73
ARHGEF40-203ENST00000554514 STAB1Q9NY15 2570 aa10.52□□□□□ -0.73
ARHGEF40-203ENST00000554514 A0A1B0GX51 115 aa10.51□□□□□ -0.73
ARHGEF40-203ENST00000554514 HIST1H4AP62805 103 aaKnown RBP10.51□□□□□ -0.73
ARHGEF40-203ENST00000554514 JMJD7-PLA2G4BH0Y9G9 81 aa10.51□□□□□ -0.73
ARHGEF40-203ENST00000554514 CAMK2N2Q96S95 79 aa10.51□□□□□ -0.73
ARHGEF40-203ENST00000554514 C9orf153Q5TBE3 101 aa10.5□□□□□ -0.73
ARHGEF40-203ENST00000554514 Q6JHZ5 121 aa10.49□□□□□ -0.73
ARHGEF40-203ENST00000554514 Q6ZQY7 126 aa10.49□□□□□ -0.73
ARHGEF40-203ENST00000554514 IGLV6-57P01721 117 aa10.48□□□□□ -0.73
ARHGEF40-203ENST00000554514 FLNBO75369 2602 aaKnown RBP10.48□□□□□ -0.73
ARHGEF40-203ENST00000554514 HRCT1Q6UXD1 115 aa10.48□□□□□ -0.73
ARHGEF40-203ENST00000554514 TRAV23DV6A0A075B6W5 121 aa10.47□□□□□ -0.73
ARHGEF40-203ENST00000554514 C3orf22Q8N5N4 141 aa10.47□□□□□ -0.73
ARHGEF40-203ENST00000554514 ESRGQ1W209 222 aa10.47□□□□□ -0.73
ARHGEF40-203ENST00000554514 SEC61GP60059 68 aa10.46□□□□□ -0.73
ARHGEF40-203ENST00000554514 C4orf26Q17RF5 130 aa10.46□□□□□ -0.73
ARHGEF40-203ENST00000554514 Q6ZRU5 148 aa10.46□□□□□ -0.73
ARHGEF40-203ENST00000554514 RBM3P98179 157 aaKnown RBP10.45□□□□□ -0.74
ARHGEF40-203ENST00000554514 NOTCH1P46531 2555 aa10.45□□□□□ -0.74
ARHGEF40-203ENST00000554514 MRAPQ8TCY5 172 aa10.45□□□□□ -0.74
ARHGEF40-203ENST00000554514 DIRC1Q969H9 104 aa10.45□□□□□ -0.74
ARHGEF40-203ENST00000554514 IGKV2D-24A0A075B6R9 120 aa10.44□□□□□ -0.74
ARHGEF40-203ENST00000554514 M0R2N4 97 aa10.44□□□□□ -0.74
ARHGEF40-203ENST00000554514 C1orf43Q9BWL3 253 aa10.44□□□□□ -0.74
ARHGEF40-203ENST00000554514 MAST4O15021 2626 aa10.44□□□□□ -0.74
ARHGEF40-203ENST00000554514 GVQW2A0A096LPI5 108 aaPredicted RBP10.44□□□□□ -0.74
ARHGEF40-203ENST00000554514 UQCRQO14949 82 aa10.44□□□□□ -0.74
ARHGEF40-203ENST00000554514 ATOX1O00244 68 aa10.43□□□□□ -0.74
ARHGEF40-203ENST00000554514 ZNF73O43830 326 aaPredicted RBP10.43□□□□□ -0.74
ARHGEF40-203ENST00000554514 C15orf56Q8N910 161 aa10.42□□□□□ -0.74
ARHGEF40-203ENST00000554514 FAM19A1Q7Z5A9 133 aa10.42□□□□□ -0.74
ARHGEF40-203ENST00000554514 MUC7Q8TAX7 377 aa10.42□□□□□ -0.74
ARHGEF40-203ENST00000554514 FBN1P35555 2871 aaKnown RBP10.42□□□□□ -0.74
ARHGEF40-203ENST00000554514 DEFB131BA0A096LNP1 70 aa10.41□□□□□ -0.74
ARHGEF40-203ENST00000554514 COX7CP15954 63 aa10.41□□□□□ -0.74
ARHGEF40-203ENST00000554514 UBL5Q9BZL1 73 aa10.41□□□□□ -0.74
ARHGEF40-203ENST00000554514 PKIGQ9Y2B9 76 aa10.41□□□□□ -0.74
ARHGEF40-203ENST00000554514 USP17L23D6RBM5 183 aa10.4□□□□□ -0.74
ARHGEF40-203ENST00000554514 KRTAP26-1Q6PEX3 210 aa10.4□□□□□ -0.74
ARHGEF40-203ENST00000554514 COX7BP24311 80 aa10.4□□□□□ -0.74
ARHGEF40-203ENST00000554514 Q6ZQT0 140 aa10.4□□□□□ -0.74
ARHGEF40-203ENST00000554514 C2orf48Q96LS8 159 aa10.4□□□□□ -0.74
ARHGEF40-203ENST00000554514 PRB2P02812 416 aaPredicted RBP10.4□□□□□ -0.75
ARHGEF40-203ENST00000554514 VPREB1P12018 145 aa10.39□□□□□ -0.75
ARHGEF40-203ENST00000554514 KRTAP24-1Q3LI83 254 aa10.39□□□□□ -0.75
ARHGEF40-203ENST00000554514 C11orf45Q8TAV5 145 aa10.39□□□□□ -0.75
ARHGEF40-203ENST00000554514 DSCR8Q96T75 97 aa10.39□□□□□ -0.75
ARHGEF40-203ENST00000554514 EGFEM1PQ0D2K5 195 aa10.37□□□□□ -0.75
ARHGEF40-203ENST00000554514 Q6ZRP5 223 aa10.37□□□□□ -0.75
ARHGEF40-203ENST00000554514 H3BNG1 76 aa10.37□□□□□ -0.75
ARHGEF40-203ENST00000554514 HAMPP81172 84 aa10.37□□□□□ -0.75
ARHGEF40-203ENST00000554514 NDUFC2-KCTD14E9PQ53 114 aa10.36□□□□□ -0.75
ARHGEF40-203ENST00000554514 CYSTM1Q9H1C7 97 aa10.36□□□□□ -0.75
ARHGEF40-203ENST00000554514 CMYA5Q8N3K9 4069 aa10.35□□□□□ -0.75
ARHGEF40-203ENST00000554514 M0R378 163 aa10.34□□□□□ -0.75
ARHGEF40-203ENST00000554514 ELOF1P60002 83 aaKnown RBP10.34□□□□□ -0.75
ARHGEF40-203ENST00000554514 UPK3BQ9BT76 320 aa10.34□□□□□ -0.75
ARHGEF40-203ENST00000554514 LOC110117498A0A087WWA1 95 aa10.33□□□□□ -0.76
ARHGEF40-203ENST00000554514 SYCNQ0VAF6 134 aa10.33□□□□□ -0.76
ARHGEF40-203ENST00000554514 SERP2Q8N6R1 65 aa10.33□□□□□ -0.76
ARHGEF40-203ENST00000554514 GHRHP01286 108 aa10.32□□□□□ -0.76
ARHGEF40-203ENST00000554514 LINC01556Q5JQF7 62 aa10.32□□□□□ -0.76
ARHGEF40-203ENST00000554514 RPS28P62857 69 aaKnown RBP10.31□□□□□ -0.76
ARHGEF40-203ENST00000554514 ATP5EP2Q5VTU8 51 aa10.31□□□□□ -0.76
ARHGEF40-203ENST00000554514 SCXQ7RTU7 201 aa10.31□□□□□ -0.76
ARHGEF40-203ENST00000554514 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.31□□□□□ -0.76
ARHGEF40-203ENST00000554514 Q6ZVQ6 151 aa10.3□□□□□ -0.76
ARHGEF40-203ENST00000554514 NKAPP1Q8N9T2 125 aa10.3□□□□□ -0.76
ARHGEF40-203ENST00000554514 DEFB105AQ8NG35 78 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms