RNA–Protein interactions for RNA: ENST00000554390.5

PPP4R3A-202, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 2,953 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-202ENST00000554390 SNURFQ9Y675 71 aa11.66□□□□□ -0.54
PPP4R3A-202ENST00000554390 SPATA3Q8NHX4 192 aa11.65□□□□□ -0.54
PPP4R3A-202ENST00000554390 LINC00959A0A1B0GUT2 108 aa11.65□□□□□ -0.54
PPP4R3A-202ENST00000554390 C16orf74Q96GX8 76 aa11.65□□□□□ -0.54
PPP4R3A-202ENST00000554390 HIVEP1P15822 2718 aa11.65□□□□□ -0.54
PPP4R3A-202ENST00000554390 TRAV10A0A0B4J240 114 aa11.64□□□□□ -0.55
PPP4R3A-202ENST00000554390 C19orf73Q9NVV2 129 aa11.64□□□□□ -0.55
PPP4R3A-202ENST00000554390 PRO0628Q9UI54 55 aa11.64□□□□□ -0.55
PPP4R3A-202ENST00000554390 LINC00482Q8N8I6 264 aa11.64□□□□□ -0.55
PPP4R3A-202ENST00000554390 RMI2Q96E14 147 aa11.64□□□□□ -0.55
PPP4R3A-202ENST00000554390 M0R2N4 97 aa11.64□□□□□ -0.55
PPP4R3A-202ENST00000554390 Q6ZQT0 140 aa11.64□□□□□ -0.55
PPP4R3A-202ENST00000554390 HAMPP81172 84 aa11.63□□□□□ -0.55
PPP4R3A-202ENST00000554390 KLKP1Q107X0 134 aa11.63□□□□□ -0.55
PPP4R3A-202ENST00000554390 CSNK1G2-AS1Q8NCQ2 148 aa11.63□□□□□ -0.55
PPP4R3A-202ENST00000554390 LINC01547P58512 204 aaPredicted RBP11.63□□□□□ -0.55
PPP4R3A-202ENST00000554390 RBM3P98179 157 aaKnown RBP11.63□□□□□ -0.55
PPP4R3A-202ENST00000554390 SMR3AQ99954 134 aa11.63□□□□□ -0.55
PPP4R3A-202ENST00000554390 C6orf99Q4VX62 202 aa11.62□□□□□ -0.55
PPP4R3A-202ENST00000554390 BCE1O60756 84 aa11.62□□□□□ -0.55
PPP4R3A-202ENST00000554390 ZNF843Q8N446 348 aa11.61□□□□□ -0.55
PPP4R3A-202ENST00000554390 F8WEM9 126 aa11.6□□□□□ -0.55
PPP4R3A-202ENST00000554390 FP248Q71RG6 208 aaPredicted RBP11.6□□□□□ -0.55
PPP4R3A-202ENST00000554390 Q8IZM0 81 aa11.6□□□□□ -0.55
PPP4R3A-202ENST00000554390 LINC00269Q8N2A0 174 aa11.6□□□□□ -0.55
PPP4R3A-202ENST00000554390 Q8NDZ9 215 aa11.59□□□□□ -0.55
PPP4R3A-202ENST00000554390 LAMTOR3Q9UHA4 124 aa11.59□□□□□ -0.55
PPP4R3A-202ENST00000554390 Q6ZVQ6 151 aa11.59□□□□□ -0.55
PPP4R3A-202ENST00000554390 C16orf95Q9H693 158 aa11.59□□□□□ -0.55
PPP4R3A-202ENST00000554390 SMIM26A0A096LP01 95 aa11.58□□□□□ -0.56
PPP4R3A-202ENST00000554390 IGLV1-51P01701 117 aa11.58□□□□□ -0.56
PPP4R3A-202ENST00000554390 LINC00575Q6W349 94 aa11.58□□□□□ -0.56
PPP4R3A-202ENST00000554390 HTN3P15516 51 aa11.57□□□□□ -0.56
PPP4R3A-202ENST00000554390 C1orf43Q9BWL3 253 aa11.57□□□□□ -0.56
PPP4R3A-202ENST00000554390 LOC110117498A0A087WWA1 95 aa11.57□□□□□ -0.56
PPP4R3A-202ENST00000554390 ZNF561-AS1K7EIQ3 104 aa11.56□□□□□ -0.56
PPP4R3A-202ENST00000554390 C6orf223Q8N319 242 aa11.56□□□□□ -0.56
PPP4R3A-202ENST00000554390 ANGP03950 147 aaKnown RBP11.54□□□□□ -0.56
PPP4R3A-202ENST00000554390 LINC00474Q9P2X8 69 aa11.54□□□□□ -0.56
PPP4R3A-202ENST00000554390 DEFB135Q30KP9 77 aa11.53□□□□□ -0.56
PPP4R3A-202ENST00000554390 TM2D3Q9BRN9 247 aa11.53□□□□□ -0.56
PPP4R3A-202ENST00000554390 C10orf25Q5T742 122 aa11.52□□□□□ -0.57
PPP4R3A-202ENST00000554390 TRBV7-6A0A0J9YX20 115 aa11.52□□□□□ -0.57
PPP4R3A-202ENST00000554390 PKIGQ9Y2B9 76 aa11.52□□□□□ -0.57
PPP4R3A-202ENST00000554390 KRTAP10-3P60369 221 aa11.51□□□□□ -0.57
PPP4R3A-202ENST00000554390 CXCL6P80162 114 aa11.51□□□□□ -0.57
PPP4R3A-202ENST00000554390 KIAA0087Q14695 138 aa11.51□□□□□ -0.57
PPP4R3A-202ENST00000554390 SCXQ7RTU7 201 aa11.51□□□□□ -0.57
PPP4R3A-202ENST00000554390 COX17Q14061 63 aa11.5□□□□□ -0.57
PPP4R3A-202ENST00000554390 CHCHD10Q8WYQ3 142 aaPredicted RBP11.49□□□□□ -0.57
PPP4R3A-202ENST00000554390 Q6ZQY7 126 aa11.49□□□□□ -0.57
PPP4R3A-202ENST00000554390 UNQ6190/PRO20217Q6UXQ8 127 aa11.48□□□□□ -0.57
PPP4R3A-202ENST00000554390 X6R8D5 127 aa11.48□□□□□ -0.57
PPP4R3A-202ENST00000554390 TRBV7-4A0A0J9YYF1 115 aa11.47□□□□□ -0.57
PPP4R3A-202ENST00000554390 KRTAP1-1Q07627 177 aa11.47□□□□□ -0.57
PPP4R3A-202ENST00000554390 NDUFC1O43677 76 aa11.47□□□□□ -0.57
PPP4R3A-202ENST00000554390 CMC4P56277 68 aaPredicted RBP11.47□□□□□ -0.57
PPP4R3A-202ENST00000554390 F8P00451 2351 aa11.47□□□□□ -0.57
PPP4R3A-202ENST00000554390 A0A1B0GUV1 79 aa11.46□□□□□ -0.57
PPP4R3A-202ENST00000554390 MIFP14174 115 aa11.46□□□□□ -0.57
PPP4R3A-202ENST00000554390 C9orf66Q5T8R8 295 aa11.46□□□□□ -0.57
PPP4R3A-202ENST00000554390 MUC7Q8TAX7 377 aa11.46□□□□□ -0.58
PPP4R3A-202ENST00000554390 XAGE1AQ9HD64 81 aa11.45□□□□□ -0.58
PPP4R3A-202ENST00000554390 CELA1Q9UNI1 258 aa11.45□□□□□ -0.58
PPP4R3A-202ENST00000554390 PDE6GP18545 87 aa11.45□□□□□ -0.58
PPP4R3A-202ENST00000554390 REG3AQ06141 175 aa11.45□□□□□ -0.58
PPP4R3A-202ENST00000554390 PRO0255Q9UI72 69 aa11.44□□□□□ -0.58
PPP4R3A-202ENST00000554390 IGHV4-28A0A0C4DH34 117 aa11.44□□□□□ -0.58
PPP4R3A-202ENST00000554390 BRK1Q8WUW1 75 aa11.43□□□□□ -0.58
PPP4R3A-202ENST00000554390 NREPQ16612 68 aa11.43□□□□□ -0.58
PPP4R3A-202ENST00000554390 CD164L2Q6UWJ8 174 aa11.43□□□□□ -0.58
PPP4R3A-202ENST00000554390 NSD1Q96L73 2696 aaPredicted RBP11.43□□□□□ -0.58
PPP4R3A-202ENST00000554390 TENM3Q9P273 2699 aa11.43□□□□□ -0.58
PPP4R3A-202ENST00000554390 ATP5EP56381 51 aaPredicted RBP11.42□□□□□ -0.58
PPP4R3A-202ENST00000554390 BAHCC1Q9P281 2608 aa11.41□□□□□ -0.58
PPP4R3A-202ENST00000554390 FBN1P35555 2871 aaKnown RBP11.41□□□□□ -0.58
PPP4R3A-202ENST00000554390 TMEM254Q8TBM7 123 aa11.41□□□□□ -0.58
PPP4R3A-202ENST00000554390 KLK12Q9UKR0 248 aa11.41□□□□□ -0.58
PPP4R3A-202ENST00000554390 FAM229BQ4G0N7 80 aa11.4□□□□□ -0.58
PPP4R3A-202ENST00000554390 BPY2O14599 106 aa11.4□□□□□ -0.59
PPP4R3A-202ENST00000554390 IGLV6-57P01721 117 aa11.4□□□□□ -0.59
PPP4R3A-202ENST00000554390 NOTCH1P46531 2555 aa11.39□□□□□ -0.59
PPP4R3A-202ENST00000554390 MPLKIPQ8TAP9 179 aa11.39□□□□□ -0.59
PPP4R3A-202ENST00000554390 A0A0U1RQV1 116 aa11.38□□□□□ -0.59
PPP4R3A-202ENST00000554390 SPAG11BQ08648 103 aa11.37□□□□□ -0.59
PPP4R3A-202ENST00000554390 MAST4O15021 2626 aa11.37□□□□□ -0.59
PPP4R3A-202ENST00000554390 CYSRT1A8MQ03 144 aa11.37□□□□□ -0.59
PPP4R3A-202ENST00000554390 DAD1P61803 113 aa11.36□□□□□ -0.59
PPP4R3A-202ENST00000554390 Q8N9L7 120 aa11.36□□□□□ -0.59
PPP4R3A-202ENST00000554390 H3BQ85 93 aa11.35□□□□□ -0.59
PPP4R3A-202ENST00000554390 HIGD2BQ4VC39 106 aa11.35□□□□□ -0.59
PPP4R3A-202ENST00000554390 FLNBO75369 2602 aaKnown RBP11.35□□□□□ -0.59
PPP4R3A-202ENST00000554390 STAB1Q9NY15 2570 aa11.34□□□□□ -0.59
PPP4R3A-202ENST00000554390 LINC00612Q8N6U2 182 aa11.34□□□□□ -0.59
PPP4R3A-202ENST00000554390 DIRC1Q969H9 104 aa11.34□□□□□ -0.59
PPP4R3A-202ENST00000554390 ERC2-IT1O76042 136 aa11.32□□□□□ -0.6
PPP4R3A-202ENST00000554390 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.32□□□□□ -0.6
PPP4R3A-202ENST00000554390 F8WDY8 70 aa11.31□□□□□ -0.6
PPP4R3A-202ENST00000554390 PRYO14603 147 aa11.31□□□□□ -0.6
PPP4R3A-202ENST00000554390 C1orf195Q5TG92 126 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms