RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 DNAH2Q9P225 4427 aa4.93□□□□□ -1.62
TDP1-209ENST00000554180 C16orf90A8MZG2 172 aa4.93□□□□□ -1.62
TDP1-209ENST00000554180 BATFQ16520 125 aa4.93□□□□□ -1.62
TDP1-209ENST00000554180 GAGE2EQ4V326 116 aa4.93□□□□□ -1.62
TDP1-209ENST00000554180 XAGE1AQ9HD64 81 aa4.93□□□□□ -1.62
TDP1-209ENST00000554180 NHP2Q9NX24 153 aaKnown RBP4.93□□□□□ -1.62
TDP1-209ENST00000554180 PGPEP1Q9NXJ5 209 aa4.93□□□□□ -1.62
TDP1-209ENST00000554180 SACSQ9NZJ4 4579 aa4.93□□□□□ -1.62
TDP1-209ENST00000554180 LINC00474Q9P2X8 69 aa4.93□□□□□ -1.62
TDP1-209ENST00000554180 GAGE2DQ9UEU5 116 aa4.93□□□□□ -1.62
TDP1-209ENST00000554180 IGLV5-52A0A0A0MRZ9 124 aa4.92□□□□□ -1.62
TDP1-209ENST00000554180 COL5A1-AS1Q5SY13 56 aa4.92□□□□□ -1.62
TDP1-209ENST00000554180 C9orf129Q5T035 196 aaKnown RBP4.92□□□□□ -1.62
TDP1-209ENST00000554180 SDIM1Q6ZPB5 146 aa4.92□□□□□ -1.62
TDP1-209ENST00000554180 PLA2G2DQ9UNK4 145 aa4.92□□□□□ -1.62
TDP1-209ENST00000554180 FRAS1Q86XX4 4008 aa4.91□□□□□ -1.62
TDP1-209ENST00000554180 TRAV13-2A0A0B4J235 113 aa4.91□□□□□ -1.62
TDP1-209ENST00000554180 TRBV10-2A0A0K0K1G8 114 aa4.91□□□□□ -1.62
TDP1-209ENST00000554180 CFC1BP0CG36 223 aa4.91□□□□□ -1.62
TDP1-209ENST00000554180 CFC1P0CG37 223 aa4.91□□□□□ -1.62
TDP1-209ENST00000554180 RAB37Q96AX2 223 aa4.91□□□□□ -1.62
TDP1-209ENST00000554180 PRO1854Q9UHT4 67 aa4.91□□□□□ -1.62
TDP1-209ENST00000554180 DNAH17Q9UFH2 4485 aa4.9□□□□□ -1.62
TDP1-209ENST00000554180 IGLV5-37A0A075B6J1 123 aa4.9□□□□□ -1.63
TDP1-209ENST00000554180 IGKV2-28A0A075B6P5 120 aa4.9□□□□□ -1.63
TDP1-209ENST00000554180 A0A096LNI7 61 aa4.9□□□□□ -1.63
TDP1-209ENST00000554180 IGKV2D-28P01615 120 aa4.9□□□□□ -1.63
TDP1-209ENST00000554180 VPREB1P12018 145 aa4.9□□□□□ -1.63
TDP1-209ENST00000554180 GAGE2BQ13066 116 aa4.9□□□□□ -1.63
TDP1-209ENST00000554180 KMT2CQ8NEZ4 4911 aaKnown RBP4.89□□□□□ -1.63
TDP1-209ENST00000554180 K7ERJ3 54 aa4.89□□□□□ -1.63
TDP1-209ENST00000554180 LINC00337Q8N6G1 96 aa4.89□□□□□ -1.63
TDP1-209ENST00000554180 Q8NDZ9 215 aa4.89□□□□□ -1.63
TDP1-209ENST00000554180 HECTD4Q9Y4D8 3996 aa4.89□□□□□ -1.63
TDP1-209ENST00000554180 IGKV2-24A0A0C4DH68 120 aa4.88□□□□□ -1.63
TDP1-209ENST00000554180 M0R378 163 aa4.88□□□□□ -1.63
TDP1-209ENST00000554180 RPL13AP40429 203 aaKnown RBP4.88□□□□□ -1.63
TDP1-209ENST00000554180 KRTAP10-2P60368 255 aa4.88□□□□□ -1.63
TDP1-209ENST00000554180 NKAPP1Q8N9T2 125 aa4.88□□□□□ -1.63
TDP1-209ENST00000554180 TMEM126AQ9H061 195 aa4.88□□□□□ -1.63
TDP1-209ENST00000554180 CBY1Q9Y3M2 126 aa4.88□□□□□ -1.63
TDP1-209ENST00000554180 FAT2Q9NYQ8 4349 aa4.88□□□□□ -1.63
TDP1-209ENST00000554180 TAX1BP3O14907 124 aa4.87□□□□□ -1.63
TDP1-209ENST00000554180 NCR3O14931 201 aa4.87□□□□□ -1.63
TDP1-209ENST00000554180 IGLV6-57P01721 117 aa4.87□□□□□ -1.63
TDP1-209ENST00000554180 LINC01620Q4KN68 170 aa4.87□□□□□ -1.63
TDP1-209ENST00000554180 SERTAD4-AS1Q5TG53 156 aa4.87□□□□□ -1.63
TDP1-209ENST00000554180 SPACA4Q8TDM5 124 aa4.87□□□□□ -1.63
TDP1-209ENST00000554180 A0A1B0GVY2 172 aa4.86□□□□□ -1.63
TDP1-209ENST00000554180 C9orf118A6NHY6 69 aa4.86□□□□□ -1.63
TDP1-209ENST00000554180 EPM2AB3EWF7 344 aa4.86□□□□□ -1.63
TDP1-209ENST00000554180 TSPAN13O95857 204 aa4.86□□□□□ -1.63
TDP1-209ENST00000554180 CHTF8P0CG12 524 aa4.86□□□□□ -1.63
TDP1-209ENST00000554180 Q1RN00 199 aa4.86□□□□□ -1.63
TDP1-209ENST00000554180 S100A7L2Q5SY68 101 aa4.86□□□□□ -1.63
TDP1-209ENST00000554180 FAM19A5Q7Z5A7 132 aaPredicted RBP4.86□□□□□ -1.63
TDP1-209ENST00000554180 RYR2Q92736 4967 aa4.86□□□□□ -1.63
TDP1-209ENST00000554180 TRBV10-3A0A0K0K1G6 114 aa4.85□□□□□ -1.63
TDP1-209ENST00000554180 FAM168BA1KXE4 195 aa4.85□□□□□ -1.63
TDP1-209ENST00000554180 M0QXV9 152 aa4.85□□□□□ -1.63
TDP1-209ENST00000554180 RPL28P46779 137 aaKnown RBP4.85□□□□□ -1.63
TDP1-209ENST00000554180 PRR3P79522 188 aaKnown RBP4.85□□□□□ -1.63
TDP1-209ENST00000554180 LYRM7Q5U5X0 104 aa4.85□□□□□ -1.63
TDP1-209ENST00000554180 MRPL55Q7Z7F7 128 aaKnown RBP4.85□□□□□ -1.63
TDP1-209ENST00000554180 KRTAP7-1Q8IUC3 87 aa4.85□□□□□ -1.63
TDP1-209ENST00000554180 OR13C6PQ8NH95 151 aa4.85□□□□□ -1.63
TDP1-209ENST00000554180 C22orf24Q9Y442 160 aa4.85□□□□□ -1.63
TDP1-209ENST00000554180 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.85□□□□□ -1.63
TDP1-209ENST00000554180 HYDINQ4G0P3 5121 aa4.85□□□□□ -1.63
TDP1-209ENST00000554180 A0A1W2PNN7 141 aa4.84□□□□□ -1.63
TDP1-209ENST00000554180 H7C2G1 150 aa4.84□□□□□ -1.63
TDP1-209ENST00000554180 FUSP35637 526 aaKnown RBP eCLIP4.84□□□□□ -1.63
TDP1-209ENST00000554180 Q6ZSA8 131 aa4.84□□□□□ -1.63
TDP1-209ENST00000554180 C7orf33Q8WU49 177 aa4.84□□□□□ -1.63
TDP1-209ENST00000554180 PLAC8Q9NZF1 115 aa4.84□□□□□ -1.63
TDP1-209ENST00000554180 TRAV23DV6A0A075B6W5 121 aa4.83□□□□□ -1.64
TDP1-209ENST00000554180 A0A087WYN8 130 aa4.83□□□□□ -1.64
TDP1-209ENST00000554180 H3BUT2 72 aa4.83□□□□□ -1.64
TDP1-209ENST00000554180 PANO1I0J062 215 aa4.83□□□□□ -1.64
TDP1-209ENST00000554180 COX6CP09669 75 aa4.83□□□□□ -1.64
TDP1-209ENST00000554180 SMIM11BQ8TCY0 68 aa4.83□□□□□ -1.64
TDP1-209ENST00000554180 KCNQ1DNQ9H478 68 aa4.83□□□□□ -1.64
TDP1-209ENST00000554180 DNAH11Q96DT5 4516 aa4.83□□□□□ -1.64
TDP1-209ENST00000554180 IGLV1-50A0A075B6I6 118 aa4.82□□□□□ -1.64
TDP1-209ENST00000554180 TRBV7-6A0A0J9YX20 115 aa4.82□□□□□ -1.64
TDP1-209ENST00000554180 A0A1W2PPM0 123 aa4.82□□□□□ -1.64
TDP1-209ENST00000554180 J3QL48 77 aa4.82□□□□□ -1.64
TDP1-209ENST00000554180 PRYO14603 147 aa4.82□□□□□ -1.64
TDP1-209ENST00000554180 TRIAP1O43715 76 aa4.82□□□□□ -1.64
TDP1-209ENST00000554180 FABP2P12104 132 aa4.82□□□□□ -1.64
TDP1-209ENST00000554180 PSMB2P49721 201 aa4.82□□□□□ -1.64
TDP1-209ENST00000554180 KRTAP10-1P60331 282 aa4.82□□□□□ -1.64
TDP1-209ENST00000554180 C21orf62-AS1Q17RA5 79 aa4.82□□□□□ -1.64
TDP1-209ENST00000554180 DPH3Q96FX2 82 aa4.82□□□□□ -1.64
TDP1-209ENST00000554180 LINC00167Q96N53 147 aa4.82□□□□□ -1.64
TDP1-209ENST00000554180 GAGE10A6NGK3 116 aa4.81□□□□□ -1.64
TDP1-209ENST00000554180 H0YGX0 51 aa4.81□□□□□ -1.64
TDP1-209ENST00000554180 ZNF73O43830 326 aaPredicted RBP4.81□□□□□ -1.64
TDP1-209ENST00000554180 DIRC1Q969H9 104 aa4.81□□□□□ -1.64
TDP1-209ENST00000554180 NAA38Q9BRA0 125 aaKnown RBP4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms